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| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for SLC9A7P1 |
 Gene summary |
| Gene information | Gene symbol | SLC9A7P1 | Gene ID | 121456 |
| Gene name | solute carrier family 9 member 7 pseudogene 1 | |
| Synonyms | - | |
| Cytomap | 12q23.1 | |
| Type of gene | pseudo | |
| Description | solute carrier family 9 (sodium/hydrogen exchanger), member 7 pseudogene 1solute carrier family 9, subfamily A (NHE7, cation proton antiporter 7), member 7 pseudogene 1 | |
| Modification date | 20200313 | |
| UniProtAcc | ||
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
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RNA A-to-I events for SLC9A7P1 |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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| RNA editing frequencies across three data sets. |
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| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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| RNA A-to-I editing events in AD. |
| ADediting_378621(98453906, -), ADediting_378622(98453951, -), ADediting_378623(98453955, -), ADediting_378624(98453956, -), ADediting_378625(98453964, -), ADediting_378626(98453967, -), ADediting_378627(98453970, -), ADediting_378628(98453974, -), ADediting_378629(98453987, -), ADediting_378630(98453991, -), ADediting_378631(98453997, -), ADediting_378632(98454002, -), ADediting_378633(98454005, -), ADediting_378634(98454006, -), ADediting_378635(98454028, -), ADediting_378636(98454031, -), ADediting_378637(98454033, -), ADediting_378638(98454034, -), ADediting_378639(98454035, -), ADediting_378640(98454036, -), ADediting_378641(98454037, -), ADediting_378642(98454038, -), ADediting_378643(98454041, -), ADediting_378644(98454052, -), ADediting_378645(98454054, -), ADediting_378646(98454060, -), ADediting_378647(98454062, -), ADediting_378648(98454063, -), ADediting_378649(98454072, -), ADediting_378650(98454077, -), ADediting_378651(98454078, -), ADediting_378652(98454086, -), ADediting_378653(98454091, -), ADediting_378654(98454126, -), ADediting_378655(98454131, -), ADediting_378656(98454132, -), ADediting_378657(98454140, -), |
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RNA editing positional annotations for SLC9A7P1 using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_378621 | chr12_98453906_- | ncRNA_exonic |
| ADediting_378622 | chr12_98453951_- | ncRNA_exonic |
| ADediting_378623 | chr12_98453955_- | ncRNA_exonic |
| ADediting_378624 | chr12_98453956_- | ncRNA_exonic |
| ADediting_378625 | chr12_98453964_- | ncRNA_exonic |
| ADediting_378626 | chr12_98453967_- | ncRNA_exonic |
| ADediting_378627 | chr12_98453970_- | ncRNA_exonic |
| ADediting_378628 | chr12_98453974_- | ncRNA_exonic |
| ADediting_378629 | chr12_98453987_- | ncRNA_exonic |
| ADediting_378630 | chr12_98453991_- | ncRNA_exonic |
| ADediting_378631 | chr12_98453997_- | ncRNA_exonic |
| ADediting_378632 | chr12_98454002_- | ncRNA_exonic |
| ADediting_378633 | chr12_98454005_- | ncRNA_exonic |
| ADediting_378634 | chr12_98454006_- | ncRNA_exonic |
| ADediting_378635 | chr12_98454028_- | ncRNA_exonic |
| ADediting_378636 | chr12_98454031_- | ncRNA_exonic |
| ADediting_378637 | chr12_98454033_- | ncRNA_exonic |
| ADediting_378638 | chr12_98454034_- | ncRNA_exonic |
| ADediting_378639 | chr12_98454035_- | ncRNA_exonic |
| ADediting_378640 | chr12_98454036_- | ncRNA_exonic |
| ADediting_378641 | chr12_98454037_- | ncRNA_exonic |
| ADediting_378642 | chr12_98454038_- | ncRNA_exonic |
| ADediting_378643 | chr12_98454041_- | ncRNA_exonic |
| ADediting_378644 | chr12_98454052_- | ncRNA_exonic |
| ADediting_378645 | chr12_98454054_- | ncRNA_exonic |
| ADediting_378646 | chr12_98454060_- | ncRNA_exonic |
| ADediting_378647 | chr12_98454062_- | ncRNA_exonic |
| ADediting_378648 | chr12_98454063_- | ncRNA_exonic |
| ADediting_378649 | chr12_98454072_- | ncRNA_exonic |
| ADediting_378650 | chr12_98454077_- | ncRNA_exonic |
| ADediting_378651 | chr12_98454078_- | ncRNA_exonic |
| ADediting_378652 | chr12_98454086_- | ncRNA_exonic |
| ADediting_378653 | chr12_98454091_- | ncRNA_exonic |
| ADediting_378654 | chr12_98454126_- | ncRNA_exonic |
| ADediting_378655 | chr12_98454131_- | ncRNA_exonic |
| ADediting_378656 | chr12_98454132_- | ncRNA_exonic |
| ADediting_378657 | chr12_98454140_- | ncRNA_exonic |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_378621 | chr12_98453906_- | SINE | Alu | Name=AluSq |
| ADediting_378622 | chr12_98453951_- | SINE | Alu | Name=AluSq |
| ADediting_378623 | chr12_98453955_- | SINE | Alu | Name=AluSq |
| ADediting_378624 | chr12_98453956_- | SINE | Alu | Name=AluSq |
| ADediting_378625 | chr12_98453964_- | SINE | Alu | Name=AluSq |
| ADediting_378626 | chr12_98453967_- | SINE | Alu | Name=AluSq |
| ADediting_378627 | chr12_98453970_- | SINE | Alu | Name=AluSq |
| ADediting_378628 | chr12_98453974_- | SINE | Alu | Name=AluSq |
| ADediting_378629 | chr12_98453987_- | SINE | Alu | Name=AluSq |
| ADediting_378630 | chr12_98453991_- | SINE | Alu | Name=AluSq |
| ADediting_378631 | chr12_98453997_- | SINE | Alu | Name=AluSq |
| ADediting_378632 | chr12_98454002_- | SINE | Alu | Name=AluSq |
| ADediting_378633 | chr12_98454005_- | SINE | Alu | Name=AluSq |
| ADediting_378634 | chr12_98454006_- | SINE | Alu | Name=AluSq |
| ADediting_378635 | chr12_98454028_- | SINE | Alu | Name=AluSq |
| ADediting_378636 | chr12_98454031_- | SINE | Alu | Name=AluSq |
| ADediting_378637 | chr12_98454033_- | SINE | Alu | Name=AluSq |
| ADediting_378638 | chr12_98454034_- | SINE | Alu | Name=AluSq |
| ADediting_378639 | chr12_98454035_- | SINE | Alu | Name=AluSq |
| ADediting_378640 | chr12_98454036_- | SINE | Alu | Name=AluSq |
| ADediting_378641 | chr12_98454037_- | SINE | Alu | Name=AluSq |
| ADediting_378642 | chr12_98454038_- | SINE | Alu | Name=AluSq |
| ADediting_378643 | chr12_98454041_- | SINE | Alu | Name=AluSq |
| ADediting_378644 | chr12_98454052_- | SINE | Alu | Name=AluSq |
| ADediting_378645 | chr12_98454054_- | SINE | Alu | Name=AluSq |
| ADediting_378646 | chr12_98454060_- | SINE | Alu | Name=AluSq |
| ADediting_378647 | chr12_98454062_- | SINE | Alu | Name=AluSq |
| ADediting_378648 | chr12_98454063_- | SINE | Alu | Name=AluSq |
| ADediting_378649 | chr12_98454072_- | SINE | Alu | Name=AluSq |
| ADediting_378650 | chr12_98454077_- | SINE | Alu | Name=AluSq |
| ADediting_378651 | chr12_98454078_- | SINE | Alu | Name=AluSq |
| ADediting_378652 | chr12_98454086_- | SINE | Alu | Name=AluSq |
| ADediting_378653 | chr12_98454091_- | SINE | Alu | Name=AluSq |
| ADediting_378654 | chr12_98454126_- | SINE | Alu | Name=AluSq |
| ADediting_378655 | chr12_98454131_- | SINE | Alu | Name=AluSq |
| ADediting_378656 | chr12_98454132_- | SINE | Alu | Name=AluSq |
| ADediting_378657 | chr12_98454140_- | SINE | Alu | Name=AluSq |
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RNA A-to-I editing events in the alternative splicing sites for SLC9A7P1 |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for SLC9A7P1 |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
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Protein coding region RNA A-to-I editings for SLC9A7P1 |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
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The effects of the RNA editing to the miRNA binding sites for SLC9A7P1 |
| RNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. |
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| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_378621 | chr12_98453906_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-11401 | chr12 | 98453901 | 98453907 | 7mer-m8 | 98453900 | 98453920 | 155 | -20.32 |
| ADediting_378623 | chr12_98453955_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-10400-3p | chr12 | 98453951 | 98453957 | 7mer-m8 | 98453950 | 98453969 | 149 | -24.23 |
| ADediting_378623 | chr12_98453955_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-371a-5p | chr12 | 98453955 | 98453961 | 7mer-m8 | 98453954 | 98453973 | 143 | -10.01 |
| ADediting_378623 | chr12_98453955_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-4437 | chr12 | 98453951 | 98453958 | 8mer-1a | 98453951 | 98453971 | 142 | -17.49 |
| ADediting_378623 | chr12_98453955_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-4674 | chr12 | 98453951 | 98453957 | 7mer-m8 | 98453950 | 98453969 | 148 | -23.54 |
| ADediting_378625 | chr12_98453964_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-4431 | chr12 | 98453961 | 98453967 | 7mer-m8 | 98453960 | 98453981 | 140 | -14.06 |
| ADediting_378626 | chr12_98453967_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-6752-3p | chr12 | 98453967 | 98453973 | 7mer-m8 | 98453966 | 98453985 | 153 | -29.18 |
| ADediting_378626 | chr12_98453967_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-6801-3p | chr12 | 98453965 | 98453972 | 8mer-1a | 98453965 | 98453984 | 156 | -22.45 |
| ADediting_378626 | chr12_98453967_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-6810-3p | chr12 | 98453965 | 98453972 | 8mer-1a | 98453965 | 98453986 | 158 | -29.35 |
| ADediting_378628 | chr12_98453974_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-1913 | chr12 | 98453969 | 98453975 | 7mer-m8 | 98453968 | 98453989 | 147 | -22.51 |
| ADediting_378628 | chr12_98453974_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-210-5p | chr12 | 98453970 | 98453977 | 8mer-1a | 98453970 | 98453991 | 155 | -26.78 |
| ADediting_378628 | chr12_98453974_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-6747-3p | chr12 | 98453974 | 98453980 | 7mer-m8 | 98453973 | 98453993 | 151 | -23.59 |
| ADediting_378628 | chr12_98453974_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-6752-3p | chr12 | 98453973 | 98453979 | 7mer-m8 | 98453972 | 98453993 | 151 | -24.23 |
| ADediting_378628 | chr12_98453974_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-6801-3p | chr12 | 98453972 | 98453978 | 7mer-m8 | 98453971 | 98453990 | 158 | -25.92 |
| ADediting_378628 | chr12_98453974_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-6810-3p | chr12 | 98453972 | 98453978 | 7mer-m8 | 98453971 | 98453994 | 155 | -25.25 |
| ADediting_378629 | chr12_98453987_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-1207-3p | chr12 | 98453987 | 98453993 | 7mer-m8 | 98453986 | 98454003 | 140 | -12.56 |
| ADediting_378629 | chr12_98453987_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-646 | chr12 | 98453985 | 98453991 | 7mer-m8 | 98453984 | 98454002 | 149 | -21.2 |
| ADediting_378631 | chr12_98453997_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-4761-5p | chr12 | 98453996 | 98454003 | 8mer-1a | 98453996 | 98454022 | 152 | -25.26 |
| ADediting_378632 | chr12_98454002_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-524-3p | chr12 | 98453997 | 98454004 | 8mer-1a | 98453997 | 98454017 | 157 | -21.09 |
| ADediting_378632 | chr12_98454002_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-525-3p | chr12 | 98453997 | 98454004 | 8mer-1a | 98453997 | 98454018 | 161 | -21.62 |
| ADediting_378633 | chr12_98454005_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-1271-3p | chr12 | 98454001 | 98454007 | 7mer-m8 | 98454000 | 98454022 | 167 | -31.22 |
| ADediting_378633 | chr12_98454005_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-4722-3p | chr12 | 98454004 | 98454010 | 7mer-m8 | 98454003 | 98454022 | 156 | -25.34 |
| ADediting_378633 | chr12_98454005_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-4763-5p | chr12 | 98454002 | 98454009 | 8mer-1a | 98454002 | 98454021 | 157 | -23.47 |
| ADediting_378633 | chr12_98454005_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-550a-3-5p | chr12 | 98454001 | 98454007 | 7mer-m8 | 98454000 | 98454019 | 140 | -13.4 |
| ADediting_378633 | chr12_98454005_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-550a-5p | chr12 | 98454001 | 98454007 | 7mer-m8 | 98454000 | 98454022 | 140 | -21.63 |
| ADediting_378633 | chr12_98454005_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-6727-3p | chr12 | 98454004 | 98454010 | 7mer-m8 | 98454003 | 98454022 | 157 | -23.87 |
| ADediting_378633 | chr12_98454005_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-6894-3p | chr12 | 98454002 | 98454008 | 7mer-m8 | 98454001 | 98454022 | 152 | -20.22 |
| ADediting_378634 | chr12_98454006_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-6788-3p | chr12 | 98454005 | 98454011 | 7mer-m8 | 98454004 | 98454026 | 154 | -21.95 |
| ADediting_378635 | chr12_98454028_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-4742-3p | chr12 | 98454027 | 98454034 | 8mer-1a | 98454027 | 98454049 | 142 | -9.18 |
| ADediting_378636 | chr12_98454031_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-153-5p | chr12 | 98454031 | 98454037 | 7mer-m8 | 98454030 | 98454051 | 140 | -6.83 |
| ADediting_378636 | chr12_98454031_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-3680-3p | chr12 | 98454027 | 98454033 | 7mer-m8 | 98454026 | 98454048 | 140 | -12.48 |
| ADediting_378639 | chr12_98454035_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-630 | chr12 | 98454029 | 98454036 | 8mer-1a | 98454029 | 98454050 | 164 | -15.52 |
| ADediting_378641 | chr12_98454037_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-325 | chr12 | 98454036 | 98454043 | 8mer-1a | 98454036 | 98454058 | 141 | -10.26 |
| ADediting_378642 | chr12_98454038_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-222-5p | chr12 | 98454036 | 98454043 | 8mer-1a | 98454036 | 98454057 | 140 | -9.13 |
| ADediting_378642 | chr12_98454038_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-30a-3p | chr12 | 98454034 | 98454041 | 8mer-1a | 98454034 | 98454058 | 150 | -12.52 |
| ADediting_378642 | chr12_98454038_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-30d-3p | chr12 | 98454034 | 98454041 | 8mer-1a | 98454034 | 98454056 | 149 | -12.11 |
| ADediting_378642 | chr12_98454038_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-30e-3p | chr12 | 98454034 | 98454041 | 8mer-1a | 98454034 | 98454058 | 150 | -14.55 |
| ADediting_378642 | chr12_98454038_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-936 | chr12 | 98454037 | 98454044 | 8mer-1a | 98454037 | 98454059 | 159 | -22.47 |
| ADediting_378643 | chr12_98454041_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-374b-3p | chr12 | 98454036 | 98454043 | 8mer-1a | 98454036 | 98454058 | 147 | -12.57 |
| ADediting_378644 | chr12_98454052_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-412-3p | chr12 | 98454052 | 98454058 | 7mer-m8 | 98454051 | 98454073 | 153 | -17.3 |
| ADediting_378644 | chr12_98454052_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-4508 | chr12 | 98454047 | 98454053 | 7mer-m8 | 98454046 | 98454062 | 140 | -21.85 |
| ADediting_378644 | chr12_98454052_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-6754-3p | chr12 | 98454052 | 98454058 | 7mer-m8 | 98454051 | 98454071 | 144 | -15.76 |
| ADediting_378645 | chr12_98454054_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-23a-5p | chr12 | 98454049 | 98454055 | 7mer-m8 | 98454048 | 98454070 | 144 | -21.43 |
| ADediting_378645 | chr12_98454054_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-23b-5p | chr12 | 98454049 | 98454055 | 7mer-m8 | 98454048 | 98454068 | 156 | -19.96 |
| ADediting_378646 | chr12_98454060_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-1306-3p | chr12 | 98454060 | 98454066 | 7mer-m8 | 98454059 | 98454076 | 152 | -23.71 |
| ADediting_378647 | chr12_98454062_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-3190-5p | chr12 | 98454062 | 98454068 | 7mer-m8 | 98454061 | 98454080 | 152 | -19.64 |
| ADediting_378650 | chr12_98454077_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-12113 | chr12 | 98454077 | 98454083 | 7mer-m8 | 98454076 | 98454099 | 154 | -20.33 |
| ADediting_378650 | chr12_98454077_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-4539 | chr12 | 98454077 | 98454083 | 7mer-m8 | 98454076 | 98454095 | 151 | -20.36 |
| ADediting_378654 | chr12_98454126_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-371a-3p | chr12 | 98454121 | 98454127 | 7mer-m8 | 98454120 | 98454142 | 145 | -17.36 |
| ADediting_378655 | chr12_98454131_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-8052 | chr12 | 98454126 | 98454132 | 7mer-1a | 98454126 | 98454144 | 140 | -24.15 |
| ADediting_378656 | chr12_98454132_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-513a-5p | chr12 | 98454131 | 98454137 | 7mer-m8 | 98454130 | 98454147 | 144 | -15.6 |
| ADediting_378656 | chr12_98454132_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-638 | chr12 | 98454126 | 98454132 | 7mer-1a | 98454126 | 98454150 | 156 | -34.06 |
| ADediting_378657 | chr12_98454140_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-4634 | chr12 | 98454136 | 98454142 | 7mer-m8 | 98454135 | 98454158 | 147 | -29.55 |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_378622 | chr12_98453951_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-1343-3p | chr12 | 98453948 | 98453954 | 7mer-m8 | 98453947 | 98453970 | 146 | -24.15 |
| ADediting_378622 | chr12_98453951_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-6742-3p | chr12 | 98453948 | 98453955 | 8mer-1a | 98453948 | 98453967 | 145 | -14.93 |
| ADediting_378622 | chr12_98453951_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-6783-3p | chr12 | 98453948 | 98453954 | 7mer-m8 | 98453947 | 98453967 | 146 | -17.13 |
| ADediting_378627 | chr12_98453970_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-6747-3p | chr12 | 98453967 | 98453974 | 8mer-1a | 98453967 | 98453988 | 150 | -25.48 |
| ADediting_378628 | chr12_98453974_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-5001-3p | chr12 | 98453974 | 98453980 | 7mer-m8 | 98453973 | 98453991 | 154 | -23 |
| ADediting_378629 | chr12_98453987_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-562 | chr12 | 98453984 | 98453990 | 7mer-m8 | 98453983 | 98454002 | 150 | -12.47 |
| ADediting_378629 | chr12_98453987_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-5697 | chr12 | 98453983 | 98453989 | 7mer-m8 | 98453982 | 98454001 | 149 | -18.13 |
| ADediting_378630 | chr12_98453991_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-5089-5p | chr12 | 98453991 | 98453997 | 7mer-m8 | 98453990 | 98454011 | 141 | -12.61 |
| ADediting_378630 | chr12_98453991_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-6506-5p | chr12 | 98453990 | 98453996 | 7mer-m8 | 98453989 | 98454011 | 140 | -15 |
| ADediting_378632 | chr12_98454002_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-18a-5p | chr12 | 98453997 | 98454004 | 8mer-1a | 98453997 | 98454020 | 148 | -16.41 |
| ADediting_378632 | chr12_98454002_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-18b-5p | chr12 | 98453997 | 98454004 | 8mer-1a | 98453997 | 98454020 | 148 | -16.41 |
| ADediting_378632 | chr12_98454002_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-4735-3p | chr12 | 98453997 | 98454004 | 8mer-1a | 98453997 | 98454017 | 145 | -13.01 |
| ADediting_378634 | chr12_98454006_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-4715-3p | chr12 | 98454005 | 98454012 | 8mer-1a | 98454005 | 98454027 | 147 | -18.17 |
| ADediting_378643 | chr12_98454041_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-6832-5p | chr12 | 98454040 | 98454046 | 7mer-m8 | 98454039 | 98454061 | 142 | -16.66 |
| ADediting_378644 | chr12_98454052_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-193b-5p | chr12 | 98454048 | 98454054 | 7mer-m8 | 98454047 | 98454068 | 142 | -20.42 |
| ADediting_378646 | chr12_98454060_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-4716-5p | chr12 | 98454057 | 98454063 | 7mer-m8 | 98454056 | 98454077 | 140 | -11.3 |
| ADediting_378646 | chr12_98454060_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-4781-3p | chr12 | 98454059 | 98454065 | 7mer-m8 | 98454058 | 98454076 | 144 | -13.86 |
| ADediting_378647 | chr12_98454062_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-4716-5p | chr12 | 98454057 | 98454063 | 7mer-m8 | 98454056 | 98454077 | 140 | -11.3 |
| ADediting_378647 | chr12_98454062_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-4781-3p | chr12 | 98454059 | 98454065 | 7mer-m8 | 98454058 | 98454076 | 144 | -13.86 |
| ADediting_378648 | chr12_98454063_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-4435 | chr12 | 98454062 | 98454069 | 8mer-1a | 98454062 | 98454082 | 146 | -17.76 |
| ADediting_378648 | chr12_98454063_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-4781-3p | chr12 | 98454059 | 98454065 | 7mer-m8 | 98454058 | 98454076 | 144 | -13.86 |
| ADediting_378649 | chr12_98454072_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-3663-5p | chr12 | 98454071 | 98454077 | 7mer-m8 | 98454070 | 98454086 | 141 | -19.69 |
| ADediting_378649 | chr12_98454072_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-6131 | chr12 | 98454070 | 98454076 | 7mer-m8 | 98454069 | 98454087 | 140 | -17.94 |
| ADediting_378653 | chr12_98454091_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-4330 | chr12 | 98454090 | 98454096 | 7mer-m8 | 98454089 | 98454108 | 150 | -19.25 |
| ADediting_378654 | chr12_98454126_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-5089-5p | chr12 | 98454126 | 98454132 | 7mer-m8 | 98454125 | 98454147 | 148 | -14.13 |
| ADediting_378654 | chr12_98454126_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-512-3p | chr12 | 98454121 | 98454127 | 7mer-m8 | 98454120 | 98454141 | 149 | -15.51 |
| ADediting_378654 | chr12_98454126_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-6506-5p | chr12 | 98454125 | 98454131 | 7mer-m8 | 98454124 | 98454146 | 144 | -14.53 |
| ADediting_378655 | chr12_98454131_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-10399-5p | chr12 | 98454130 | 98454136 | 7mer-m8 | 98454129 | 98454153 | 141 | -14.54 |
| ADediting_378655 | chr12_98454131_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-5089-5p | chr12 | 98454126 | 98454132 | 7mer-m8 | 98454125 | 98454147 | 148 | -14.13 |
| ADediting_378655 | chr12_98454131_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-6504-3p | chr12 | 98454130 | 98454136 | 7mer-m8 | 98454129 | 98454150 | 141 | -11.98 |
| ADediting_378656 | chr12_98454132_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-10399-5p | chr12 | 98454130 | 98454136 | 7mer-m8 | 98454129 | 98454153 | 141 | -14.54 |
| ADediting_378656 | chr12_98454132_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-6504-3p | chr12 | 98454130 | 98454136 | 7mer-m8 | 98454129 | 98454150 | 141 | -11.98 |
| ADediting_378656 | chr12_98454132_- | ENSG00000227825.4 | ENST00000554295.1 | SLC9A7P1-201 | hsa-miR-7151-3p | chr12 | 98454131 | 98454138 | 8mer-1a | 98454131 | 98454151 | 144 | -19.91 |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| Differentially expressed gene-miRNA network |
| Differentially expressed lncRNA-miRNA network |
 |
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The effects of the RNA editing to the stability of the RNA structures for SLC9A7P1 |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| ENST00000554295.1 | lncRNA |  |  |
| RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| ADediting_378621 | ENST00000554295.1 | chr12_98453906_- | 3240 | -1112.30 | -1109.40 | -1149.30 |
| ADediting_378622 | ENST00000554295.1 | chr12_98453951_- | 3195 | -1108.70 | -1109.40 | -1149.30 |
| ADediting_378623 | ENST00000554295.1 | chr12_98453955_- | 3191 | -1113.10 | -1109.40 | -1149.30 |
| ADediting_378624 | ENST00000554295.1 | chr12_98453956_- | 3190 | -1110.80 | -1109.40 | -1149.30 |
| ADediting_378625 | ENST00000554295.1 | chr12_98453964_- | 3182 | -1110.50 | -1109.40 | -1149.30 |
| ADediting_378626 | ENST00000554295.1 | chr12_98453967_- | 3179 | -1110.90 | -1109.40 | -1149.30 |
| ADediting_378627 | ENST00000554295.1 | chr12_98453970_- | 3176 | -1112.50 | -1109.40 | -1149.30 |
| ADediting_378628 | ENST00000554295.1 | chr12_98453974_- | 3172 | -1112.10 | -1109.40 | -1149.30 |
| ADediting_378629 | ENST00000554295.1 | chr12_98453987_- | 3159 | -1109.40 | -1109.40 | -1149.30 |
| ADediting_378630 | ENST00000554295.1 | chr12_98453991_- | 3155 | -1109.20 | -1109.40 | -1149.30 |
| ADediting_378631 | ENST00000554295.1 | chr12_98453997_- | 3149 | -1110.40 | -1109.40 | -1149.30 |
| ADediting_378632 | ENST00000554295.1 | chr12_98454002_- | 3144 | -1111.60 | -1109.40 | -1149.30 |
| ADediting_378633 | ENST00000554295.1 | chr12_98454005_- | 3141 | -1109.50 | -1109.40 | -1149.30 |
| ADediting_378634 | ENST00000554295.1 | chr12_98454006_- | 3140 | -1109.10 | -1109.40 | -1149.30 |
| ADediting_378635 | ENST00000554295.1 | chr12_98454028_- | 3118 | -1110.10 | -1109.40 | -1149.30 |
| ADediting_378636 | ENST00000554295.1 | chr12_98454031_- | 3115 | -1109.30 | -1109.40 | -1149.30 |
| ADediting_378637 | ENST00000554295.1 | chr12_98454033_- | 3113 | -1111.80 | -1109.40 | -1149.30 |
| ADediting_378638 | ENST00000554295.1 | chr12_98454034_- | 3112 | -1111.30 | -1109.40 | -1149.30 |
| ADediting_378639 | ENST00000554295.1 | chr12_98454035_- | 3111 | -1110.90 | -1109.40 | -1149.30 |
| ADediting_378640 | ENST00000554295.1 | chr12_98454036_- | 3110 | -1111.00 | -1109.40 | -1149.30 |
| ADediting_378641 | ENST00000554295.1 | chr12_98454037_- | 3109 | -1110.30 | -1109.40 | -1149.30 |
| ADediting_378642 | ENST00000554295.1 | chr12_98454038_- | 3108 | -1110.50 | -1109.40 | -1149.30 |
| ADediting_378643 | ENST00000554295.1 | chr12_98454041_- | 3105 | -1112.70 | -1109.40 | -1149.30 |
| ADediting_378644 | ENST00000554295.1 | chr12_98454052_- | 3094 | -1111.70 | -1109.40 | -1149.30 |
| ADediting_378645 | ENST00000554295.1 | chr12_98454054_- | 3092 | -1113.90 | -1109.40 | -1149.30 |
| ADediting_378646 | ENST00000554295.1 | chr12_98454060_- | 3086 | -1111.60 | -1109.40 | -1149.30 |
| ADediting_378647 | ENST00000554295.1 | chr12_98454062_- | 3084 | -1110.20 | -1109.40 | -1149.30 |
| ADediting_378648 | ENST00000554295.1 | chr12_98454063_- | 3083 | -1111.70 | -1109.40 | -1149.30 |
| ADediting_378649 | ENST00000554295.1 | chr12_98454072_- | 3074 | -1113.20 | -1109.40 | -1149.30 |
| ADediting_378650 | ENST00000554295.1 | chr12_98454077_- | 3069 | -1109.40 | -1109.40 | -1149.30 |
| ADediting_378651 | ENST00000554295.1 | chr12_98454078_- | 3068 | -1109.30 | -1109.40 | -1149.30 |
| ADediting_378652 | ENST00000554295.1 | chr12_98454086_- | 3060 | -1108.70 | -1109.40 | -1149.30 |
| ADediting_378653 | ENST00000554295.1 | chr12_98454091_- | 3055 | -1110.60 | -1109.40 | -1149.30 |
| ADediting_378654 | ENST00000554295.1 | chr12_98454126_- | 3020 | -1112.00 | -1109.40 | -1149.30 |
| ADediting_378655 | ENST00000554295.1 | chr12_98454131_- | 3015 | -1109.40 | -1109.40 | -1149.30 |
| ADediting_378656 | ENST00000554295.1 | chr12_98454132_- | 3014 | -1109.40 | -1109.40 | -1149.30 |
| ADediting_378657 | ENST00000554295.1 | chr12_98454140_- | 3006 | -1112.00 | -1109.40 | -1149.30 |
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Relation with ADAR for SLC9A7P1 |
| Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| TCX | ADediting_378622 | chr12_98453951_- | 5.36935328449728e-06 | 0.361850242413275 | 1.82265079617448e-09 | 0.46623167274377 | 0.0669729708688384 | -0.149977856260222 |
| TCX | ADediting_378625 | chr12_98453964_- | 0.000551798524312896 | 0.278759486743967 | 4.39386585264266e-06 | 0.364959321958248 | 0.454201885728023 | -0.0615659376874043 |
| TCX | ADediting_378627 | chr12_98453970_- | 2.03997897925808e-05 | 0.340274135063087 | 5.53313556173102e-09 | 0.453669193786497 | 0.02358031547524 | -0.184797473273908 |
| TCX | ADediting_378631 | chr12_98453997_- | 0.000738418251475579 | 0.272602200033947 | 1.14844280063423e-06 | 0.384974986617134 | 0.0461713487620084 | -0.163067793423217 |
| TCX | ADediting_378635 | chr12_98454028_- | 3.56629262092497e-05 | 0.33075027749827 | 3.63891033410621e-07 | 0.401125273556787 | 0.106496899491461 | -0.13232078017969 |
| TCX | ADediting_378647 | chr12_98454062_- | 8.58590488426919e-07 | 0.389144128715957 | 5.38383377303303e-06 | 0.361808257000494 | 0.393012933718443 | -0.0702437954880787 |
| TCX | ADediting_378650 | chr12_98454077_- | 1.29435484269399e-05 | 0.347806744912083 | 3.05858932801751e-06 | 0.370495904270469 | 0.375725727328263 | -0.0728384012304904 |
| TCX | ADediting_378651 | chr12_98454078_- | 2.09172592505497e-05 | 0.33985366197665 | 1.88048714791697e-05 | 0.341636431285978 | 0.65732291971291 | -0.0365141662412039 |
| TCX | ADediting_378654 | chr12_98454126_- | 6.65783924559366e-05 | 0.319720068672107 | 0.0127466929190644 | 0.202947194126337 | 0.315439973832985 | 0.0825162709200326 |
| TCX | ADediting_378656 | chr12_98454132_- | 5.82835467704033e-08 | 0.42522112919129 | 2.07062615395407e-09 | 0.464814170050594 | 0.0907087200698126 | -0.138616322885002 |
| Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 1.08745855715042e-26 | 0.557281193211614 | 2.0281483210452e-12 | 0.3854396006732 | 5.0611472534345e-16 | 0.438817555244485 |
| AC | 2.41201245175481e-10 | 0.386748469629406 | 1.38436710589444e-10 | 0.391527588828973 | 0.887324116703554 | 0.00900627667428255 |
| PCC | 4.24150581582947e-19 | 0.587330571747604 | 5.1665109774331e-20 | 0.599379153812499 | 0.370685860858269 | 0.0651323677180499 |
| CER | 8.94153248010092e-17 | 0.611870424202146 | 0.000136753725236167 | 0.306446396037219 | 0.95788497753238 | 0.00434809953254659 |
| TCX | 1.46944394124182e-33 | 0.792234640149303 | 4.11487222625092e-33 | 0.788947879582178 | 0.0478977998421815 | -0.161812931941763 |
| FP | 2.09331533173769e-29 | 0.717149261104542 | 2.54124543799528e-33 | 0.749258966719547 | 0.365138805892693 | 0.068280630284927 |
| IFG | 1.45842119144409e-05 | 0.752032427902626 | 3.17821903306821e-05 | 0.73215406399887 | 0.714856036386347 | 0.0768969229500524 |
| PG | 1.17169165979379e-29 | 0.708454729685976 | 4.27230561599734e-33 | 0.736740233040605 | 0.00309814584051988 | -0.215772424923979 |
| STG | 1.55864215499406e-08 | 0.569643013102636 | 7.34550283660106e-07 | 0.509706006791583 | 0.0512942093082114 | -0.213395567815144 |
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Relation with AD stages for SLC9A7P1 |
| Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| IFG | ADediting_378650 | chr12_98454077_- | 0.0172300122047699 | -0.471923967298545 |
| Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
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RelatedDrugs for SLC9A7P1 |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for SLC9A7P1 |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
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