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![]() | Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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![]() | The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for ZNF554 |
Gene summary |
| Gene information | Gene symbol | ZNF554 | Gene ID | 115196 |
| Gene name | zinc finger protein 554 | |
| Synonyms | - | |
| Cytomap | 19p13.3 | |
| Type of gene | protein-coding | |
| Description | zinc finger protein 554 | |
| Modification date | 20200313 | |
| UniProtAcc | Q86TJ5, | |
| Context |
Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
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RNA A-to-I events for ZNF554 |
RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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RNA editing frequencies across three data sets. |
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The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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RNA A-to-I editing events in AD. |
| ADediting_735281(2822695, +), ADediting_735282(2825994, +), ADediting_735283(2826102, +), ADediting_735284(2826266, +), ADediting_735285(2826304, +), ADediting_735286(2826321, +), ADediting_735287(2826454, +), ADediting_735288(2826795, +), ADediting_735289(2826924, +), ADediting_735290(2828487, +), ADediting_735291(2828488, +), ADediting_735292(2828546, +), ADediting_735293(2828547, +), ADediting_735294(2828556, +), ADediting_735295(2828573, +), ADediting_735296(2828662, +), ADediting_735297(2829103, +), ADediting_735298(2829104, +), ADediting_735299(2829117, +), ADediting_735300(2829172, +), ADediting_735301(2829180, +), ADediting_735302(2829181, +), ADediting_735303(2829239, +), ADediting_735304(2829291, +), ADediting_735305(2829415, +), ADediting_735306(2829451, +), ADediting_735307(2829452, +), ADediting_735308(2829462, +), ADediting_735309(2829517, +), ADediting_735310(2829581, +), ADediting_735311(2829582, +), ADediting_735312(2829625, +), ADediting_735313(2830064, +), ADediting_735314(2830117, +), ADediting_735315(2830120, +), ADediting_735316(2830134, +), ADediting_735317(2830142, +), ADediting_735318(2830195, +), ADediting_735319(2830209, +), ADediting_735320(2830619, +), ADediting_735321(2830627, +), ADediting_735322(2830713, +), ADediting_735323(2830946, +), ADediting_735324(2830947, +), ADediting_735325(2830949, +), ADediting_735326(2831027, +), ADediting_735327(2831346, +), ADediting_735328(2835054, +), ADediting_735329(2835068, +), ADediting_735330(2835073, +), ADediting_735331(2835078, +), ADediting_735332(2835085, +), ADediting_735333(2835098, +), ADediting_735334(2835099, +), ADediting_735335(2835102, +), ADediting_735336(2835103, +), ADediting_735337(2835111, +), ADediting_735338(2835116, +), ADediting_735339(2835124, +), ADediting_735340(2835128, +), ADediting_735341(2835132, +), ADediting_735342(2835135, +), ADediting_735343(2835138, +), ADediting_735344(2835140, +), ADediting_735345(2835194, +), ADediting_735346(2835215, +), ADediting_735347(2835217, +), ADediting_735348(2835218, +), ADediting_735349(2835223, +), ADediting_735350(2835224, +), ADediting_735351(2835231, +), ADediting_735352(2835240, +), ADediting_735353(2835253, +), ADediting_735354(2835285, +), ADediting_735355(2835289, +), ADediting_735356(2835295, +), ADediting_735357(2835315, +), ADediting_735358(2835322, +), ADediting_735359(2835325, +), ADediting_735360(2835351, +), ADediting_735361(2835357, +), ADediting_735362(2835358, +), ADediting_735363(2835361, +), ADediting_735364(2835365, +), ADediting_735365(2835378, +), ADediting_735366(2835393, +), ADediting_735367(2835422, +), ADediting_735368(2835509, +), ADediting_735369(2835518, +), ADediting_735370(2835568, +), ADediting_735371(2835569, +), ADediting_735372(2835570, +), ADediting_735373(2835582, +), ADediting_735374(2835585, +), ADediting_735375(2835856, +), ADediting_735376(2835875, +), ADediting_735377(2835880, +), ADediting_735378(2835894, +), ADediting_735379(2835928, +), ADediting_735380(2835929, +), ADediting_735381(2835932, +), ADediting_735382(2835933, +), ADediting_735383(2835941, +), ADediting_735384(2835946, +), ADediting_735385(2835968, +), ADediting_735386(2835989, +), ADediting_735387(2835993, +), ADediting_735388(2836034, +), ADediting_735389(2836037, +), ADediting_735390(2836046, +), ADediting_735391(2836057, +), ADediting_735392(2836058, +), ADediting_735393(2836059, +), ADediting_735394(2836066, +), ADediting_735395(2836071, +), ADediting_735396(2836072, +), ADediting_735397(2836075, +), ADediting_735398(2836076, +), ADediting_735399(2836084, +), ADediting_735400(2836097, +), ADediting_735401(2836098, +), ADediting_735402(2836099, +), ADediting_735403(2836111, +), ADediting_1554561(2822699, +), ADediting_1554562(2822731, +), ADediting_1554563(2835868, +), |
Top |
RNA editing positional annotations for ZNF554 using Annovar |
Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| ADediting_735284 | chr19_2826266_+ | nonsynonymous SNV | ENST00000590116.5 | c.A143G | p.H48R | . | . | . |
| ADediting_735285 | chr19_2826304_+ | nonsynonymous SNV | ENST00000590116.5 | c.A181G | p.S61G | . | . | . |
| ADediting_735286 | chr19_2826321_+ | synonymous SNV | ENST00000590116.5 | c.A198G | p.S66S | . | . | . |
Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_735281 | chr19_2822695_+ | intronic |
| ADediting_735282 | chr19_2825994_+ | intronic |
| ADediting_735283 | chr19_2826102_+ | intronic |
| ADediting_735284 | chr19_2826266_+ | exonic |
| ADediting_735285 | chr19_2826304_+ | exonic |
| ADediting_735286 | chr19_2826321_+ | exonic |
| ADediting_735287 | chr19_2826454_+ | intronic |
| ADediting_735288 | chr19_2826795_+ | intronic |
| ADediting_735289 | chr19_2826924_+ | intronic |
| ADediting_735290 | chr19_2828487_+ | intronic |
| ADediting_735291 | chr19_2828488_+ | intronic |
| ADediting_735292 | chr19_2828546_+ | intronic |
| ADediting_735293 | chr19_2828547_+ | intronic |
| ADediting_735294 | chr19_2828556_+ | intronic |
| ADediting_735295 | chr19_2828573_+ | intronic |
| ADediting_735296 | chr19_2828662_+ | intronic |
| ADediting_735297 | chr19_2829103_+ | intronic |
| ADediting_735298 | chr19_2829104_+ | intronic |
| ADediting_735299 | chr19_2829117_+ | intronic |
| ADediting_735300 | chr19_2829172_+ | intronic |
| ADediting_735301 | chr19_2829180_+ | intronic |
| ADediting_735302 | chr19_2829181_+ | intronic |
| ADediting_735303 | chr19_2829239_+ | intronic |
| ADediting_735304 | chr19_2829291_+ | intronic |
| ADediting_735305 | chr19_2829415_+ | intronic |
| ADediting_735306 | chr19_2829451_+ | intronic |
| ADediting_735307 | chr19_2829452_+ | intronic |
| ADediting_735308 | chr19_2829462_+ | intronic |
| ADediting_735309 | chr19_2829517_+ | intronic |
| ADediting_735310 | chr19_2829581_+ | intronic |
| ADediting_735311 | chr19_2829582_+ | intronic |
| ADediting_735312 | chr19_2829625_+ | intronic |
| ADediting_735313 | chr19_2830064_+ | intronic |
| ADediting_735314 | chr19_2830117_+ | intronic |
| ADediting_735315 | chr19_2830120_+ | intronic |
| ADediting_735316 | chr19_2830134_+ | intronic |
| ADediting_735317 | chr19_2830142_+ | intronic |
| ADediting_735318 | chr19_2830195_+ | intronic |
| ADediting_735319 | chr19_2830209_+ | intronic |
| ADediting_735320 | chr19_2830619_+ | intronic |
| ADediting_735321 | chr19_2830627_+ | intronic |
| ADediting_735322 | chr19_2830713_+ | intronic |
| ADediting_735323 | chr19_2830946_+ | intronic |
| ADediting_735324 | chr19_2830947_+ | intronic |
| ADediting_735325 | chr19_2830949_+ | intronic |
| ADediting_735326 | chr19_2831027_+ | intronic |
| ADediting_735327 | chr19_2831346_+ | intronic |
| ADediting_735328 | chr19_2835054_+ | UTR3 |
| ADediting_735329 | chr19_2835068_+ | UTR3 |
| ADediting_735330 | chr19_2835073_+ | UTR3 |
| ADediting_735331 | chr19_2835078_+ | UTR3 |
| ADediting_735332 | chr19_2835085_+ | UTR3 |
| ADediting_735333 | chr19_2835098_+ | UTR3 |
| ADediting_735334 | chr19_2835099_+ | UTR3 |
| ADediting_735335 | chr19_2835102_+ | UTR3 |
| ADediting_735336 | chr19_2835103_+ | UTR3 |
| ADediting_735337 | chr19_2835111_+ | UTR3 |
| ADediting_735338 | chr19_2835116_+ | UTR3 |
| ADediting_735339 | chr19_2835124_+ | UTR3 |
| ADediting_735340 | chr19_2835128_+ | UTR3 |
| ADediting_735341 | chr19_2835132_+ | UTR3 |
| ADediting_735342 | chr19_2835135_+ | UTR3 |
| ADediting_735343 | chr19_2835138_+ | UTR3 |
| ADediting_735344 | chr19_2835140_+ | UTR3 |
| ADediting_735345 | chr19_2835194_+ | UTR3 |
| ADediting_735346 | chr19_2835215_+ | UTR3 |
| ADediting_735347 | chr19_2835217_+ | UTR3 |
| ADediting_735348 | chr19_2835218_+ | UTR3 |
| ADediting_735349 | chr19_2835223_+ | UTR3 |
| ADediting_735350 | chr19_2835224_+ | UTR3 |
| ADediting_735351 | chr19_2835231_+ | UTR3 |
| ADediting_735352 | chr19_2835240_+ | UTR3 |
| ADediting_735353 | chr19_2835253_+ | UTR3 |
| ADediting_735354 | chr19_2835285_+ | UTR3 |
| ADediting_735355 | chr19_2835289_+ | UTR3 |
| ADediting_735356 | chr19_2835295_+ | UTR3 |
| ADediting_735357 | chr19_2835315_+ | UTR3 |
| ADediting_735358 | chr19_2835322_+ | UTR3 |
| ADediting_735359 | chr19_2835325_+ | UTR3 |
| ADediting_735360 | chr19_2835351_+ | UTR3 |
| ADediting_735361 | chr19_2835357_+ | UTR3 |
| ADediting_735362 | chr19_2835358_+ | UTR3 |
| ADediting_735363 | chr19_2835361_+ | UTR3 |
| ADediting_735364 | chr19_2835365_+ | UTR3 |
| ADediting_735365 | chr19_2835378_+ | UTR3 |
| ADediting_735366 | chr19_2835393_+ | UTR3 |
| ADediting_735367 | chr19_2835422_+ | UTR3 |
| ADediting_735368 | chr19_2835509_+ | UTR3 |
| ADediting_735369 | chr19_2835518_+ | UTR3 |
| ADediting_735370 | chr19_2835568_+ | UTR3 |
| ADediting_735371 | chr19_2835569_+ | UTR3 |
| ADediting_735372 | chr19_2835570_+ | UTR3 |
| ADediting_735373 | chr19_2835582_+ | UTR3 |
| ADediting_735374 | chr19_2835585_+ | UTR3 |
| ADediting_735375 | chr19_2835856_+ | UTR3 |
| ADediting_735376 | chr19_2835875_+ | UTR3 |
| ADediting_735377 | chr19_2835880_+ | UTR3 |
| ADediting_735378 | chr19_2835894_+ | UTR3 |
| ADediting_735379 | chr19_2835928_+ | UTR3 |
| ADediting_735380 | chr19_2835929_+ | UTR3 |
| ADediting_735381 | chr19_2835932_+ | UTR3 |
| ADediting_735382 | chr19_2835933_+ | UTR3 |
| ADediting_735383 | chr19_2835941_+ | UTR3 |
| ADediting_735384 | chr19_2835946_+ | UTR3 |
| ADediting_735385 | chr19_2835968_+ | UTR3 |
| ADediting_735386 | chr19_2835989_+ | UTR3 |
| ADediting_735387 | chr19_2835993_+ | UTR3 |
| ADediting_735388 | chr19_2836034_+ | UTR3 |
| ADediting_735389 | chr19_2836037_+ | UTR3 |
| ADediting_735390 | chr19_2836046_+ | UTR3 |
| ADediting_735391 | chr19_2836057_+ | UTR3 |
| ADediting_735392 | chr19_2836058_+ | UTR3 |
| ADediting_735393 | chr19_2836059_+ | UTR3 |
| ADediting_735394 | chr19_2836066_+ | UTR3 |
| ADediting_735395 | chr19_2836071_+ | UTR3 |
| ADediting_735396 | chr19_2836072_+ | UTR3 |
| ADediting_735397 | chr19_2836075_+ | UTR3 |
| ADediting_735398 | chr19_2836076_+ | UTR3 |
| ADediting_735399 | chr19_2836084_+ | UTR3 |
| ADediting_735400 | chr19_2836097_+ | UTR3 |
| ADediting_735401 | chr19_2836098_+ | UTR3 |
| ADediting_735402 | chr19_2836099_+ | UTR3 |
| ADediting_735403 | chr19_2836111_+ | UTR3 |
| ADediting_1554561 | chr19_2822699_+ | intronic |
| ADediting_1554562 | chr19_2822731_+ | intronic |
| ADediting_1554563 | chr19_2835868_+ | UTR3 |
Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_735281 | chr19_2822695_+ | SINE | Alu | Name=AluJo |
| ADediting_735282 | chr19_2825994_+ | SINE | Alu | Name=AluSp |
| ADediting_735283 | chr19_2826102_+ | SINE | Alu | Name=AluSp |
| ADediting_735284 | chr19_2826266_+ | SINE | Alu | Name=AluSx3 |
| ADediting_735285 | chr19_2826304_+ | SINE | Alu | Name=AluSx3 |
| ADediting_735286 | chr19_2826321_+ | SINE | Alu | Name=AluSx3 |
| ADediting_735287 | chr19_2826454_+ | SINE | Alu | Name=AluSx3 |
| ADediting_735288 | chr19_2826795_+ | SINE | Alu | Name=AluY |
| ADediting_735289 | chr19_2826924_+ | SINE | Alu | Name=AluY |
| ADediting_735290 | chr19_2828487_+ | SINE | Alu | Name=AluSx1 |
| ADediting_735291 | chr19_2828488_+ | SINE | Alu | Name=AluSx1 |
| ADediting_735292 | chr19_2828546_+ | SINE | Alu | Name=AluSx1 |
| ADediting_735293 | chr19_2828547_+ | SINE | Alu | Name=AluSx1 |
| ADediting_735294 | chr19_2828556_+ | SINE | Alu | Name=AluSx1 |
| ADediting_735295 | chr19_2828573_+ | SINE | Alu | Name=AluSx1 |
| ADediting_735296 | chr19_2828662_+ | SINE | Alu | Name=AluSx1 |
| ADediting_735297 | chr19_2829103_+ | SINE | Alu | Name=AluSz6 |
| ADediting_735298 | chr19_2829104_+ | SINE | Alu | Name=AluSz6 |
| ADediting_735299 | chr19_2829117_+ | SINE | Alu | Name=AluSz6 |
| ADediting_735300 | chr19_2829172_+ | SINE | Alu | Name=AluSz6 |
| ADediting_735301 | chr19_2829180_+ | SINE | Alu | Name=AluSz6 |
| ADediting_735302 | chr19_2829181_+ | SINE | Alu | Name=AluSz6 |
| ADediting_735303 | chr19_2829239_+ | SINE | Alu | Name=AluSz6 |
| ADediting_735304 | chr19_2829291_+ | SINE | Alu | Name=AluSz6 |
| ADediting_735305 | chr19_2829415_+ | SINE | Alu | Name=AluSp |
| ADediting_735306 | chr19_2829451_+ | SINE | Alu | Name=AluSp |
| ADediting_735307 | chr19_2829452_+ | SINE | Alu | Name=AluSp |
| ADediting_735308 | chr19_2829462_+ | SINE | Alu | Name=AluSp |
| ADediting_735309 | chr19_2829517_+ | SINE | Alu | Name=AluSp |
| ADediting_735310 | chr19_2829581_+ | SINE | Alu | Name=AluSp |
| ADediting_735311 | chr19_2829582_+ | SINE | Alu | Name=AluSp |
| ADediting_735312 | chr19_2829625_+ | SINE | Alu | Name=AluSp |
| ADediting_735313 | chr19_2830064_+ | SINE | Alu | Name=AluY |
| ADediting_735314 | chr19_2830117_+ | SINE | Alu | Name=AluY |
| ADediting_735315 | chr19_2830120_+ | SINE | Alu | Name=AluY |
| ADediting_735316 | chr19_2830134_+ | SINE | Alu | Name=AluY |
| ADediting_735317 | chr19_2830142_+ | SINE | Alu | Name=AluY |
| ADediting_735318 | chr19_2830195_+ | SINE | Alu | Name=AluY |
| ADediting_735319 | chr19_2830209_+ | SINE | Alu | Name=AluY |
| ADediting_735320 | chr19_2830619_+ | SINE | Alu | Name=AluSz6 |
| ADediting_735321 | chr19_2830627_+ | SINE | Alu | Name=AluSz6 |
| ADediting_735322 | chr19_2830713_+ | SINE | Alu | Name=AluSz6 |
| ADediting_735323 | chr19_2830946_+ | SINE | Alu | Name=AluSq |
| ADediting_735324 | chr19_2830947_+ | SINE | Alu | Name=AluSq |
| ADediting_735325 | chr19_2830949_+ | SINE | Alu | Name=AluSq |
| ADediting_735326 | chr19_2831027_+ | SINE | Alu | Name=AluSq |
| ADediting_735327 | chr19_2831346_+ | SINE | Alu | Name=AluY |
| ADediting_735328 | chr19_2835054_+ | SINE | Alu | Name=AluJr |
| ADediting_735329 | chr19_2835068_+ | SINE | Alu | Name=AluJr |
| ADediting_735330 | chr19_2835073_+ | SINE | Alu | Name=AluJr |
| ADediting_735331 | chr19_2835078_+ | SINE | Alu | Name=AluJr |
| ADediting_735332 | chr19_2835085_+ | SINE | Alu | Name=AluJr |
| ADediting_735333 | chr19_2835098_+ | SINE | Alu | Name=AluJr |
| ADediting_735334 | chr19_2835099_+ | SINE | Alu | Name=AluJr |
| ADediting_735335 | chr19_2835102_+ | SINE | Alu | Name=AluJr |
| ADediting_735336 | chr19_2835103_+ | SINE | Alu | Name=AluJr |
| ADediting_735337 | chr19_2835111_+ | SINE | Alu | Name=AluJr |
| ADediting_735338 | chr19_2835116_+ | SINE | Alu | Name=AluJr |
| ADediting_735339 | chr19_2835124_+ | SINE | Alu | Name=AluJr |
| ADediting_735340 | chr19_2835128_+ | SINE | Alu | Name=AluJr |
| ADediting_735341 | chr19_2835132_+ | SINE | Alu | Name=AluJr |
| ADediting_735342 | chr19_2835135_+ | SINE | Alu | Name=AluJr |
| ADediting_735343 | chr19_2835138_+ | SINE | Alu | Name=AluJr |
| ADediting_735344 | chr19_2835140_+ | SINE | Alu | Name=AluJr |
| ADediting_735345 | chr19_2835194_+ | SINE | Alu | Name=AluY |
| ADediting_735346 | chr19_2835215_+ | SINE | Alu | Name=AluY |
| ADediting_735347 | chr19_2835217_+ | SINE | Alu | Name=AluY |
| ADediting_735348 | chr19_2835218_+ | SINE | Alu | Name=AluY |
| ADediting_735349 | chr19_2835223_+ | SINE | Alu | Name=AluY |
| ADediting_735350 | chr19_2835224_+ | SINE | Alu | Name=AluY |
| ADediting_735351 | chr19_2835231_+ | SINE | Alu | Name=AluY |
| ADediting_735352 | chr19_2835240_+ | SINE | Alu | Name=AluY |
| ADediting_735353 | chr19_2835253_+ | SINE | Alu | Name=AluY |
| ADediting_735354 | chr19_2835285_+ | SINE | Alu | Name=AluY |
| ADediting_735355 | chr19_2835289_+ | SINE | Alu | Name=AluY |
| ADediting_735356 | chr19_2835295_+ | SINE | Alu | Name=AluY |
| ADediting_735357 | chr19_2835315_+ | SINE | Alu | Name=AluY |
| ADediting_735358 | chr19_2835322_+ | SINE | Alu | Name=AluY |
| ADediting_735359 | chr19_2835325_+ | SINE | Alu | Name=AluY |
| ADediting_735360 | chr19_2835351_+ | SINE | Alu | Name=AluY |
| ADediting_735361 | chr19_2835357_+ | SINE | Alu | Name=AluY |
| ADediting_735362 | chr19_2835358_+ | SINE | Alu | Name=AluY |
| ADediting_735363 | chr19_2835361_+ | SINE | Alu | Name=AluY |
| ADediting_735364 | chr19_2835365_+ | SINE | Alu | Name=AluY |
| ADediting_735365 | chr19_2835378_+ | SINE | Alu | Name=AluY |
| ADediting_735366 | chr19_2835393_+ | SINE | Alu | Name=AluY |
| ADediting_735367 | chr19_2835422_+ | SINE | Alu | Name=AluY |
| ADediting_735368 | chr19_2835509_+ | SINE | Alu | Name=AluJr |
| ADediting_735369 | chr19_2835518_+ | SINE | Alu | Name=AluJr |
| ADediting_735370 | chr19_2835568_+ | SINE | Alu | Name=AluJr |
| ADediting_735371 | chr19_2835569_+ | SINE | Alu | Name=AluJr |
| ADediting_735372 | chr19_2835570_+ | SINE | Alu | Name=AluJr |
| ADediting_735373 | chr19_2835582_+ | SINE | Alu | Name=AluJr |
| ADediting_735374 | chr19_2835585_+ | SINE | Alu | Name=AluJr |
| ADediting_735375 | chr19_2835856_+ | SINE | Alu | Name=AluJo |
| ADediting_735376 | chr19_2835875_+ | SINE | Alu | Name=AluJo |
| ADediting_735377 | chr19_2835880_+ | SINE | Alu | Name=AluJo |
| ADediting_735378 | chr19_2835894_+ | SINE | Alu | Name=AluJo |
| ADediting_735379 | chr19_2835928_+ | SINE | Alu | Name=AluJo |
| ADediting_735380 | chr19_2835929_+ | SINE | Alu | Name=AluJo |
| ADediting_735381 | chr19_2835932_+ | SINE | Alu | Name=AluJo |
| ADediting_735382 | chr19_2835933_+ | SINE | Alu | Name=AluJo |
| ADediting_735383 | chr19_2835941_+ | SINE | Alu | Name=AluJo |
| ADediting_735384 | chr19_2835946_+ | SINE | Alu | Name=AluJo |
| ADediting_735385 | chr19_2835968_+ | SINE | Alu | Name=AluJo |
| ADediting_735386 | chr19_2835989_+ | SINE | Alu | Name=AluJo |
| ADediting_735387 | chr19_2835993_+ | SINE | Alu | Name=AluJo |
| ADediting_735388 | chr19_2836034_+ | SINE | Alu | Name=AluJo |
| ADediting_735389 | chr19_2836037_+ | SINE | Alu | Name=AluJo |
| ADediting_735390 | chr19_2836046_+ | SINE | Alu | Name=AluJo |
| ADediting_735391 | chr19_2836057_+ | SINE | Alu | Name=AluJo |
| ADediting_735392 | chr19_2836058_+ | SINE | Alu | Name=AluJo |
| ADediting_735393 | chr19_2836059_+ | SINE | Alu | Name=AluJo |
| ADediting_735394 | chr19_2836066_+ | SINE | Alu | Name=AluJo |
| ADediting_735395 | chr19_2836071_+ | SINE | Alu | Name=AluJo |
| ADediting_735396 | chr19_2836072_+ | SINE | Alu | Name=AluJo |
| ADediting_735397 | chr19_2836075_+ | SINE | Alu | Name=AluJo |
| ADediting_735398 | chr19_2836076_+ | SINE | Alu | Name=AluJo |
| ADediting_735399 | chr19_2836084_+ | SINE | Alu | Name=AluJo |
| ADediting_735400 | chr19_2836097_+ | SINE | Alu | Name=AluJo |
| ADediting_735401 | chr19_2836098_+ | SINE | Alu | Name=AluJo |
| ADediting_735402 | chr19_2836099_+ | SINE | Alu | Name=AluJo |
| ADediting_735403 | chr19_2836111_+ | SINE | Alu | Name=AluJo |
| ADediting_1554561 | chr19_2822699_+ | SINE | Alu | Name=AluJo |
| ADediting_1554562 | chr19_2822731_+ | SINE | Alu | Name=AluJo |
| ADediting_1554563 | chr19_2835868_+ | SINE | Alu | Name=AluJo |
Top |
RNA A-to-I editing events in the alternative splicing sites for ZNF554 |
RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
Top |
Differntial gene expression between RNA A-to-I edited versus non-edited samples for ZNF554 |
Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event.* The grey color means N/A. |
Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.* Click on the image to enlarge it in a new window. |
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- Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples.* Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
Top |
Protein coding region RNA A-to-I editings for ZNF554 |
- Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
Top |
The effects of the RNA editing to the miRNA binding sites for ZNF554 |
RNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. |
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RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1554563 | chr19_2835868_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-4323 | chr19 | 2835865 | 2835871 | 7mer-m8 | 2835854 | 2835872 | 147 | -23.25 |
| ADediting_735330 | chr19_2835073_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-381-5p | chr19 | 2835067 | 2835073 | 7mer-m8 | 2835052 | 2835074 | 141 | -20.11 |
| ADediting_735334 | chr19_2835099_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-1199-5p | chr19 | 2835092 | 2835098 | 7mer-m8 | 2835080 | 2835099 | 156 | -28.57 |
| ADediting_735334 | chr19_2835099_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-6751-3p | chr19 | 2835092 | 2835098 | 7mer-m8 | 2835079 | 2835099 | 141 | -13.15 |
| ADediting_735336 | chr19_2835103_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-4759 | chr19 | 2835100 | 2835106 | 7mer-m8 | 2835087 | 2835107 | 144 | -12.42 |
| ADediting_735337 | chr19_2835111_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-3180-3p | chr19 | 2835108 | 2835115 | 8mer-1a | 2835091 | 2835115 | 144 | -27.71 |
| ADediting_735337 | chr19_2835111_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-3180 | chr19 | 2835108 | 2835115 | 8mer-1a | 2835096 | 2835115 | 141 | -20.49 |
| ADediting_735337 | chr19_2835111_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-3196 | chr19 | 2835108 | 2835115 | 8mer-1a | 2835098 | 2835115 | 153 | -23.4 |
| ADediting_735337 | chr19_2835111_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-6816-5p | chr19 | 2835108 | 2835115 | 8mer-1a | 2835096 | 2835115 | 149 | -27.77 |
| ADediting_735339 | chr19_2835124_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-1247-3p | chr19 | 2835119 | 2835125 | 7mer-m8 | 2835104 | 2835126 | 144 | -20.1 |
| ADediting_735340 | chr19_2835128_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-6765-3p | chr19 | 2835121 | 2835127 | 7mer-m8 | 2835108 | 2835128 | 149 | -21.67 |
| ADediting_735341 | chr19_2835132_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-5690 | chr19 | 2835125 | 2835131 | 7mer-m8 | 2835112 | 2835132 | 141 | -15.77 |
| ADediting_735341 | chr19_2835132_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-624-5p | chr19 | 2835130 | 2835137 | 8mer-1a | 2835115 | 2835137 | 163 | -21.87 |
| ADediting_735343 | chr19_2835138_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-101-3p | chr19 | 2835132 | 2835139 | 8mer-1a | 2835120 | 2835139 | 161 | -18.12 |
| ADediting_735343 | chr19_2835138_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-139-5p | chr19 | 2835134 | 2835140 | 7mer-m8 | 2835118 | 2835141 | 153 | -17.75 |
| ADediting_735345 | chr19_2835194_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-1281 | chr19 | 2835187 | 2835193 | 7mer-m8 | 2835178 | 2835194 | 158 | -23.49 |
| ADediting_735346 | chr19_2835215_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-10399-5p | chr19 | 2835212 | 2835218 | 7mer-m8 | 2835198 | 2835219 | 144 | -11.88 |
| ADediting_735346 | chr19_2835215_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-6504-3p | chr19 | 2835212 | 2835218 | 7mer-m8 | 2835198 | 2835219 | 156 | -15.93 |
| ADediting_735346 | chr19_2835215_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-7151-3p | chr19 | 2835210 | 2835217 | 8mer-1a | 2835201 | 2835217 | 146 | -17.62 |
| ADediting_735348 | chr19_2835218_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-3117-3p | chr19 | 2835216 | 2835223 | 8mer-1a | 2835201 | 2835223 | 147 | -15.73 |
| ADediting_735348 | chr19_2835218_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-4759 | chr19 | 2835215 | 2835222 | 8mer-1a | 2835202 | 2835222 | 149 | -14.74 |
| ADediting_735348 | chr19_2835218_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-625-3p | chr19 | 2835212 | 2835218 | 7mer-m8 | 2835198 | 2835219 | 140 | -14.38 |
| ADediting_735350 | chr19_2835224_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-302a-3p | chr19 | 2835222 | 2835228 | 7mer-m8 | 2835208 | 2835229 | 147 | -11.4 |
| ADediting_735350 | chr19_2835224_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-302b-3p | chr19 | 2835222 | 2835228 | 7mer-m8 | 2835209 | 2835229 | 145 | -10.16 |
| ADediting_735350 | chr19_2835224_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-302c-3p | chr19 | 2835222 | 2835228 | 7mer-m8 | 2835207 | 2835229 | 141 | -12.09 |
| ADediting_735350 | chr19_2835224_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-302d-3p | chr19 | 2835222 | 2835228 | 7mer-m8 | 2835208 | 2835229 | 143 | -10.23 |
| ADediting_735350 | chr19_2835224_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-302e | chr19 | 2835222 | 2835228 | 7mer-m8 | 2835213 | 2835229 | 141 | -8.75 |
| ADediting_735350 | chr19_2835224_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-372-3p | chr19 | 2835222 | 2835228 | 7mer-m8 | 2835208 | 2835229 | 151 | -15.56 |
| ADediting_735350 | chr19_2835224_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-373-3p | chr19 | 2835222 | 2835228 | 7mer-m8 | 2835207 | 2835229 | 167 | -20.39 |
| ADediting_735350 | chr19_2835224_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-520a-3p | chr19 | 2835222 | 2835228 | 7mer-m8 | 2835207 | 2835229 | 142 | -11.87 |
| ADediting_735350 | chr19_2835224_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-520b-3p | chr19 | 2835222 | 2835228 | 7mer-m8 | 2835208 | 2835229 | 144 | -15.17 |
| ADediting_735350 | chr19_2835224_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-520c-3p | chr19 | 2835222 | 2835228 | 7mer-m8 | 2835209 | 2835229 | 146 | -15.17 |
| ADediting_735350 | chr19_2835224_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-520d-3p | chr19 | 2835222 | 2835228 | 7mer-m8 | 2835208 | 2835229 | 140 | -15.64 |
| ADediting_735350 | chr19_2835224_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-520e-3p | chr19 | 2835222 | 2835228 | 7mer-m8 | 2835209 | 2835229 | 143 | -14.43 |
| ADediting_735351 | chr19_2835231_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-150-5p | chr19 | 2835228 | 2835234 | 7mer-m8 | 2835214 | 2835235 | 140 | -15.81 |
| ADediting_735351 | chr19_2835231_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-186-3p | chr19 | 2835226 | 2835233 | 8mer-1a | 2835211 | 2835233 | 147 | -16.73 |
| ADediting_735351 | chr19_2835231_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-520g-3p | chr19 | 2835224 | 2835230 | 7mer-m8 | 2835209 | 2835231 | 151 | -9.43 |
| ADediting_735351 | chr19_2835231_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-520h | chr19 | 2835224 | 2835230 | 7mer-m8 | 2835209 | 2835231 | 146 | -9.43 |
| ADediting_735352 | chr19_2835240_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-10396a-3p | chr19 | 2835236 | 2835242 | 7mer-m8 | 2835222 | 2835243 | 151 | -23 |
| ADediting_735352 | chr19_2835240_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-10396b-3p | chr19 | 2835236 | 2835242 | 7mer-m8 | 2835221 | 2835243 | 151 | -23 |
| ADediting_735352 | chr19_2835240_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-4707-5p | chr19 | 2835235 | 2835241 | 7mer-m8 | 2835218 | 2835242 | 142 | -28.28 |
| ADediting_735354 | chr19_2835285_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-5008-3p | chr19 | 2835283 | 2835289 | 7mer-m8 | 2835269 | 2835290 | 154 | -22.09 |
| ADediting_735354 | chr19_2835285_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-6737-3p | chr19 | 2835283 | 2835289 | 7mer-m8 | 2835269 | 2835290 | 140 | -14.74 |
| ADediting_735354 | chr19_2835285_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-7157-3p | chr19 | 2835283 | 2835289 | 7mer-m8 | 2835267 | 2835290 | 159 | -22.04 |
| ADediting_735356 | chr19_2835295_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-3158-3p | chr19 | 2835292 | 2835298 | 7mer-m8 | 2835274 | 2835299 | 153 | -22.04 |
| ADediting_735356 | chr19_2835295_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-6837-3p | chr19 | 2835288 | 2835294 | 7mer-m8 | 2835273 | 2835295 | 155 | -18.62 |
| ADediting_735357 | chr19_2835315_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-153-5p | chr19 | 2835308 | 2835314 | 7mer-m8 | 2835295 | 2835315 | 146 | -9.95 |
| ADediting_735357 | chr19_2835315_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-3680-3p | chr19 | 2835312 | 2835319 | 8mer-1a | 2835297 | 2835319 | 140 | -13.99 |
| ADediting_735360 | chr19_2835351_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-140-3p | chr19 | 2835346 | 2835352 | 7mer-m8 | 2835333 | 2835353 | 155 | -25.24 |
| ADediting_735366 | chr19_2835393_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-342-3p | chr19 | 2835386 | 2835392 | 7mer-m8 | 2835371 | 2835393 | 140 | -15.26 |
| ADediting_735366 | chr19_2835393_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-4284 | chr19 | 2835388 | 2835394 | 7mer-m8 | 2835378 | 2835395 | 156 | -24.29 |
| ADediting_735366 | chr19_2835393_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-4437 | chr19 | 2835389 | 2835395 | 7mer-m8 | 2835376 | 2835396 | 141 | -17.27 |
| ADediting_735369 | chr19_2835518_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-1910-5p | chr19 | 2835516 | 2835522 | 7mer-m8 | 2835503 | 2835523 | 148 | -21.96 |
| ADediting_735369 | chr19_2835518_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-221-5p | chr19 | 2835512 | 2835519 | 8mer-1a | 2835502 | 2835519 | 149 | -20.07 |
| ADediting_735369 | chr19_2835518_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-3128 | chr19 | 2835511 | 2835517 | 7mer-m8 | 2835494 | 2835518 | 158 | -20.98 |
| ADediting_735369 | chr19_2835518_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-6838-3p | chr19 | 2835515 | 2835521 | 7mer-m8 | 2835503 | 2835522 | 154 | -17.31 |
| ADediting_735369 | chr19_2835518_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-8073 | chr19 | 2835512 | 2835519 | 8mer-1a | 2835496 | 2835519 | 147 | -21.65 |
| ADediting_735370 | chr19_2835568_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-6771-5p | chr19 | 2835562 | 2835569 | 8mer-1a | 2835550 | 2835569 | 157 | -28.93 |
| ADediting_735371 | chr19_2835569_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-326 | chr19 | 2835564 | 2835570 | 7mer-m8 | 2835552 | 2835571 | 140 | -15.38 |
| ADediting_735371 | chr19_2835569_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-330-5p | chr19 | 2835564 | 2835570 | 7mer-m8 | 2835550 | 2835571 | 140 | -21.83 |
| ADediting_735371 | chr19_2835569_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-4314 | chr19 | 2835563 | 2835569 | 7mer-m8 | 2835552 | 2835570 | 143 | -25.89 |
| ADediting_735371 | chr19_2835569_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-514a-5p | chr19 | 2835565 | 2835571 | 7mer-m8 | 2835552 | 2835572 | 154 | -20.64 |
| ADediting_735372 | chr19_2835570_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-3189-3p | chr19 | 2835564 | 2835570 | 7mer-m8 | 2835551 | 2835571 | 140 | -20.5 |
| ADediting_735372 | chr19_2835570_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-6813-3p | chr19 | 2835565 | 2835571 | 7mer-m8 | 2835552 | 2835572 | 140 | -12.93 |
| ADediting_735373 | chr19_2835582_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-2115-5p | chr19 | 2835580 | 2835587 | 8mer-1a | 2835569 | 2835587 | 147 | -15.19 |
| ADediting_735376 | chr19_2835875_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-500a-3p | chr19 | 2835873 | 2835879 | 7mer-m8 | 2835859 | 2835880 | 148 | -18.65 |
| ADediting_735378 | chr19_2835894_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-505-5p | chr19 | 2835892 | 2835898 | 7mer-m8 | 2835878 | 2835899 | 147 | -19.83 |
| ADediting_735382 | chr19_2835933_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-1288-3p | chr19 | 2835929 | 2835935 | 7mer-m8 | 2835916 | 2835936 | 151 | -22.88 |
| ADediting_735382 | chr19_2835933_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-3169 | chr19 | 2835930 | 2835936 | 7mer-m8 | 2835918 | 2835937 | 148 | -17.92 |
| ADediting_735383 | chr19_2835941_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-6765-5p | chr19 | 2835939 | 2835945 | 7mer-m8 | 2835925 | 2835946 | 155 | -28.33 |
| ADediting_735385 | chr19_2835968_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-143-5p | chr19 | 2835964 | 2835971 | 8mer-1a | 2835950 | 2835971 | 148 | -22.32 |
| ADediting_735386 | chr19_2835989_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-1268a | chr19 | 2835985 | 2835992 | 8mer-1a | 2835975 | 2835992 | 167 | -31.63 |
| ADediting_735386 | chr19_2835989_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-1268b | chr19 | 2835985 | 2835992 | 8mer-1a | 2835973 | 2835992 | 169 | -31.63 |
| ADediting_735386 | chr19_2835989_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-4486 | chr19 | 2835987 | 2835993 | 7mer-m8 | 2835979 | 2835994 | 149 | -25.09 |
| ADediting_735389 | chr19_2836037_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-4783-3p | chr19 | 2836032 | 2836038 | 7mer-m8 | 2836019 | 2836039 | 153 | -26.16 |
| ADediting_735390 | chr19_2836046_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-3940-3p | chr19 | 2836043 | 2836049 | 7mer-m8 | 2836032 | 2836050 | 141 | -25.25 |
| ADediting_735392 | chr19_2836058_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-4294 | chr19 | 2836056 | 2836062 | 7mer-m8 | 2836046 | 2836063 | 150 | -18.29 |
| ADediting_735392 | chr19_2836058_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-4329 | chr19 | 2836051 | 2836058 | 8mer-1a | 2836040 | 2836058 | 145 | -14.9 |
| ADediting_735393 | chr19_2836059_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-28-5p | chr19 | 2836057 | 2836063 | 7mer-m8 | 2836044 | 2836064 | 143 | -18.76 |
| ADediting_735393 | chr19_2836059_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-3139 | chr19 | 2836057 | 2836063 | 7mer-m8 | 2836042 | 2836064 | 157 | -23.25 |
| ADediting_735393 | chr19_2836059_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-708-5p | chr19 | 2836057 | 2836063 | 7mer-m8 | 2836043 | 2836064 | 154 | -22.59 |
| ADediting_735394 | chr19_2836066_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-6840-3p | chr19 | 2836060 | 2836066 | 7mer-m8 | 2836046 | 2836067 | 159 | -23.47 |
| ADediting_735398 | chr19_2836076_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-1269a | chr19 | 2836073 | 2836079 | 7mer-m8 | 2836059 | 2836080 | 140 | -17.87 |
| ADediting_735398 | chr19_2836076_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-1269b | chr19 | 2836073 | 2836079 | 7mer-m8 | 2836059 | 2836080 | 140 | -17.84 |
| ADediting_735398 | chr19_2836076_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-1288-3p | chr19 | 2836072 | 2836079 | 8mer-1a | 2836058 | 2836079 | 152 | -25.48 |
| ADediting_735400 | chr19_2836097_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-6771-5p | chr19 | 2836091 | 2836098 | 8mer-1a | 2836077 | 2836098 | 159 | -26.64 |
| ADediting_735401 | chr19_2836098_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-3192-5p | chr19 | 2836091 | 2836098 | 8mer-1a | 2836079 | 2836098 | 156 | -25.88 |
| ADediting_735401 | chr19_2836098_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-326 | chr19 | 2836093 | 2836099 | 7mer-m8 | 2836081 | 2836100 | 140 | -14.14 |
| ADediting_735401 | chr19_2836098_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-330-5p | chr19 | 2836093 | 2836099 | 7mer-m8 | 2836079 | 2836100 | 140 | -21.34 |
| ADediting_735401 | chr19_2836098_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-4314 | chr19 | 2836092 | 2836098 | 7mer-m8 | 2836082 | 2836099 | 140 | -18.8 |
| ADediting_735401 | chr19_2836098_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-514a-5p | chr19 | 2836094 | 2836100 | 7mer-m8 | 2836081 | 2836101 | 154 | -19.44 |
| ADediting_735402 | chr19_2836099_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-3189-3p | chr19 | 2836093 | 2836099 | 7mer-m8 | 2836077 | 2836100 | 149 | -20.43 |
| ADediting_735402 | chr19_2836099_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-6813-3p | chr19 | 2836094 | 2836100 | 7mer-m8 | 2836081 | 2836101 | 140 | -16.1 |
RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_735328 | chr19_2835054_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-3654 | chr19 | 2835049 | 2835055 | 7mer-m8 | 2835036 | 2835056 | 144 | -19.7 |
| ADediting_735328 | chr19_2835054_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-378a-3p | chr19 | 2835048 | 2835054 | 7mer-m8 | 2835035 | 2835055 | 147 | -19.41 |
| ADediting_735328 | chr19_2835054_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-378b | chr19 | 2835048 | 2835054 | 7mer-m8 | 2835038 | 2835055 | 143 | -16.8 |
| ADediting_735328 | chr19_2835054_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-378c | chr19 | 2835048 | 2835054 | 7mer-m8 | 2835032 | 2835055 | 147 | -23.95 |
| ADediting_735328 | chr19_2835054_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-378d | chr19 | 2835048 | 2835054 | 7mer-m8 | 2835037 | 2835055 | 147 | -18.15 |
| ADediting_735328 | chr19_2835054_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-378e | chr19 | 2835048 | 2835054 | 7mer-m8 | 2835038 | 2835055 | 147 | -20.21 |
| ADediting_735328 | chr19_2835054_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-378f | chr19 | 2835048 | 2835054 | 7mer-m8 | 2835037 | 2835055 | 151 | -20.44 |
| ADediting_735328 | chr19_2835054_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-378h | chr19 | 2835048 | 2835054 | 7mer-m8 | 2835028 | 2835055 | 146 | -25.08 |
| ADediting_735328 | chr19_2835054_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-378i | chr19 | 2835048 | 2835054 | 7mer-m8 | 2835036 | 2835055 | 143 | -19.5 |
| ADediting_735328 | chr19_2835054_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-422a | chr19 | 2835048 | 2835054 | 7mer-m8 | 2835034 | 2835055 | 144 | -20.28 |
| ADediting_735328 | chr19_2835054_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-4252 | chr19 | 2835052 | 2835058 | 7mer-m8 | 2835039 | 2835059 | 149 | -20.65 |
| ADediting_735329 | chr19_2835068_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-202-3p | chr19 | 2835065 | 2835072 | 8mer-1a | 2835054 | 2835072 | 150 | -16.5 |
| ADediting_735330 | chr19_2835073_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-1294 | chr19 | 2835067 | 2835073 | 7mer-m8 | 2835051 | 2835074 | 144 | -17.67 |
| ADediting_735331 | chr19_2835078_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-17-3p | chr19 | 2835072 | 2835078 | 7mer-m8 | 2835059 | 2835079 | 153 | -19.57 |
| ADediting_735335 | chr19_2835102_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-3159 | chr19 | 2835100 | 2835106 | 7mer-m8 | 2835086 | 2835107 | 152 | -15.39 |
| ADediting_735336 | chr19_2835103_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-3159 | chr19 | 2835100 | 2835106 | 7mer-m8 | 2835086 | 2835107 | 152 | -15.39 |
| ADediting_735337 | chr19_2835111_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-1233-5p | chr19 | 2835105 | 2835111 | 7mer-m8 | 2835087 | 2835112 | 147 | -25.15 |
| ADediting_735337 | chr19_2835111_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-1273h-5p | chr19 | 2835104 | 2835110 | 7mer-m8 | 2835091 | 2835111 | 140 | -16.61 |
| ADediting_735337 | chr19_2835111_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-30b-3p | chr19 | 2835104 | 2835110 | 7mer-m8 | 2835092 | 2835111 | 142 | -15.84 |
| ADediting_735337 | chr19_2835111_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-30b-3p | chr19 | 2835104 | 2835110 | 7mer-m8 | 2835103 | 2835124 | 147 | -22.08 |
| ADediting_735337 | chr19_2835111_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-3689a-3p | chr19 | 2835104 | 2835110 | 7mer-m8 | 2835090 | 2835111 | 142 | -16.26 |
| ADediting_735337 | chr19_2835111_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-3689b-3p | chr19 | 2835104 | 2835110 | 7mer-m8 | 2835092 | 2835111 | 148 | -15.98 |
| ADediting_735337 | chr19_2835111_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-3689c | chr19 | 2835104 | 2835110 | 7mer-m8 | 2835092 | 2835111 | 148 | -15.98 |
| ADediting_735337 | chr19_2835111_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-4651 | chr19 | 2835108 | 2835115 | 8mer-1a | 2835097 | 2835115 | 149 | -21.6 |
| ADediting_735337 | chr19_2835111_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-608 | chr19 | 2835108 | 2835115 | 8mer-1a | 2835094 | 2835115 | 144 | -19.74 |
| ADediting_735337 | chr19_2835111_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-6737-5p | chr19 | 2835109 | 2835115 | 7mer-m8 | 2835096 | 2835116 | 149 | -21.65 |
| ADediting_735337 | chr19_2835111_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-6756-5p | chr19 | 2835107 | 2835113 | 7mer-m8 | 2835094 | 2835114 | 143 | -23 |
| ADediting_735337 | chr19_2835111_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-6778-5p | chr19 | 2835105 | 2835111 | 7mer-m8 | 2835091 | 2835112 | 150 | -23.18 |
| ADediting_735337 | chr19_2835111_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-6779-5p | chr19 | 2835104 | 2835110 | 7mer-m8 | 2835088 | 2835111 | 145 | -23.48 |
| ADediting_735337 | chr19_2835111_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-6780a-5p | chr19 | 2835104 | 2835110 | 7mer-m8 | 2835089 | 2835111 | 141 | -18.81 |
| ADediting_735337 | chr19_2835111_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-6780a-5p | chr19 | 2835104 | 2835110 | 7mer-m8 | 2835102 | 2835124 | 140 | -21.24 |
| ADediting_735337 | chr19_2835111_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-6812-5p | chr19 | 2835109 | 2835115 | 7mer-m8 | 2835090 | 2835116 | 153 | -26.39 |
| ADediting_735337 | chr19_2835111_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-6819-5p | chr19 | 2835109 | 2835115 | 7mer-m8 | 2835095 | 2835116 | 153 | -25.07 |
| ADediting_735338 | chr19_2835116_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-4731-5p | chr19 | 2835111 | 2835117 | 7mer-m8 | 2835097 | 2835118 | 140 | -17.78 |
| ADediting_735338 | chr19_2835116_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-485-5p | chr19 | 2835114 | 2835120 | 7mer-m8 | 2835099 | 2835121 | 151 | -18.46 |
| ADediting_735338 | chr19_2835116_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-6737-5p | chr19 | 2835109 | 2835115 | 7mer-m8 | 2835096 | 2835116 | 149 | -21.65 |
| ADediting_735338 | chr19_2835116_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-6812-5p | chr19 | 2835109 | 2835115 | 7mer-m8 | 2835090 | 2835116 | 153 | -26.39 |
| ADediting_735338 | chr19_2835116_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-6819-5p | chr19 | 2835109 | 2835115 | 7mer-m8 | 2835095 | 2835116 | 153 | -25.07 |
| ADediting_735338 | chr19_2835116_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-6884-5p | chr19 | 2835114 | 2835120 | 7mer-m8 | 2835101 | 2835121 | 149 | -17.84 |
| ADediting_735338 | chr19_2835116_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-7155-5p | chr19 | 2835110 | 2835116 | 7mer-m8 | 2835099 | 2835117 | 142 | -18.29 |
| ADediting_735339 | chr19_2835124_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-1273h-5p | chr19 | 2835117 | 2835123 | 7mer-m8 | 2835105 | 2835124 | 147 | -21.39 |
| ADediting_735339 | chr19_2835124_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-30b-3p | chr19 | 2835117 | 2835123 | 7mer-m8 | 2835103 | 2835124 | 147 | -22.08 |
| ADediting_735339 | chr19_2835124_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-3689a-3p | chr19 | 2835117 | 2835123 | 7mer-m8 | 2835102 | 2835124 | 145 | -23.87 |
| ADediting_735339 | chr19_2835124_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-3689b-3p | chr19 | 2835117 | 2835123 | 7mer-m8 | 2835102 | 2835124 | 145 | -23.92 |
| ADediting_735339 | chr19_2835124_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-3689c | chr19 | 2835117 | 2835123 | 7mer-m8 | 2835102 | 2835124 | 145 | -23.92 |
| ADediting_735339 | chr19_2835124_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-6780a-5p | chr19 | 2835117 | 2835123 | 7mer-m8 | 2835102 | 2835124 | 140 | -21.24 |
| ADediting_735345 | chr19_2835194_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-6836-3p | chr19 | 2835187 | 2835193 | 7mer-m8 | 2835174 | 2835194 | 147 | -17.9 |
| ADediting_735349 | chr19_2835223_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-651-5p | chr19 | 2835217 | 2835223 | 7mer-m8 | 2835200 | 2835224 | 147 | -9.73 |
| ADediting_735350 | chr19_2835224_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-651-5p | chr19 | 2835217 | 2835223 | 7mer-m8 | 2835200 | 2835224 | 147 | -9.73 |
| ADediting_735353 | chr19_2835253_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-640 | chr19 | 2835246 | 2835252 | 7mer-m8 | 2835231 | 2835253 | 150 | -25.8 |
| ADediting_735354 | chr19_2835285_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-3152-3p | chr19 | 2835281 | 2835288 | 8mer-1a | 2835268 | 2835288 | 145 | -18.14 |
| ADediting_735355 | chr19_2835289_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-892a | chr19 | 2835284 | 2835290 | 7mer-m8 | 2835271 | 2835291 | 140 | -15.2 |
| ADediting_735356 | chr19_2835295_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-6823-5p | chr19 | 2835293 | 2835299 | 7mer-m8 | 2835280 | 2835300 | 143 | -16.66 |
| ADediting_735360 | chr19_2835351_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-7151-3p | chr19 | 2835344 | 2835350 | 7mer-m8 | 2835331 | 2835351 | 140 | -17.98 |
| ADediting_735361 | chr19_2835357_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-3913-5p | chr19 | 2835351 | 2835357 | 7mer-m8 | 2835337 | 2835358 | 146 | -18.5 |
| ADediting_735361 | chr19_2835357_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-4425 | chr19 | 2835352 | 2835358 | 7mer-m8 | 2835340 | 2835359 | 154 | -24.66 |
| ADediting_735361 | chr19_2835357_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-4703-3p | chr19 | 2835355 | 2835361 | 7mer-m8 | 2835339 | 2835362 | 150 | -17.55 |
| ADediting_735362 | chr19_2835358_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-1244 | chr19 | 2835356 | 2835362 | 7mer-m8 | 2835337 | 2835363 | 155 | -16.35 |
| ADediting_735362 | chr19_2835358_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-3913-5p | chr19 | 2835351 | 2835357 | 7mer-m8 | 2835337 | 2835358 | 146 | -18.5 |
| ADediting_735362 | chr19_2835358_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-4425 | chr19 | 2835352 | 2835358 | 7mer-m8 | 2835340 | 2835359 | 154 | -24.66 |
| ADediting_735362 | chr19_2835358_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-4703-3p | chr19 | 2835355 | 2835361 | 7mer-m8 | 2835339 | 2835362 | 150 | -17.55 |
| ADediting_735363 | chr19_2835361_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-1244 | chr19 | 2835356 | 2835362 | 7mer-m8 | 2835337 | 2835363 | 155 | -16.35 |
| ADediting_735363 | chr19_2835361_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-4703-3p | chr19 | 2835355 | 2835361 | 7mer-m8 | 2835339 | 2835362 | 150 | -17.55 |
| ADediting_735364 | chr19_2835365_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-1200 | chr19 | 2835361 | 2835367 | 7mer-m8 | 2835347 | 2835368 | 145 | -16.66 |
| ADediting_735365 | chr19_2835378_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-1976 | chr19 | 2835375 | 2835382 | 8mer-1a | 2835362 | 2835382 | 153 | -25.04 |
| ADediting_735365 | chr19_2835378_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-6747-3p | chr19 | 2835373 | 2835380 | 8mer-1a | 2835358 | 2835380 | 149 | -23.42 |
| ADediting_735367 | chr19_2835422_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-4638-5p | chr19 | 2835416 | 2835423 | 8mer-1a | 2835404 | 2835423 | 146 | -21.99 |
| ADediting_735370 | chr19_2835568_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-30b-3p | chr19 | 2835561 | 2835568 | 8mer-1a | 2835547 | 2835568 | 144 | -15.04 |
| ADediting_735370 | chr19_2835568_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-3689a-3p | chr19 | 2835561 | 2835568 | 8mer-1a | 2835546 | 2835568 | 146 | -18.82 |
| ADediting_735370 | chr19_2835568_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-3689b-3p | chr19 | 2835561 | 2835568 | 8mer-1a | 2835546 | 2835568 | 146 | -18.82 |
| ADediting_735370 | chr19_2835568_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-3689c | chr19 | 2835561 | 2835568 | 8mer-1a | 2835546 | 2835568 | 146 | -18.82 |
| ADediting_735370 | chr19_2835568_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-6779-5p | chr19 | 2835561 | 2835568 | 8mer-1a | 2835548 | 2835568 | 140 | -19.23 |
| ADediting_735370 | chr19_2835568_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-887-5p | chr19 | 2835562 | 2835569 | 8mer-1a | 2835548 | 2835569 | 148 | -18.19 |
| ADediting_735371 | chr19_2835569_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-887-5p | chr19 | 2835562 | 2835569 | 8mer-1a | 2835548 | 2835569 | 148 | -18.19 |
| ADediting_735377 | chr19_2835880_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-324-3p | chr19 | 2835877 | 2835883 | 7mer-m8 | 2835860 | 2835884 | 151 | -17.37 |
| ADediting_735377 | chr19_2835880_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-4252 | chr19 | 2835878 | 2835884 | 7mer-m8 | 2835865 | 2835885 | 150 | -22.63 |
| ADediting_735377 | chr19_2835880_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-4793-3p | chr19 | 2835874 | 2835880 | 7mer-m8 | 2835858 | 2835881 | 147 | -16.93 |
| ADediting_735378 | chr19_2835894_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-4633-3p | chr19 | 2835892 | 2835898 | 7mer-m8 | 2835876 | 2835899 | 143 | -20.8 |
| ADediting_735379 | chr19_2835928_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-8081 | chr19 | 2835922 | 2835928 | 7mer-m8 | 2835907 | 2835929 | 140 | -13.6 |
| ADediting_735380 | chr19_2835929_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-8081 | chr19 | 2835922 | 2835928 | 7mer-m8 | 2835907 | 2835929 | 140 | -13.6 |
| ADediting_735383 | chr19_2835941_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-1233-5p | chr19 | 2835935 | 2835941 | 7mer-m8 | 2835921 | 2835942 | 145 | -18.1 |
| ADediting_735383 | chr19_2835941_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-1273h-5p | chr19 | 2835934 | 2835940 | 7mer-m8 | 2835923 | 2835941 | 141 | -18.44 |
| ADediting_735383 | chr19_2835941_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-30b-3p | chr19 | 2835934 | 2835940 | 7mer-m8 | 2835922 | 2835941 | 146 | -15.96 |
| ADediting_735383 | chr19_2835941_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-3689a-3p | chr19 | 2835934 | 2835940 | 7mer-m8 | 2835920 | 2835941 | 147 | -15.52 |
| ADediting_735383 | chr19_2835941_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-3689b-3p | chr19 | 2835934 | 2835940 | 7mer-m8 | 2835920 | 2835941 | 147 | -18.27 |
| ADediting_735383 | chr19_2835941_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-3689c | chr19 | 2835934 | 2835940 | 7mer-m8 | 2835920 | 2835941 | 147 | -18.27 |
| ADediting_735383 | chr19_2835941_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-6778-5p | chr19 | 2835935 | 2835941 | 7mer-m8 | 2835921 | 2835942 | 150 | -21.83 |
| ADediting_735383 | chr19_2835941_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-6779-5p | chr19 | 2835934 | 2835940 | 7mer-m8 | 2835918 | 2835941 | 153 | -25.29 |
| ADediting_735383 | chr19_2835941_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-6780a-5p | chr19 | 2835934 | 2835940 | 7mer-m8 | 2835919 | 2835941 | 141 | -20.6 |
| ADediting_735384 | chr19_2835946_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-4478 | chr19 | 2835943 | 2835949 | 7mer-m8 | 2835934 | 2835950 | 155 | -27.09 |
| ADediting_735384 | chr19_2835946_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-485-5p | chr19 | 2835944 | 2835950 | 7mer-m8 | 2835929 | 2835951 | 151 | -18.29 |
| ADediting_735384 | chr19_2835946_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-7160-5p | chr19 | 2835941 | 2835947 | 7mer-m8 | 2835928 | 2835948 | 151 | -20.81 |
| ADediting_735384 | chr19_2835946_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-7162-3p | chr19 | 2835940 | 2835946 | 7mer-m8 | 2835929 | 2835947 | 152 | -18.02 |
| ADediting_735385 | chr19_2835968_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-511-3p | chr19 | 2835966 | 2835972 | 7mer-m8 | 2835954 | 2835973 | 145 | -13.12 |
| ADediting_735386 | chr19_2835989_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-4455 | chr19 | 2835985 | 2835992 | 8mer-1a | 2835977 | 2835992 | 142 | -14.76 |
| ADediting_735387 | chr19_2835993_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-5589-5p | chr19 | 2835988 | 2835994 | 7mer-m8 | 2835975 | 2835995 | 149 | -19.62 |
| ADediting_735388 | chr19_2836034_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-4299 | chr19 | 2836031 | 2836037 | 7mer-m8 | 2836021 | 2836038 | 142 | -12.91 |
| ADediting_735389 | chr19_2836037_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-4299 | chr19 | 2836031 | 2836037 | 7mer-m8 | 2836021 | 2836038 | 142 | -12.91 |
| ADediting_735390 | chr19_2836046_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-5189-5p | chr19 | 2836040 | 2836046 | 7mer-m8 | 2836022 | 2836047 | 153 | -21.47 |
| ADediting_735390 | chr19_2836046_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-612 | chr19 | 2836040 | 2836046 | 7mer-m8 | 2836024 | 2836047 | 153 | -22.58 |
| ADediting_735390 | chr19_2836046_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-661 | chr19 | 2836042 | 2836048 | 7mer-m8 | 2836025 | 2836049 | 150 | -24.65 |
| ADediting_735390 | chr19_2836046_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-6860 | chr19 | 2836040 | 2836046 | 7mer-m8 | 2836029 | 2836047 | 155 | -24.46 |
| ADediting_735390 | chr19_2836046_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-939-3p | chr19 | 2836041 | 2836047 | 7mer-m8 | 2836027 | 2836048 | 146 | -18.66 |
| ADediting_735394 | chr19_2836066_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-3670 | chr19 | 2836063 | 2836070 | 8mer-1a | 2836047 | 2836070 | 140 | -11.96 |
| ADediting_735394 | chr19_2836066_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-3934-3p | chr19 | 2836061 | 2836067 | 7mer-m8 | 2836041 | 2836068 | 148 | -27.75 |
| ADediting_735398 | chr19_2836076_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-8056 | chr19 | 2836074 | 2836080 | 7mer-m8 | 2836062 | 2836081 | 154 | -15.82 |
| ADediting_735399 | chr19_2836084_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-6748-5p | chr19 | 2836078 | 2836084 | 7mer-m8 | 2836066 | 2836085 | 149 | -19.91 |
| ADediting_735399 | chr19_2836084_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-6769a-5p | chr19 | 2836079 | 2836085 | 7mer-m8 | 2836063 | 2836086 | 144 | -23.62 |
| ADediting_735399 | chr19_2836084_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-6769b-5p | chr19 | 2836079 | 2836085 | 7mer-m8 | 2836064 | 2836086 | 151 | -26.13 |
| ADediting_735400 | chr19_2836097_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-30b-3p | chr19 | 2836090 | 2836097 | 8mer-1a | 2836076 | 2836097 | 151 | -15.84 |
| ADediting_735400 | chr19_2836097_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-3689a-3p | chr19 | 2836090 | 2836097 | 8mer-1a | 2836076 | 2836097 | 141 | -19.9 |
| ADediting_735400 | chr19_2836097_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-3689b-3p | chr19 | 2836090 | 2836097 | 8mer-1a | 2836076 | 2836097 | 141 | -19.95 |
| ADediting_735400 | chr19_2836097_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-3689c | chr19 | 2836090 | 2836097 | 8mer-1a | 2836076 | 2836097 | 141 | -19.95 |
| ADediting_735400 | chr19_2836097_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-6779-5p | chr19 | 2836090 | 2836097 | 8mer-1a | 2836074 | 2836097 | 151 | -24.22 |
| ADediting_735400 | chr19_2836097_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-887-5p | chr19 | 2836091 | 2836098 | 8mer-1a | 2836078 | 2836098 | 147 | -14 |
| ADediting_735401 | chr19_2836098_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-887-5p | chr19 | 2836091 | 2836098 | 8mer-1a | 2836078 | 2836098 | 147 | -14 |
| ADediting_735403 | chr19_2836111_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-2054 | chr19 | 2836106 | 2836112 | 7mer-m8 | 2836089 | 2836113 | 146 | -11.94 |
RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1097295 | chr3_85385762_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-5688 | chr19 | 2836432 | 2836438 | 7mer-m8 | 2836418 | 2836439 | 143 | -10.69 |
| ADediting_286380 | chr11_79422188_- | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-5579-3p | chr19 | 2834870 | 2834876 | 7mer-m8 | 2834856 | 2834877 | 157 | -13.71 |
| ADediting_291761 | chr11_93733708_- | ENSG00000172006.12 | ENST00000591265.1 | ZNF554-204 | hsa-miR-1304-3p | chr19 | 2833972 | 2833978 | 7mer-m8 | 2833958 | 2833979 | 144 | -18.22 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-5585-3p | chr19 | 2836543 | 2836549 | 7mer-m8 | 2836528 | 2836550 | 159 | -12.96 |
RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1337757 | chr7_5495852_- | ENSG00000172006.12 | ENST00000317243.10 | ZNF554-201 | hsa-miR-589-3p | chr19 | 2835755 | 2835761 | 7mer-m8 | 2835739 | 2835762 | 142 | -12.26 |
Differentially expressed gene-miRNA network |
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The effects of the RNA editing to the stability of the RNA structures for ZNF554 |
- RNA A-to-I editing in mRNA.* Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| ENST00000317243.10 | protein_coding | ![]() | ![]() |
RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| ADediting_735328 | ENST00000317243.10 | chr19_2835054_+ | 2023 | -1412.30 | -1408.70 | -1526.70 |
| ADediting_735329 | ENST00000317243.10 | chr19_2835068_+ | 2037 | -1412.60 | -1408.70 | -1526.70 |
| ADediting_735330 | ENST00000317243.10 | chr19_2835073_+ | 2042 | -1408.30 | -1408.70 | -1526.70 |
| ADediting_735331 | ENST00000317243.10 | chr19_2835078_+ | 2047 | -1412.20 | -1408.70 | -1526.70 |
| ADediting_735332 | ENST00000317243.10 | chr19_2835085_+ | 2054 | -1411.70 | -1408.70 | -1526.70 |
| ADediting_735333 | ENST00000317243.10 | chr19_2835098_+ | 2067 | -1410.80 | -1408.70 | -1526.70 |
| ADediting_735334 | ENST00000317243.10 | chr19_2835099_+ | 2068 | -1411.10 | -1408.70 | -1526.70 |
| ADediting_735335 | ENST00000317243.10 | chr19_2835102_+ | 2071 | -1410.40 | -1408.70 | -1526.70 |
| ADediting_735336 | ENST00000317243.10 | chr19_2835103_+ | 2072 | -1410.40 | -1408.70 | -1526.70 |
| ADediting_735337 | ENST00000317243.10 | chr19_2835111_+ | 2080 | -1409.20 | -1408.70 | -1526.70 |
| ADediting_735338 | ENST00000317243.10 | chr19_2835116_+ | 2085 | -1411.10 | -1408.70 | -1526.70 |
| ADediting_735339 | ENST00000317243.10 | chr19_2835124_+ | 2093 | -1409.80 | -1408.70 | -1526.70 |
| ADediting_735340 | ENST00000317243.10 | chr19_2835128_+ | 2097 | -1410.80 | -1408.70 | -1526.70 |
| ADediting_735341 | ENST00000317243.10 | chr19_2835132_+ | 2101 | -1409.90 | -1408.70 | -1526.70 |
| ADediting_735342 | ENST00000317243.10 | chr19_2835135_+ | 2104 | -1412.50 | -1408.70 | -1526.70 |
| ADediting_735343 | ENST00000317243.10 | chr19_2835138_+ | 2107 | -1410.30 | -1408.70 | -1526.70 |
| ADediting_735344 | ENST00000317243.10 | chr19_2835140_+ | 2109 | -1413.40 | -1408.70 | -1526.70 |
| ADediting_735345 | ENST00000317243.10 | chr19_2835194_+ | 2163 | -1411.30 | -1408.70 | -1526.70 |
| ADediting_735346 | ENST00000317243.10 | chr19_2835215_+ | 2184 | -1414.90 | -1408.70 | -1526.70 |
| ADediting_735347 | ENST00000317243.10 | chr19_2835217_+ | 2186 | -1408.80 | -1408.70 | -1526.70 |
| ADediting_735348 | ENST00000317243.10 | chr19_2835218_+ | 2187 | -1408.70 | -1408.70 | -1526.70 |
| ADediting_735349 | ENST00000317243.10 | chr19_2835223_+ | 2192 | -1409.10 | -1408.70 | -1526.70 |
| ADediting_735350 | ENST00000317243.10 | chr19_2835224_+ | 2193 | -1415.40 | -1408.70 | -1526.70 |
| ADediting_735351 | ENST00000317243.10 | chr19_2835231_+ | 2200 | -1415.30 | -1408.70 | -1526.70 |
| ADediting_735352 | ENST00000317243.10 | chr19_2835240_+ | 2209 | -1407.90 | -1408.70 | -1526.70 |
| ADediting_735353 | ENST00000317243.10 | chr19_2835253_+ | 2222 | -1409.40 | -1408.70 | -1526.70 |
| ADediting_735354 | ENST00000317243.10 | chr19_2835285_+ | 2254 | -1408.70 | -1408.70 | -1526.70 |
| ADediting_735355 | ENST00000317243.10 | chr19_2835289_+ | 2258 | -1412.60 | -1408.70 | -1526.70 |
| ADediting_735356 | ENST00000317243.10 | chr19_2835295_+ | 2264 | -1409.80 | -1408.70 | -1526.70 |
| ADediting_735357 | ENST00000317243.10 | chr19_2835315_+ | 2284 | -1408.70 | -1408.70 | -1526.70 |
| ADediting_735358 | ENST00000317243.10 | chr19_2835322_+ | 2291 | -1408.30 | -1408.70 | -1526.70 |
| ADediting_735359 | ENST00000317243.10 | chr19_2835325_+ | 2294 | -1408.40 | -1408.70 | -1526.70 |
| ADediting_735360 | ENST00000317243.10 | chr19_2835351_+ | 2320 | -1408.40 | -1408.70 | -1526.70 |
| ADediting_735361 | ENST00000317243.10 | chr19_2835357_+ | 2326 | -1408.00 | -1408.70 | -1526.70 |
| ADediting_735362 | ENST00000317243.10 | chr19_2835358_+ | 2327 | -1415.40 | -1408.70 | -1526.70 |
| ADediting_735363 | ENST00000317243.10 | chr19_2835361_+ | 2330 | -1408.70 | -1408.70 | -1526.70 |
| ADediting_735364 | ENST00000317243.10 | chr19_2835365_+ | 2334 | -1412.00 | -1408.70 | -1526.70 |
| ADediting_735365 | ENST00000317243.10 | chr19_2835378_+ | 2347 | -1413.40 | -1408.70 | -1526.70 |
| ADediting_735366 | ENST00000317243.10 | chr19_2835393_+ | 2362 | -1412.00 | -1408.70 | -1526.70 |
| ADediting_735367 | ENST00000317243.10 | chr19_2835422_+ | 2391 | -1409.30 | -1408.70 | -1526.70 |
| ADediting_735368 | ENST00000317243.10 | chr19_2835509_+ | 2478 | -1409.40 | -1408.70 | -1526.70 |
| ADediting_735369 | ENST00000317243.10 | chr19_2835518_+ | 2487 | -1410.80 | -1408.70 | -1526.70 |
| ADediting_735370 | ENST00000317243.10 | chr19_2835568_+ | 2537 | -1409.60 | -1408.70 | -1526.70 |
| ADediting_735371 | ENST00000317243.10 | chr19_2835569_+ | 2538 | -1409.60 | -1408.70 | -1526.70 |
| ADediting_735372 | ENST00000317243.10 | chr19_2835570_+ | 2539 | -1408.80 | -1408.70 | -1526.70 |
| ADediting_735373 | ENST00000317243.10 | chr19_2835582_+ | 2551 | -1407.40 | -1408.70 | -1526.70 |
| ADediting_735374 | ENST00000317243.10 | chr19_2835585_+ | 2554 | -1412.80 | -1408.70 | -1526.70 |
| ADediting_735375 | ENST00000317243.10 | chr19_2835856_+ | 2825 | -1414.10 | -1408.70 | -1526.70 |
| ADediting_1554563 | ENST00000317243.10 | chr19_2835868_+ | 2837 | -1408.70 | -1408.70 | -1526.70 |
| ADediting_735376 | ENST00000317243.10 | chr19_2835875_+ | 2844 | -1408.70 | -1408.70 | -1526.70 |
| ADediting_735377 | ENST00000317243.10 | chr19_2835880_+ | 2849 | -1408.00 | -1408.70 | -1526.70 |
| ADediting_735378 | ENST00000317243.10 | chr19_2835894_+ | 2863 | -1414.60 | -1408.70 | -1526.70 |
| ADediting_735379 | ENST00000317243.10 | chr19_2835928_+ | 2897 | -1408.00 | -1408.70 | -1526.70 |
| ADediting_735380 | ENST00000317243.10 | chr19_2835929_+ | 2898 | -1411.30 | -1408.70 | -1526.70 |
| ADediting_735381 | ENST00000317243.10 | chr19_2835932_+ | 2901 | -1411.30 | -1408.70 | -1526.70 |
| ADediting_735382 | ENST00000317243.10 | chr19_2835933_+ | 2902 | -1409.00 | -1408.70 | -1526.70 |
| ADediting_735383 | ENST00000317243.10 | chr19_2835941_+ | 2910 | -1412.60 | -1408.70 | -1526.70 |
| ADediting_735384 | ENST00000317243.10 | chr19_2835946_+ | 2915 | -1408.00 | -1408.70 | -1526.70 |
| ADediting_735385 | ENST00000317243.10 | chr19_2835968_+ | 2937 | -1408.70 | -1408.70 | -1526.70 |
| ADediting_735386 | ENST00000317243.10 | chr19_2835989_+ | 2958 | -1414.10 | -1408.70 | -1526.70 |
| ADediting_735387 | ENST00000317243.10 | chr19_2835993_+ | 2962 | -1414.90 | -1408.70 | -1526.70 |
| ADediting_735388 | ENST00000317243.10 | chr19_2836034_+ | 3003 | -1408.30 | -1408.70 | -1526.70 |
| ADediting_735389 | ENST00000317243.10 | chr19_2836037_+ | 3006 | -1408.90 | -1408.70 | -1526.70 |
| ADediting_735390 | ENST00000317243.10 | chr19_2836046_+ | 3015 | -1408.00 | -1408.70 | -1526.70 |
| ADediting_735391 | ENST00000317243.10 | chr19_2836057_+ | 3026 | -1414.30 | -1408.70 | -1526.70 |
| ADediting_735392 | ENST00000317243.10 | chr19_2836058_+ | 3027 | -1410.10 | -1408.70 | -1526.70 |
| ADediting_735393 | ENST00000317243.10 | chr19_2836059_+ | 3028 | -1409.50 | -1408.70 | -1526.70 |
| ADediting_735394 | ENST00000317243.10 | chr19_2836066_+ | 3035 | -1407.80 | -1408.70 | -1526.70 |
| ADediting_735395 | ENST00000317243.10 | chr19_2836071_+ | 3040 | -1408.60 | -1408.70 | -1526.70 |
| ADediting_735396 | ENST00000317243.10 | chr19_2836072_+ | 3041 | -1409.60 | -1408.70 | -1526.70 |
| ADediting_735397 | ENST00000317243.10 | chr19_2836075_+ | 3044 | -1412.60 | -1408.70 | -1526.70 |
| ADediting_735398 | ENST00000317243.10 | chr19_2836076_+ | 3045 | -1409.00 | -1408.70 | -1526.70 |
| ADediting_735399 | ENST00000317243.10 | chr19_2836084_+ | 3053 | -1414.10 | -1408.70 | -1526.70 |
| ADediting_735400 | ENST00000317243.10 | chr19_2836097_+ | 3066 | -1409.10 | -1408.70 | -1526.70 |
| ADediting_735401 | ENST00000317243.10 | chr19_2836098_+ | 3067 | -1408.80 | -1408.70 | -1526.70 |
| ADediting_735402 | ENST00000317243.10 | chr19_2836099_+ | 3068 | -1408.40 | -1408.70 | -1526.70 |
| ADediting_735403 | ENST00000317243.10 | chr19_2836111_+ | 3080 | -1408.40 | -1408.70 | -1526.70 |
RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for ZNF554 |
Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | ADediting_735288 | chr19_2826795_+ | 0.000589523724179188 | 0.194098519440511 | 0.0227668445617261 | 0.129322179906757 | 6.43648011110255e-11 | 0.360002115825862 |
| DLPFC | ADediting_735341 | chr19_2835132_+ | 4.20893432975851e-07 | 0.282609428697962 | 5.14053018733343e-11 | 0.361725794678801 | 0.215210862082883 | 0.0705884483776301 |
| DLPFC | ADediting_735351 | chr19_2835231_+ | 3.02489115106159e-05 | 0.234563869666172 | 5.80011491792466e-11 | 0.360801538806791 | 0.00901285303084326 | 0.148106414119562 |
| PCC | ADediting_735361 | chr19_2835357_+ | 1.90922603404467e-06 | 0.336717664386532 | 5.98172798798147e-05 | 0.28618972974612 | 0.297656214985379 | -0.0757472244243845 |
| PCC | ADediting_735362 | chr19_2835358_+ | 3.18621057824587e-05 | 0.29615185850156 | 9.68609972044099e-06 | 0.314039623775839 | 0.714862590247937 | -0.0266045530309266 |
Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 2.39489013282611e-22 | 0.514472924029341 | 5.5775583737322e-13 | 0.394398584521039 | 2.575749536663e-33 | 0.612543994291804 |
| AC | 6.58199319882298e-78 | 0.869436896140148 | 9.14834928542204e-75 | 0.860971338429505 | 1.38611348237391e-05 | 0.271063327353185 |
| PCC | 5.62558720693546e-74 | 0.909508992670927 | 6.82014508785993e-68 | 0.894221744625476 | 0.107127045804266 | 0.116952633102621 |
| CER | 3.99485392036454e-07 | 0.399845347191598 | 0.107325376349054 | 0.13201130284428 | 0.33535824804114 | -0.0791983135111054 |
| TCX | 8.99390195661376e-25 | 0.714991124552683 | 5.11405481876856e-25 | 0.717568216247467 | 0.0720555686795891 | -0.147298723172325 |
| FP | 1.89479818568034e-29 | 0.717530353703816 | 4.49761372675359e-28 | 0.705102478461549 | 0.0691410966481337 | 0.136550358003038 |
| IFG | 0.00350608977162813 | 0.561323976769152 | 0.0332242448809514 | 0.427095272788666 | 0.0461922582631669 | -0.402293526570256 |
| PG | 6.49582284751118e-34 | 0.742974835850557 | 2.98623938691738e-30 | 0.713594231838521 | 0.459725025778136 | -0.0545353667184961 |
| STG | 2.62434217911486e-23 | 0.838273357046568 | 7.50583245486839e-14 | 0.70457265826221 | 0.641466669861082 | 0.0515450330376014 |
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Relation with AD stages for ZNF554 |
Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
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RelatedDrugs for ZNF554 |
Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for ZNF554 |
Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |