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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited versus non-edited samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with AD stages

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene


Gene summary for CCDC124

check button Gene summary
Gene informationGene symbol

CCDC124

Gene ID

115098

Gene namecoiled-coil domain containing 124
Synonyms-
Cytomap

19p13.11

Type of geneprotein-coding
Descriptioncoiled-coil domain-containing protein 124
Modification date20200313
UniProtAcc

Q96CT7,

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID

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RNA A-to-I events for CCDC124

check buttonRNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure.
* This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage).
all structure

check button RNA editing frequencies across three data sets.
boxplot

check buttonThe number of RNA A-to-I editing events in different types of transcripts (# event, percentage).
boxplot

check button RNA A-to-I editing events in AD.
ADediting_722145(17933227, +), ADediting_722146(17934060, +), ADediting_722147(17934062, +), ADediting_722148(17934068, +), ADediting_722149(17934069, +), ADediting_722150(17934083, +), ADediting_722151(17934095, +), ADediting_722152(17934096, +), ADediting_722153(17934104, +), ADediting_722154(17934114, +), ADediting_722155(17934115, +), ADediting_722156(17934128, +), ADediting_722157(17934142, +), ADediting_722158(17934148, +), ADediting_722159(17934168, +), ADediting_722160(17934171, +), ADediting_722161(17934224, +), ADediting_722162(17934228, +), ADediting_722163(17934235, +), ADediting_722164(17934239, +), ADediting_722165(17934255, +), ADediting_722166(17934265, +), ADediting_722167(17934266, +), ADediting_722168(17934289, +), ADediting_722169(17934290, +), ADediting_722170(17934307, +), ADediting_722171(17934331, +), ADediting_722172(17934336, +), ADediting_722173(17934368, +), ADediting_722174(17934373, +), ADediting_722175(17934508, +), ADediting_722176(17934514, +), ADediting_722177(17934522, +), ADediting_722178(17934530, +), ADediting_722179(17934531, +), ADediting_722180(17934536, +), ADediting_722181(17934539, +), ADediting_722182(17934547, +), ADediting_722183(17934553, +), ADediting_722184(17934566, +), ADediting_722185(17934571, +), ADediting_722186(17934576, +), ADediting_722187(17934584, +), ADediting_722188(17934585, +), ADediting_722189(17934656, +), ADediting_722190(17934660, +), ADediting_722191(17934662, +), ADediting_722192(17934672, +), ADediting_722193(17934676, +), ADediting_722194(17934685, +), ADediting_722195(17934698, +), ADediting_722196(17934703, +), ADediting_722197(17934708, +), ADediting_722198(17934716, +), ADediting_722199(17934717, +), ADediting_722200(17934727, +), ADediting_722201(17934728, +), ADediting_722202(17934765, +), ADediting_722203(17934932, +), ADediting_722204(17934939, +), ADediting_722205(17934985, +), ADediting_722206(17934990, +), ADediting_722207(17935001, +), ADediting_722208(17935009, +), ADediting_722209(17935015, +), ADediting_722210(17935020, +), ADediting_722211(17935033, +), ADediting_722212(17935041, +), ADediting_722213(17935042, +), ADediting_722214(17935045, +), ADediting_722215(17935055, +), ADediting_722216(17935057, +), ADediting_722217(17935061, +), ADediting_722218(17935064, +), ADediting_722219(17935112, +), ADediting_722220(17935133, +), ADediting_722221(17935134, +), ADediting_722222(17935146, +), ADediting_722223(17935147, +), ADediting_722224(17935150, +), ADediting_722225(17935151, +), ADediting_722226(17935164, +), ADediting_722227(17935173, +), ADediting_722228(17935177, +), ADediting_722229(17935186, +), ADediting_722230(17935189, +), ADediting_722231(17935190, +), ADediting_722232(17935204, +), ADediting_722233(17935490, +), ADediting_722234(17935682, +), ADediting_722235(17935699, +), ADediting_722236(17935721, +), ADediting_722237(17935817, +), ADediting_722238(17935830, +), ADediting_722239(17935844, +), ADediting_722240(17935845, +), ADediting_722241(17935851, +), ADediting_722242(17935857, +), ADediting_722243(17936022, +), ADediting_722244(17936044, +), ADediting_722245(17936066, +), ADediting_722246(17936070, +), ADediting_722247(17936085, +), ADediting_722248(17936119, +), ADediting_722249(17936127, +), ADediting_722250(17936134, +), ADediting_722251(17936140, +), ADediting_722252(17936167, +), ADediting_722253(17936179, +), ADediting_722254(17937019, +), ADediting_722255(17937125, +), ADediting_722256(17937790, +), ADediting_722257(17937851, +), ADediting_722258(17937961, +), ADediting_722259(17937962, +), ADediting_722260(17937995, +), ADediting_722261(17937996, +), ADediting_722262(17938071, +), ADediting_722263(17938084, +), ADediting_722264(17938130, +), ADediting_722265(17938255, +), ADediting_722266(17938284, +), ADediting_722267(17938289, +), ADediting_722268(17938291, +), ADediting_722269(17938653, +), ADediting_722270(17938659, +), ADediting_722271(17938661, +), ADediting_722272(17938695, +), ADediting_722273(17938709, +), ADediting_722274(17938807, +), ADediting_722275(17938873, +), ADediting_722276(17939274, +), ADediting_722277(17939752, +), ADediting_722278(17939968, +), ADediting_722279(17939984, +), ADediting_722280(17940093, +), ADediting_722281(17940096, +), ADediting_722282(17940148, +), ADediting_722283(17940175, +), ADediting_722284(17940555, +), ADediting_722285(17940583, +), ADediting_1553297(17934162, +), ADediting_1553298(17934173, +), ADediting_1553299(17934230, +), ADediting_1553300(17934579, +), ADediting_1553301(17934933, +),

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RNA editing positional annotations for CCDC124 using Annovar

check button Protein coding RNA editing(s).
ADeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
ADeditome IDPositionVariant type
ADediting_722145chr19_17933227_+intronic
ADediting_722146chr19_17934060_+intronic
ADediting_722147chr19_17934062_+intronic
ADediting_722148chr19_17934068_+intronic
ADediting_722149chr19_17934069_+intronic
ADediting_722150chr19_17934083_+intronic
ADediting_722151chr19_17934095_+intronic
ADediting_722152chr19_17934096_+intronic
ADediting_722153chr19_17934104_+intronic
ADediting_722154chr19_17934114_+intronic
ADediting_722155chr19_17934115_+intronic
ADediting_722156chr19_17934128_+intronic
ADediting_722157chr19_17934142_+intronic
ADediting_722158chr19_17934148_+intronic
ADediting_722159chr19_17934168_+intronic
ADediting_722160chr19_17934171_+intronic
ADediting_722161chr19_17934224_+intronic
ADediting_722162chr19_17934228_+intronic
ADediting_722163chr19_17934235_+intronic
ADediting_722164chr19_17934239_+intronic
ADediting_722165chr19_17934255_+intronic
ADediting_722166chr19_17934265_+intronic
ADediting_722167chr19_17934266_+intronic
ADediting_722168chr19_17934289_+intronic
ADediting_722169chr19_17934290_+intronic
ADediting_722170chr19_17934307_+intronic
ADediting_722171chr19_17934331_+intronic
ADediting_722172chr19_17934336_+intronic
ADediting_722173chr19_17934368_+intronic
ADediting_722174chr19_17934373_+intronic
ADediting_722175chr19_17934508_+intronic
ADediting_722176chr19_17934514_+intronic
ADediting_722177chr19_17934522_+intronic
ADediting_722178chr19_17934530_+intronic
ADediting_722179chr19_17934531_+intronic
ADediting_722180chr19_17934536_+intronic
ADediting_722181chr19_17934539_+intronic
ADediting_722182chr19_17934547_+intronic
ADediting_722183chr19_17934553_+intronic
ADediting_722184chr19_17934566_+intronic
ADediting_722185chr19_17934571_+intronic
ADediting_722186chr19_17934576_+intronic
ADediting_722187chr19_17934584_+intronic
ADediting_722188chr19_17934585_+intronic
ADediting_722189chr19_17934656_+intronic
ADediting_722190chr19_17934660_+intronic
ADediting_722191chr19_17934662_+intronic
ADediting_722192chr19_17934672_+intronic
ADediting_722193chr19_17934676_+intronic
ADediting_722194chr19_17934685_+intronic
ADediting_722195chr19_17934698_+intronic
ADediting_722196chr19_17934703_+intronic
ADediting_722197chr19_17934708_+intronic
ADediting_722198chr19_17934716_+intronic
ADediting_722199chr19_17934717_+intronic
ADediting_722200chr19_17934727_+intronic
ADediting_722201chr19_17934728_+intronic
ADediting_722202chr19_17934765_+intronic
ADediting_722203chr19_17934932_+intronic
ADediting_722204chr19_17934939_+intronic
ADediting_722205chr19_17934985_+intronic
ADediting_722206chr19_17934990_+intronic
ADediting_722207chr19_17935001_+intronic
ADediting_722208chr19_17935009_+intronic
ADediting_722209chr19_17935015_+intronic
ADediting_722210chr19_17935020_+intronic
ADediting_722211chr19_17935033_+intronic
ADediting_722212chr19_17935041_+intronic
ADediting_722213chr19_17935042_+intronic
ADediting_722214chr19_17935045_+intronic
ADediting_722215chr19_17935055_+intronic
ADediting_722216chr19_17935057_+intronic
ADediting_722217chr19_17935061_+intronic
ADediting_722218chr19_17935064_+intronic
ADediting_722219chr19_17935112_+UTR5
ADediting_722220chr19_17935133_+UTR5
ADediting_722221chr19_17935134_+UTR5
ADediting_722222chr19_17935146_+UTR5
ADediting_722223chr19_17935147_+UTR5
ADediting_722224chr19_17935150_+UTR5
ADediting_722225chr19_17935151_+UTR5
ADediting_722226chr19_17935164_+UTR5
ADediting_722227chr19_17935173_+UTR5
ADediting_722228chr19_17935177_+UTR5
ADediting_722229chr19_17935186_+UTR5
ADediting_722230chr19_17935189_+UTR5
ADediting_722231chr19_17935190_+UTR5
ADediting_722232chr19_17935204_+intronic
ADediting_722233chr19_17935490_+intronic
ADediting_722234chr19_17935682_+intronic
ADediting_722235chr19_17935699_+intronic
ADediting_722236chr19_17935721_+intronic
ADediting_722237chr19_17935817_+intronic
ADediting_722238chr19_17935830_+intronic
ADediting_722239chr19_17935844_+intronic
ADediting_722240chr19_17935845_+intronic
ADediting_722241chr19_17935851_+intronic
ADediting_722242chr19_17935857_+intronic
ADediting_722243chr19_17936022_+intronic
ADediting_722244chr19_17936044_+intronic
ADediting_722245chr19_17936066_+intronic
ADediting_722246chr19_17936070_+intronic
ADediting_722247chr19_17936085_+intronic
ADediting_722248chr19_17936119_+intronic
ADediting_722249chr19_17936127_+intronic
ADediting_722250chr19_17936134_+intronic
ADediting_722251chr19_17936140_+intronic
ADediting_722252chr19_17936167_+intronic
ADediting_722253chr19_17936179_+intronic
ADediting_722254chr19_17937019_+intronic
ADediting_722255chr19_17937125_+intronic
ADediting_722256chr19_17937790_+intronic
ADediting_722257chr19_17937851_+intronic
ADediting_722258chr19_17937961_+intronic
ADediting_722259chr19_17937962_+intronic
ADediting_722260chr19_17937995_+intronic
ADediting_722261chr19_17937996_+intronic
ADediting_722262chr19_17938071_+intronic
ADediting_722263chr19_17938084_+intronic
ADediting_722264chr19_17938130_+intronic
ADediting_722265chr19_17938255_+intronic
ADediting_722266chr19_17938284_+intronic
ADediting_722267chr19_17938289_+intronic
ADediting_722268chr19_17938291_+intronic
ADediting_722269chr19_17938653_+intronic
ADediting_722270chr19_17938659_+intronic
ADediting_722271chr19_17938661_+intronic
ADediting_722272chr19_17938695_+intronic
ADediting_722273chr19_17938709_+intronic
ADediting_722274chr19_17938807_+intronic
ADediting_722275chr19_17938873_+intronic
ADediting_722276chr19_17939274_+intronic
ADediting_722277chr19_17939752_+intronic
ADediting_722278chr19_17939968_+intronic
ADediting_722279chr19_17939984_+intronic
ADediting_722280chr19_17940093_+intronic
ADediting_722281chr19_17940096_+intronic
ADediting_722282chr19_17940148_+intronic
ADediting_722283chr19_17940175_+intronic
ADediting_722284chr19_17940555_+intronic
ADediting_722285chr19_17940583_+intronic
ADediting_1553297chr19_17934162_+intronic
ADediting_1553298chr19_17934173_+intronic
ADediting_1553299chr19_17934230_+intronic
ADediting_1553300chr19_17934579_+intronic
ADediting_1553301chr19_17934933_+intronic

check button Repat-regional RNA editing(s).
ADeditome IDPositionRepeat familyRepeat sub familyRepeat name
ADediting_722146chr19_17934060_+SINEAluName=AluSx1
ADediting_722147chr19_17934062_+SINEAluName=AluSx1
ADediting_722148chr19_17934068_+SINEAluName=AluSx1
ADediting_722149chr19_17934069_+SINEAluName=AluSx1
ADediting_722150chr19_17934083_+SINEAluName=AluSx1
ADediting_722151chr19_17934095_+SINEAluName=AluSx1
ADediting_722152chr19_17934096_+SINEAluName=AluSx1
ADediting_722153chr19_17934104_+SINEAluName=AluSx1
ADediting_722154chr19_17934114_+SINEAluName=AluSx1
ADediting_722155chr19_17934115_+SINEAluName=AluSx1
ADediting_722156chr19_17934128_+SINEAluName=AluSx1
ADediting_722157chr19_17934142_+SINEAluName=AluSx1
ADediting_722158chr19_17934148_+SINEAluName=AluSx1
ADediting_722159chr19_17934168_+SINEAluName=AluSx1
ADediting_722160chr19_17934171_+SINEAluName=AluSx1
ADediting_722161chr19_17934224_+SINEAluName=AluSx1
ADediting_722162chr19_17934228_+SINEAluName=AluSx1
ADediting_722163chr19_17934235_+SINEAluName=AluSx1
ADediting_722164chr19_17934239_+SINEAluName=AluSx1
ADediting_722165chr19_17934255_+SINEAluName=AluSx1
ADediting_722166chr19_17934265_+SINEAluName=AluSx1
ADediting_722167chr19_17934266_+SINEAluName=AluSx1
ADediting_722168chr19_17934289_+SINEAluName=AluSx1
ADediting_722169chr19_17934290_+SINEAluName=AluSx1
ADediting_722170chr19_17934307_+SINEAluName=AluSx1
ADediting_722171chr19_17934331_+SINEAluName=AluSx1
ADediting_722172chr19_17934336_+SINEAluName=AluSx1
ADediting_722173chr19_17934368_+SINEAluName=AluSx1
ADediting_722174chr19_17934373_+SINEAluName=AluSx1
ADediting_722175chr19_17934508_+SINEAluName=AluJb
ADediting_722176chr19_17934514_+SINEAluName=AluJb
ADediting_722177chr19_17934522_+SINEAluName=AluJb
ADediting_722178chr19_17934530_+SINEAluName=AluJb
ADediting_722179chr19_17934531_+SINEAluName=AluJb
ADediting_722180chr19_17934536_+SINEAluName=AluJb
ADediting_722181chr19_17934539_+SINEAluName=AluJb
ADediting_722182chr19_17934547_+SINEAluName=AluJb
ADediting_722183chr19_17934553_+SINEAluName=AluJb
ADediting_722184chr19_17934566_+SINEAluName=AluJb
ADediting_722185chr19_17934571_+SINEAluName=AluJb
ADediting_722186chr19_17934576_+SINEAluName=AluJb
ADediting_722187chr19_17934584_+SINEAluName=AluJb
ADediting_722188chr19_17934585_+SINEAluName=AluJb
ADediting_722189chr19_17934656_+SINEAluName=AluJb
ADediting_722190chr19_17934660_+SINEAluName=AluJb
ADediting_722191chr19_17934662_+SINEAluName=AluJb
ADediting_722192chr19_17934672_+SINEAluName=AluJb
ADediting_722193chr19_17934676_+SINEAluName=AluJb
ADediting_722194chr19_17934685_+SINEAluName=AluJb
ADediting_722195chr19_17934698_+SINEAluName=AluJb
ADediting_722196chr19_17934703_+SINEAluName=AluJb
ADediting_722197chr19_17934708_+SINEAluName=AluJb
ADediting_722198chr19_17934716_+SINEAluName=AluJb
ADediting_722199chr19_17934717_+SINEAluName=AluJb
ADediting_722200chr19_17934727_+SINEAluName=AluJb
ADediting_722201chr19_17934728_+SINEAluName=AluJb
ADediting_722202chr19_17934765_+SINEAluName=AluJb
ADediting_722203chr19_17934932_+SINEAluName=AluJr
ADediting_722204chr19_17934939_+SINEAluName=AluJr
ADediting_722205chr19_17934985_+SINEAluName=AluJr
ADediting_722206chr19_17934990_+SINEAluName=AluJr
ADediting_722207chr19_17935001_+SINEAluName=AluJr
ADediting_722208chr19_17935009_+SINEAluName=AluJr
ADediting_722209chr19_17935015_+SINEAluName=AluJr
ADediting_722210chr19_17935020_+SINEAluName=AluJr
ADediting_722211chr19_17935033_+SINEAluName=AluJr
ADediting_722212chr19_17935041_+SINEAluName=AluJr
ADediting_722213chr19_17935042_+SINEAluName=AluJr
ADediting_722214chr19_17935045_+SINEAluName=AluJr
ADediting_722215chr19_17935055_+SINEAluName=AluJr
ADediting_722216chr19_17935057_+SINEAluName=AluJr
ADediting_722217chr19_17935061_+SINEAluName=AluJr
ADediting_722218chr19_17935064_+SINEAluName=AluJr
ADediting_722219chr19_17935112_+SINEAluName=AluJr
ADediting_722220chr19_17935133_+SINEAluName=AluJr
ADediting_722221chr19_17935134_+SINEAluName=AluJr
ADediting_722222chr19_17935146_+SINEAluName=AluJr
ADediting_722223chr19_17935147_+SINEAluName=AluJr
ADediting_722224chr19_17935150_+SINEAluName=AluJr
ADediting_722225chr19_17935151_+SINEAluName=AluJr
ADediting_722226chr19_17935164_+SINEAluName=AluJr
ADediting_722227chr19_17935173_+SINEAluName=AluJr
ADediting_722228chr19_17935177_+SINEAluName=AluJr
ADediting_722229chr19_17935186_+SINEAluName=AluJr
ADediting_722230chr19_17935189_+SINEAluName=AluJr
ADediting_722231chr19_17935190_+SINEAluName=AluJr
ADediting_722232chr19_17935204_+SINEAluName=AluJr
ADediting_722233chr19_17935490_+SINEAluName=AluSx
ADediting_722234chr19_17935682_+SINEAluName=AluSx1
ADediting_722235chr19_17935699_+SINEAluName=AluSx1
ADediting_722236chr19_17935721_+SINEAluName=AluSx1
ADediting_722237chr19_17935817_+SINEAluName=AluSx1
ADediting_722238chr19_17935830_+SINEAluName=AluSx1
ADediting_722239chr19_17935844_+SINEAluName=AluSx1
ADediting_722240chr19_17935845_+SINEAluName=AluSx1
ADediting_722241chr19_17935851_+SINEAluName=AluSx1
ADediting_722242chr19_17935857_+SINEAluName=AluSx1
ADediting_722243chr19_17936022_+SINEAluName=AluSz
ADediting_722244chr19_17936044_+SINEAluName=AluSz
ADediting_722245chr19_17936066_+SINEAluName=AluSz
ADediting_722246chr19_17936070_+SINEAluName=AluSz
ADediting_722247chr19_17936085_+SINEAluName=AluSz
ADediting_722248chr19_17936119_+SINEAluName=AluSz
ADediting_722249chr19_17936127_+SINEAluName=AluSz
ADediting_722250chr19_17936134_+SINEAluName=AluSz
ADediting_722251chr19_17936140_+SINEAluName=AluSz
ADediting_722252chr19_17936167_+SINEAluName=AluSz
ADediting_722253chr19_17936179_+SINEAluName=AluSz
ADediting_722254chr19_17937019_+SINEAluName=AluSx1
ADediting_722255chr19_17937125_+SINEAluName=AluSx1
ADediting_722256chr19_17937790_+SINEAluName=AluSp
ADediting_722257chr19_17937851_+SINEAluName=AluSp
ADediting_722258chr19_17937961_+SINEAluName=AluSp
ADediting_722259chr19_17937962_+SINEAluName=AluSp
ADediting_722260chr19_17937995_+SINEAluName=AluSp
ADediting_722261chr19_17937996_+SINEAluName=AluSp
ADediting_722262chr19_17938071_+SINEAluName=AluJr
ADediting_722263chr19_17938084_+SINEAluName=AluJr
ADediting_722264chr19_17938130_+SINEAluName=AluJr
ADediting_722265chr19_17938255_+SINEAluName=AluJr
ADediting_722266chr19_17938284_+SINEAluName=AluJr
ADediting_722267chr19_17938289_+SINEAluName=AluJr
ADediting_722268chr19_17938291_+SINEAluName=AluJr
ADediting_722269chr19_17938653_+SINEAluName=AluJb
ADediting_722270chr19_17938659_+SINEAluName=AluJb
ADediting_722271chr19_17938661_+SINEAluName=AluJb
ADediting_722272chr19_17938695_+SINEAluName=AluJb
ADediting_722273chr19_17938709_+SINEAluName=AluJb
ADediting_722274chr19_17938807_+SINEAluName=AluJb
ADediting_722275chr19_17938873_+SINEAluName=AluJb
ADediting_722276chr19_17939274_+SINEAluName=AluSx
ADediting_722277chr19_17939752_+SINEAluName=AluSz
ADediting_722278chr19_17939968_+SINEAluName=AluSz
ADediting_722279chr19_17939984_+SINEAluName=AluSz
ADediting_722280chr19_17940093_+SINEAluName=AluSz
ADediting_722281chr19_17940096_+SINEAluName=AluSz
ADediting_722282chr19_17940148_+SINEAluName=AluSz
ADediting_722283chr19_17940175_+SINEAluName=AluSz
ADediting_722284chr19_17940555_+SINEAluName=AluSx3
ADediting_722285chr19_17940583_+SINEAluName=AluSx3
ADediting_1553297chr19_17934162_+SINEAluName=AluSx1
ADediting_1553298chr19_17934173_+SINEAluName=AluSx1
ADediting_1553299chr19_17934230_+SINEAluName=AluSx1
ADediting_1553300chr19_17934579_+SINEAluName=AluJb
ADediting_1553301chr19_17934933_+SINEAluName=AluJr

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RNA A-to-I editing events in the alternative splicing sites for CCDC124

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeADeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength
ESADediting_722230chr19_17935189_+17935189:179351975ss3eAACGTGAGT9.54GACGTGAGT9.22
ESADediting_722230chr19_17935189_+17935189:179351975ss3eAACGTGAGT9.54GACGTGAGT9.22
ESADediting_722230chr19_17935189_+17935189:179351975ss3eAACGTGAGT9.54GACGTGAGT9.22
ESADediting_722231chr19_17935190_+17935189:179351975ss2eAACGTGAGT9.54AGCGTGAGT8.20
ESADediting_722231chr19_17935190_+17935189:179351975ss2eAACGTGAGT9.54AGCGTGAGT8.20
ESADediting_722231chr19_17935190_+17935189:179351975ss2eAACGTGAGT9.54AGCGTGAGT8.20

check button Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for CCDC124

check button Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event.
* The grey color means N/A.

check button Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event.
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check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
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check button - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples.
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ADeditome IDChrPositoingSkipped exonENSGENSTs

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Protein coding region RNA A-to-I editings for CCDC124

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for CCDC124


check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for CCDC124

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.
ENST00000597436.5protein_codingSoverviewSoverview

check button RNA A-to-I editing in miRNA.
ADeditom_IDENSTmir_IDEditing_InformationEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

check button RNA A-to-I editing in mRNA.
ADeditom_IDENSTEditing_InformationEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI
ADediting_722219ENST00000597436.5chr19_17935112_+17-435.90-435.90-444.10
ADediting_722220ENST00000597436.5chr19_17935133_+38-438.40-435.90-444.10
ADediting_722221ENST00000597436.5chr19_17935134_+39-439.40-435.90-444.10
ADediting_722222ENST00000597436.5chr19_17935146_+51-436.10-435.90-444.10
ADediting_722223ENST00000597436.5chr19_17935147_+52-438.80-435.90-444.10
ADediting_722224ENST00000597436.5chr19_17935150_+55-439.40-435.90-444.10
ADediting_722225ENST00000597436.5chr19_17935151_+56-436.40-435.90-444.10
ADediting_722226ENST00000597436.5chr19_17935164_+69-439.00-435.90-444.10
ADediting_722227ENST00000597436.5chr19_17935173_+78-436.40-435.90-444.10
ADediting_722228ENST00000597436.5chr19_17935177_+82-435.20-435.90-444.10
ADediting_722229ENST00000597436.5chr19_17935186_+91-435.90-435.90-444.10
ADediting_722230ENST00000597436.5chr19_17935189_+94-435.90-435.90-444.10
ADediting_722231ENST00000597436.5chr19_17935190_+95-435.60-435.90-444.10

check button RNA A-to-I editing in lncRNA.
ADeditom_IDENSTEditing_InformationEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for CCDC124

check button Correlation between ADAR gene expression and RNA editing frequency
TissueADeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
DLPFCADediting_722155chr19_17934115_+0.4713718510051690.04105598528122730.376769516007795-0.05037172839988711.10421097396392e-170.460574526000016
DLPFCADediting_722158chr19_17934148_+0.05656419086698650.1084097912099710.1388297176707540.08425844077831892.10658835997158e-080.311534030892216
DLPFCADediting_722168chr19_17934289_+0.1654850695449040.07896419330489220.9033582234086050.006924092568196721.46171578433895e-130.403414471316169
CERADediting_722175chr19_17934508_+0.02539446646879910.1825064785888796.56322422487979e-060.35870396391580.04253813571132720.165841962982527
CERADediting_722182chr19_17934547_+0.09047216039370750.1387170507455610.0001279863753332640.3076947576666390.2106148681915260.102804235962445
DLPFCADediting_722186chr19_17934576_+0.1448558359378760.08299804508008480.4098598730114460.04697193368084093.7654337688851e-080.306166446457263
DLPFCADediting_722187chr19_17934584_+0.2252878530168180.06906704543898340.900953540319097-0.007097257931576531.35137603927561e-090.335573518644809
DLPFCADediting_722189chr19_17934656_+0.01616762916450250.1365124276609480.7428137629683870.01871045640371833.32851803538779e-170.454456265347761
DLPFCADediting_722190chr19_17934660_+0.1054785187572430.09212131296377650.8596802645696690.01008096642891961.02172536984392e-100.356426528455717
DLPFCADediting_722191chr19_17934662_+0.3503006474814530.05322539886015560.386261901032022-0.04937859214659692.43341984603851e-130.400015081142965
DLPFCADediting_722192chr19_17934672_+0.5399238756751670.03494250392108960.337829422375694-0.05461702784213412.48865417205292e-120.383994272448636
DLPFCADediting_722193chr19_17934676_+0.5747647406643520.03198645374981050.251620362876888-0.06530671720118116.07802471133411e-130.393810613244001
DLPFCADediting_722197chr19_17934708_+0.3167296153480110.05704853809717850.795990135614722-0.01474284813931444.84814298027728e-100.344037061832314
TCXADediting_722225chr19_17935151_+0.01758070203906610.1936446780987768.29402187022987e-070.3896360844543920.0184086960118065-0.192281117130456
DLPFCADediting_722233chr19_17935490_+0.06505878983028540.1049151498218780.9125361805543630.006263741836349643.36901189356815e-120.38184176663312

check button Correlation between ADAR gene expression and this gene's expression
TissueADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
DLPFC1.07584994590371e-150.4343381708182766.40701902648056e-320.6017530388614286.94260089878885e-060.252203524763972
AC6.12554721546866e-340.6700115544162342.87645181227005e-250.5943440862415365.80119016704928e-260.601235389605552
PCC6.02706660094524e-250.656725494437921.11227102425073e-290.702064713009530.02025752682814940.167888955130341
CER0.07198351160159060.1473356171536541.80634706121192e-060.3783668651779220.008006535725057760.215766524503355
TCX2.78110644761493e-070.4047827049287211.86970688417381e-080.4392841132950860.533834254237460.0511943883707074
FP1.77664990414895e-080.4066481093810980.978543148236601-0.002030198049809780.0005166860859497320.257641729473769
IFG3.22140622088166e-070.8281466244324883.82479582299627e-070.8253394545629240.3104770642975280.211361788216117
STG1.38339132866241e-100.6297845747710880.002652928234963170.3238743960563760.4402490170298290.0853321637618145

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Relation with AD stages for CCDC124

check button Correlation between AD stages and RNA editing frequency
TissueADeditomIDpositionP-valCoeff.
CERADediting_722220chr19_17935133_+0.001143049042093980.308896427781604

check button Correlation between AD stages and this gene's expression
TissueP-valCoeff.

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RelatedDrugs for CCDC124

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.0 2018-04-02)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for CCDC124

check button Diseases associated with this gene.
(DisGeNet 4.0)
GeneDisease IDDisease name# pubmedsSource