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| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for NT5C3B |
 Gene summary |
| Gene information | Gene symbol | NT5C3B | Gene ID | 115024 |
| Gene name | 5'-nucleotidase, cytosolic IIIB | |
| Synonyms | NT5C3L|cN-IIIB | |
| Cytomap | 17q21.2 | |
| Type of gene | protein-coding | |
| Description | 7-methylguanosine phosphate-specific 5'-nucleotidase5'-nucleotidase, cytosolic III-like7-methylguanosine nucleotidaseN(7)-methylguanylate 5'-phosphatasecN-III-like proteincytosolic 5'-nucleotidase 3Bcytosolic 5'-nucleotidase III-like protein | |
| Modification date | 20200320 | |
| UniProtAcc | Q969T7, | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
Top |
RNA A-to-I events for NT5C3B |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA editing frequencies across three data sets. |
 |
| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA A-to-I editing events in AD. |
| ADediting_620654(41825947, -), ADediting_620655(41825961, -), ADediting_620656(41825981, -), ADediting_620657(41826031, -), ADediting_620658(41826033, -), ADediting_620659(41826043, -), ADediting_620660(41826055, -), ADediting_620661(41826073, -), ADediting_620662(41826074, -), ADediting_620663(41826088, -), ADediting_620664(41826099, -), ADediting_620665(41826117, -), ADediting_620666(41826134, -), ADediting_620667(41826150, -), ADediting_620668(41826154, -), ADediting_620669(41826246, -), ADediting_620670(41826262, -), ADediting_620671(41826266, -), ADediting_620672(41826286, -), ADediting_620673(41826291, -), ADediting_620674(41826292, -), ADediting_620675(41826306, -), ADediting_620676(41826313, -), ADediting_620677(41826316, -), ADediting_620678(41826321, -), ADediting_620679(41826331, -), ADediting_620680(41826335, -), ADediting_620681(41826339, -), ADediting_620682(41826345, -), ADediting_620683(41826348, -), ADediting_620684(41826352, -), ADediting_620685(41826362, -), ADediting_620686(41826387, -), ADediting_620687(41826422, -), ADediting_620688(41826424, -), ADediting_620689(41826436, -), ADediting_620690(41826441, -), ADediting_620691(41826442, -), ADediting_620692(41826450, -), ADediting_620693(41826460, -), ADediting_620694(41826474, -), ADediting_620695(41826518, -), ADediting_620696(41826559, -), ADediting_620697(41826633, -), ADediting_620698(41826661, -), ADediting_620699(41826687, -), ADediting_620700(41826692, -), ADediting_620701(41826744, -), ADediting_620702(41826756, -), ADediting_620703(41826766, -), ADediting_620704(41826784, -), ADediting_620705(41826789, -), ADediting_620706(41826818, -), ADediting_620707(41826876, -), ADediting_620708(41826878, -), ADediting_620709(41826888, -), ADediting_620710(41826900, -), ADediting_620711(41826917, -), ADediting_620712(41826918, -), ADediting_620713(41826924, -), ADediting_620714(41826931, -), ADediting_620715(41826937, -), ADediting_620716(41826974, -), ADediting_620717(41827117, -), ADediting_620718(41827198, -), ADediting_620719(41828434, -), ADediting_620720(41828474, -), ADediting_620721(41828501, -), ADediting_620722(41828502, -), ADediting_620723(41828525, -), ADediting_620724(41828540, -), ADediting_620725(41828550, -), ADediting_620726(41828564, -), ADediting_620727(41829124, -), ADediting_620728(41829150, -), ADediting_620729(41830426, -), ADediting_620730(41830447, -), ADediting_620731(41830462, -), ADediting_620732(41830483, -), ADediting_620733(41832642, -), ADediting_620734(41832650, -), ADediting_620735(41832651, -), ADediting_620736(41832656, -), ADediting_620737(41832663, -), ADediting_620738(41832702, -), ADediting_620739(41832721, -), ADediting_620740(41832744, -), ADediting_620741(41832746, -), ADediting_620742(41832784, -), ADediting_620743(41832811, -), ADediting_620744(41833422, -), ADediting_620745(41833426, -), ADediting_620746(41833445, -), ADediting_620747(41833454, -), ADediting_620748(41833455, -), ADediting_620749(41833471, -), ADediting_620750(41833481, -), ADediting_620751(41833488, -), ADediting_620752(41833491, -), ADediting_620753(41833493, -), ADediting_620754(41833494, -), ADediting_620755(41833495, -), ADediting_620756(41833496, -), ADediting_620757(41833497, -), ADediting_620758(41833511, -), ADediting_620759(41833545, -), ADediting_620760(41833550, -), ADediting_620761(41833560, -), ADediting_620762(41833591, -), ADediting_620763(41833592, -), ADediting_620764(41834133, -), ADediting_620765(41834139, -), ADediting_620766(41834151, -), ADediting_620767(41834179, -), ADediting_620768(41834185, -), ADediting_620769(41834213, -), ADediting_620770(41834223, -), ADediting_620771(41834233, -), ADediting_620772(41834248, -), ADediting_620773(41834271, -), ADediting_620774(41834274, -), ADediting_620775(41834284, -), ADediting_620776(41834296, -), ADediting_620777(41834303, -), ADediting_620778(41834309, -), ADediting_620779(41834314, -), ADediting_620780(41834335, -), ADediting_620781(41834363, -), ADediting_620782(41834380, -), ADediting_620783(41834530, -), ADediting_620784(41834667, -), ADediting_620785(41834730, -), ADediting_1546419(41826152, -), ADediting_1546420(41826257, -), ADediting_1546421(41826271, -), ADediting_1546422(41826300, -), ADediting_1546423(41826427, -), ADediting_1546424(41826439, -), ADediting_1546425(41826455, -), ADediting_1546426(41826469, -), ADediting_1546427(41826557, -), ADediting_1546428(41826683, -), ADediting_1546429(41826796, -), ADediting_1546430(41826953, -), ADediting_1546431(41826969, -), ADediting_1546432(41827062, -), ADediting_1546433(41827125, -), ADediting_1546434(41827184, -), ADediting_1546435(41827194, -), ADediting_1546436(41828475, -), ADediting_1546437(41828510, -), ADediting_1546438(41828515, -), ADediting_1546439(41828530, -), ADediting_1546440(41828538, -), ADediting_1546441(41828609, -), ADediting_1546442(41832676, -), ADediting_1546443(41832696, -), ADediting_1546444(41833519, -), ADediting_1546445(41833521, -), ADediting_1546446(41833531, -), ADediting_1546447(41833542, -), ADediting_1546448(41833586, -), ADediting_1546449(41834230, -), ADediting_1546450(41834542, -), ADediting_1546451(41834543, -), ADediting_1546452(41834567, -), ADediting_1546453(41834623, -), ADediting_1546454(41834626, -), ADediting_1546455(41834673, -), ADediting_1546456(41834710, -), |
Top |
RNA editing positional annotations for NT5C3B using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_620654 | chr17_41825947_- | intronic |
| ADediting_620655 | chr17_41825961_- | intronic |
| ADediting_620656 | chr17_41825981_- | intronic |
| ADediting_620657 | chr17_41826031_- | intronic |
| ADediting_620658 | chr17_41826033_- | intronic |
| ADediting_620659 | chr17_41826043_- | intronic |
| ADediting_620660 | chr17_41826055_- | intronic |
| ADediting_620661 | chr17_41826073_- | intronic |
| ADediting_620662 | chr17_41826074_- | intronic |
| ADediting_620663 | chr17_41826088_- | intronic |
| ADediting_620664 | chr17_41826099_- | intronic |
| ADediting_620665 | chr17_41826117_- | intronic |
| ADediting_620666 | chr17_41826134_- | intronic |
| ADediting_620667 | chr17_41826150_- | intronic |
| ADediting_620668 | chr17_41826154_- | intronic |
| ADediting_620669 | chr17_41826246_- | intronic |
| ADediting_620670 | chr17_41826262_- | intronic |
| ADediting_620671 | chr17_41826266_- | intronic |
| ADediting_620672 | chr17_41826286_- | intronic |
| ADediting_620673 | chr17_41826291_- | intronic |
| ADediting_620674 | chr17_41826292_- | intronic |
| ADediting_620675 | chr17_41826306_- | intronic |
| ADediting_620676 | chr17_41826313_- | intronic |
| ADediting_620677 | chr17_41826316_- | intronic |
| ADediting_620678 | chr17_41826321_- | intronic |
| ADediting_620679 | chr17_41826331_- | intronic |
| ADediting_620680 | chr17_41826335_- | intronic |
| ADediting_620681 | chr17_41826339_- | intronic |
| ADediting_620682 | chr17_41826345_- | intronic |
| ADediting_620683 | chr17_41826348_- | intronic |
| ADediting_620684 | chr17_41826352_- | intronic |
| ADediting_620685 | chr17_41826362_- | intronic |
| ADediting_620686 | chr17_41826387_- | intronic |
| ADediting_620687 | chr17_41826422_- | intronic |
| ADediting_620688 | chr17_41826424_- | intronic |
| ADediting_620689 | chr17_41826436_- | intronic |
| ADediting_620690 | chr17_41826441_- | intronic |
| ADediting_620691 | chr17_41826442_- | intronic |
| ADediting_620692 | chr17_41826450_- | intronic |
| ADediting_620693 | chr17_41826460_- | intronic |
| ADediting_620694 | chr17_41826474_- | intronic |
| ADediting_620695 | chr17_41826518_- | intronic |
| ADediting_620696 | chr17_41826559_- | intronic |
| ADediting_620697 | chr17_41826633_- | intronic |
| ADediting_620698 | chr17_41826661_- | intronic |
| ADediting_620699 | chr17_41826687_- | intronic |
| ADediting_620700 | chr17_41826692_- | intronic |
| ADediting_620701 | chr17_41826744_- | intronic |
| ADediting_620702 | chr17_41826756_- | intronic |
| ADediting_620703 | chr17_41826766_- | intronic |
| ADediting_620704 | chr17_41826784_- | intronic |
| ADediting_620705 | chr17_41826789_- | intronic |
| ADediting_620706 | chr17_41826818_- | intronic |
| ADediting_620707 | chr17_41826876_- | intronic |
| ADediting_620708 | chr17_41826878_- | intronic |
| ADediting_620709 | chr17_41826888_- | intronic |
| ADediting_620710 | chr17_41826900_- | intronic |
| ADediting_620711 | chr17_41826917_- | intronic |
| ADediting_620712 | chr17_41826918_- | intronic |
| ADediting_620713 | chr17_41826924_- | intronic |
| ADediting_620714 | chr17_41826931_- | intronic |
| ADediting_620715 | chr17_41826937_- | intronic |
| ADediting_620716 | chr17_41826974_- | intronic |
| ADediting_620717 | chr17_41827117_- | intronic |
| ADediting_620718 | chr17_41827198_- | intronic |
| ADediting_620719 | chr17_41828434_- | UTR3 |
| ADediting_620720 | chr17_41828474_- | UTR3 |
| ADediting_620721 | chr17_41828501_- | UTR3 |
| ADediting_620722 | chr17_41828502_- | UTR3 |
| ADediting_620723 | chr17_41828525_- | UTR3 |
| ADediting_620724 | chr17_41828540_- | UTR3 |
| ADediting_620725 | chr17_41828550_- | UTR3 |
| ADediting_620726 | chr17_41828564_- | UTR3 |
| ADediting_620727 | chr17_41829124_- | intronic |
| ADediting_620728 | chr17_41829150_- | intronic |
| ADediting_620729 | chr17_41830426_- | intronic |
| ADediting_620730 | chr17_41830447_- | intronic |
| ADediting_620731 | chr17_41830462_- | intronic |
| ADediting_620732 | chr17_41830483_- | intronic |
| ADediting_620733 | chr17_41832642_- | intronic |
| ADediting_620734 | chr17_41832650_- | intronic |
| ADediting_620735 | chr17_41832651_- | intronic |
| ADediting_620736 | chr17_41832656_- | intronic |
| ADediting_620737 | chr17_41832663_- | intronic |
| ADediting_620738 | chr17_41832702_- | intronic |
| ADediting_620739 | chr17_41832721_- | intronic |
| ADediting_620740 | chr17_41832744_- | intronic |
| ADediting_620741 | chr17_41832746_- | intronic |
| ADediting_620742 | chr17_41832784_- | intronic |
| ADediting_620743 | chr17_41832811_- | intronic |
| ADediting_620744 | chr17_41833422_- | intronic |
| ADediting_620745 | chr17_41833426_- | intronic |
| ADediting_620746 | chr17_41833445_- | intronic |
| ADediting_620747 | chr17_41833454_- | intronic |
| ADediting_620748 | chr17_41833455_- | intronic |
| ADediting_620749 | chr17_41833471_- | intronic |
| ADediting_620750 | chr17_41833481_- | intronic |
| ADediting_620751 | chr17_41833488_- | intronic |
| ADediting_620752 | chr17_41833491_- | intronic |
| ADediting_620753 | chr17_41833493_- | intronic |
| ADediting_620754 | chr17_41833494_- | intronic |
| ADediting_620755 | chr17_41833495_- | intronic |
| ADediting_620756 | chr17_41833496_- | intronic |
| ADediting_620757 | chr17_41833497_- | intronic |
| ADediting_620758 | chr17_41833511_- | intronic |
| ADediting_620759 | chr17_41833545_- | intronic |
| ADediting_620760 | chr17_41833550_- | intronic |
| ADediting_620761 | chr17_41833560_- | intronic |
| ADediting_620762 | chr17_41833591_- | intronic |
| ADediting_620763 | chr17_41833592_- | intronic |
| ADediting_620764 | chr17_41834133_- | intronic |
| ADediting_620765 | chr17_41834139_- | intronic |
| ADediting_620766 | chr17_41834151_- | intronic |
| ADediting_620767 | chr17_41834179_- | intronic |
| ADediting_620768 | chr17_41834185_- | intronic |
| ADediting_620769 | chr17_41834213_- | intronic |
| ADediting_620770 | chr17_41834223_- | intronic |
| ADediting_620771 | chr17_41834233_- | intronic |
| ADediting_620772 | chr17_41834248_- | intronic |
| ADediting_620773 | chr17_41834271_- | intronic |
| ADediting_620774 | chr17_41834274_- | intronic |
| ADediting_620775 | chr17_41834284_- | intronic |
| ADediting_620776 | chr17_41834296_- | intronic |
| ADediting_620777 | chr17_41834303_- | intronic |
| ADediting_620778 | chr17_41834309_- | intronic |
| ADediting_620779 | chr17_41834314_- | intronic |
| ADediting_620780 | chr17_41834335_- | intronic |
| ADediting_620781 | chr17_41834363_- | intronic |
| ADediting_620782 | chr17_41834380_- | intronic |
| ADediting_620783 | chr17_41834530_- | intronic |
| ADediting_620784 | chr17_41834667_- | intronic |
| ADediting_620785 | chr17_41834730_- | intronic |
| ADediting_1546419 | chr17_41826152_- | intronic |
| ADediting_1546420 | chr17_41826257_- | intronic |
| ADediting_1546421 | chr17_41826271_- | intronic |
| ADediting_1546422 | chr17_41826300_- | intronic |
| ADediting_1546423 | chr17_41826427_- | intronic |
| ADediting_1546424 | chr17_41826439_- | intronic |
| ADediting_1546425 | chr17_41826455_- | intronic |
| ADediting_1546426 | chr17_41826469_- | intronic |
| ADediting_1546427 | chr17_41826557_- | intronic |
| ADediting_1546428 | chr17_41826683_- | intronic |
| ADediting_1546429 | chr17_41826796_- | intronic |
| ADediting_1546430 | chr17_41826953_- | intronic |
| ADediting_1546431 | chr17_41826969_- | intronic |
| ADediting_1546432 | chr17_41827062_- | intronic |
| ADediting_1546433 | chr17_41827125_- | intronic |
| ADediting_1546434 | chr17_41827184_- | intronic |
| ADediting_1546435 | chr17_41827194_- | intronic |
| ADediting_1546436 | chr17_41828475_- | UTR3 |
| ADediting_1546437 | chr17_41828510_- | UTR3 |
| ADediting_1546438 | chr17_41828515_- | UTR3 |
| ADediting_1546439 | chr17_41828530_- | UTR3 |
| ADediting_1546440 | chr17_41828538_- | UTR3 |
| ADediting_1546441 | chr17_41828609_- | UTR3 |
| ADediting_1546442 | chr17_41832676_- | intronic |
| ADediting_1546443 | chr17_41832696_- | intronic |
| ADediting_1546444 | chr17_41833519_- | intronic |
| ADediting_1546445 | chr17_41833521_- | intronic |
| ADediting_1546446 | chr17_41833531_- | intronic |
| ADediting_1546447 | chr17_41833542_- | intronic |
| ADediting_1546448 | chr17_41833586_- | intronic |
| ADediting_1546449 | chr17_41834230_- | intronic |
| ADediting_1546450 | chr17_41834542_- | intronic |
| ADediting_1546451 | chr17_41834543_- | intronic |
| ADediting_1546452 | chr17_41834567_- | intronic |
| ADediting_1546453 | chr17_41834623_- | intronic |
| ADediting_1546454 | chr17_41834626_- | intronic |
| ADediting_1546455 | chr17_41834673_- | intronic |
| ADediting_1546456 | chr17_41834710_- | intronic |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_620654 | chr17_41825947_- | SINE | Alu | Name=AluJb |
| ADediting_620655 | chr17_41825961_- | SINE | Alu | Name=AluJb |
| ADediting_620656 | chr17_41825981_- | SINE | Alu | Name=AluJb |
| ADediting_620657 | chr17_41826031_- | SINE | Alu | Name=AluJb |
| ADediting_620658 | chr17_41826033_- | SINE | Alu | Name=AluJb |
| ADediting_620659 | chr17_41826043_- | SINE | Alu | Name=AluJb |
| ADediting_620660 | chr17_41826055_- | SINE | Alu | Name=AluJb |
| ADediting_620661 | chr17_41826073_- | SINE | Alu | Name=AluJb |
| ADediting_620662 | chr17_41826074_- | SINE | Alu | Name=AluJb |
| ADediting_620663 | chr17_41826088_- | SINE | Alu | Name=AluJb |
| ADediting_620664 | chr17_41826099_- | SINE | Alu | Name=AluJb |
| ADediting_620665 | chr17_41826117_- | SINE | Alu | Name=AluJb |
| ADediting_620666 | chr17_41826134_- | SINE | Alu | Name=AluJb |
| ADediting_620667 | chr17_41826150_- | SINE | Alu | Name=AluJb |
| ADediting_620668 | chr17_41826154_- | SINE | Alu | Name=AluJb |
| ADediting_620669 | chr17_41826246_- | SINE | Alu | Name=AluJb |
| ADediting_620670 | chr17_41826262_- | SINE | Alu | Name=AluJb |
| ADediting_620671 | chr17_41826266_- | SINE | Alu | Name=AluJb |
| ADediting_620672 | chr17_41826286_- | SINE | Alu | Name=AluJb |
| ADediting_620673 | chr17_41826291_- | SINE | Alu | Name=AluJb |
| ADediting_620674 | chr17_41826292_- | SINE | Alu | Name=AluJb |
| ADediting_620675 | chr17_41826306_- | SINE | Alu | Name=AluJb |
| ADediting_620676 | chr17_41826313_- | SINE | Alu | Name=AluJb |
| ADediting_620677 | chr17_41826316_- | SINE | Alu | Name=AluJb |
| ADediting_620678 | chr17_41826321_- | SINE | Alu | Name=AluJb |
| ADediting_620679 | chr17_41826331_- | SINE | Alu | Name=AluJb |
| ADediting_620680 | chr17_41826335_- | SINE | Alu | Name=AluJb |
| ADediting_620681 | chr17_41826339_- | SINE | Alu | Name=AluJb |
| ADediting_620682 | chr17_41826345_- | SINE | Alu | Name=AluJb |
| ADediting_620683 | chr17_41826348_- | SINE | Alu | Name=AluJb |
| ADediting_620684 | chr17_41826352_- | SINE | Alu | Name=AluJb |
| ADediting_620685 | chr17_41826362_- | SINE | Alu | Name=AluJb |
| ADediting_620686 | chr17_41826387_- | SINE | Alu | Name=AluJb |
| ADediting_620687 | chr17_41826422_- | SINE | Alu | Name=AluJb |
| ADediting_620688 | chr17_41826424_- | SINE | Alu | Name=AluJb |
| ADediting_620689 | chr17_41826436_- | SINE | Alu | Name=AluJb |
| ADediting_620690 | chr17_41826441_- | SINE | Alu | Name=AluJb |
| ADediting_620691 | chr17_41826442_- | SINE | Alu | Name=AluJb |
| ADediting_620692 | chr17_41826450_- | SINE | Alu | Name=AluJb |
| ADediting_620693 | chr17_41826460_- | SINE | Alu | Name=AluJb |
| ADediting_620694 | chr17_41826474_- | SINE | Alu | Name=AluJb |
| ADediting_620695 | chr17_41826518_- | SINE | Alu | Name=AluJb |
| ADediting_620696 | chr17_41826559_- | SINE | Alu | Name=Alu |
| ADediting_620697 | chr17_41826633_- | SINE | Alu | Name=AluSx3 |
| ADediting_620698 | chr17_41826661_- | SINE | Alu | Name=AluSx3 |
| ADediting_620699 | chr17_41826687_- | SINE | Alu | Name=AluSx3 |
| ADediting_620700 | chr17_41826692_- | SINE | Alu | Name=AluSx3 |
| ADediting_620701 | chr17_41826744_- | SINE | Alu | Name=AluSx |
| ADediting_620702 | chr17_41826756_- | SINE | Alu | Name=AluSx |
| ADediting_620703 | chr17_41826766_- | SINE | Alu | Name=AluSx |
| ADediting_620704 | chr17_41826784_- | SINE | Alu | Name=AluSx |
| ADediting_620705 | chr17_41826789_- | SINE | Alu | Name=AluSx |
| ADediting_620706 | chr17_41826818_- | SINE | Alu | Name=AluSx |
| ADediting_620707 | chr17_41826876_- | SINE | Alu | Name=AluSx |
| ADediting_620708 | chr17_41826878_- | SINE | Alu | Name=AluSx |
| ADediting_620709 | chr17_41826888_- | SINE | Alu | Name=AluSx |
| ADediting_620710 | chr17_41826900_- | SINE | Alu | Name=AluSx |
| ADediting_620711 | chr17_41826917_- | SINE | Alu | Name=AluSx |
| ADediting_620712 | chr17_41826918_- | SINE | Alu | Name=AluSx |
| ADediting_620713 | chr17_41826924_- | SINE | Alu | Name=AluSx |
| ADediting_620714 | chr17_41826931_- | SINE | Alu | Name=AluSx |
| ADediting_620715 | chr17_41826937_- | SINE | Alu | Name=AluSx |
| ADediting_620716 | chr17_41826974_- | SINE | Alu | Name=AluSx |
| ADediting_620717 | chr17_41827117_- | SINE | Alu | Name=AluY |
| ADediting_620718 | chr17_41827198_- | SINE | Alu | Name=AluY |
| ADediting_620719 | chr17_41828434_- | SINE | Alu | Name=AluSz |
| ADediting_620720 | chr17_41828474_- | SINE | Alu | Name=AluSz |
| ADediting_620721 | chr17_41828501_- | SINE | Alu | Name=AluSz |
| ADediting_620722 | chr17_41828502_- | SINE | Alu | Name=AluSz |
| ADediting_620723 | chr17_41828525_- | SINE | Alu | Name=AluSz |
| ADediting_620724 | chr17_41828540_- | SINE | Alu | Name=AluSz |
| ADediting_620725 | chr17_41828550_- | SINE | Alu | Name=AluSz |
| ADediting_620726 | chr17_41828564_- | SINE | Alu | Name=AluSz |
| ADediting_620727 | chr17_41829124_- | SINE | Alu | Name=AluJb |
| ADediting_620728 | chr17_41829150_- | SINE | Alu | Name=AluJb |
| ADediting_620729 | chr17_41830426_- | SINE | Alu | Name=AluSc |
| ADediting_620730 | chr17_41830447_- | SINE | Alu | Name=AluSc |
| ADediting_620731 | chr17_41830462_- | SINE | Alu | Name=AluSc |
| ADediting_620732 | chr17_41830483_- | SINE | Alu | Name=AluSc |
| ADediting_620733 | chr17_41832642_- | SINE | Alu | Name=AluSz6 |
| ADediting_620734 | chr17_41832650_- | SINE | Alu | Name=AluSz6 |
| ADediting_620735 | chr17_41832651_- | SINE | Alu | Name=AluSz6 |
| ADediting_620736 | chr17_41832656_- | SINE | Alu | Name=AluSz6 |
| ADediting_620737 | chr17_41832663_- | SINE | Alu | Name=AluSz6 |
| ADediting_620738 | chr17_41832702_- | SINE | Alu | Name=AluSz6 |
| ADediting_620739 | chr17_41832721_- | SINE | Alu | Name=AluSz6 |
| ADediting_620740 | chr17_41832744_- | SINE | Alu | Name=AluSz6 |
| ADediting_620741 | chr17_41832746_- | SINE | Alu | Name=AluSz6 |
| ADediting_620742 | chr17_41832784_- | SINE | Alu | Name=AluSz6 |
| ADediting_620743 | chr17_41832811_- | SINE | Alu | Name=AluSz6 |
| ADediting_620744 | chr17_41833422_- | SINE | Alu | Name=AluSz6 |
| ADediting_620745 | chr17_41833426_- | SINE | Alu | Name=AluSz6 |
| ADediting_620746 | chr17_41833445_- | SINE | Alu | Name=AluSz6 |
| ADediting_620747 | chr17_41833454_- | SINE | Alu | Name=AluSz6 |
| ADediting_620748 | chr17_41833455_- | SINE | Alu | Name=AluSz6 |
| ADediting_620749 | chr17_41833471_- | SINE | Alu | Name=AluSz6 |
| ADediting_620750 | chr17_41833481_- | SINE | Alu | Name=AluSz6 |
| ADediting_620751 | chr17_41833488_- | SINE | Alu | Name=AluSz6 |
| ADediting_620752 | chr17_41833491_- | SINE | Alu | Name=AluSz6 |
| ADediting_620753 | chr17_41833493_- | SINE | Alu | Name=AluSz6 |
| ADediting_620754 | chr17_41833494_- | SINE | Alu | Name=AluSz6 |
| ADediting_620755 | chr17_41833495_- | SINE | Alu | Name=AluSz6 |
| ADediting_620756 | chr17_41833496_- | SINE | Alu | Name=AluSz6 |
| ADediting_620757 | chr17_41833497_- | SINE | Alu | Name=AluSz6 |
| ADediting_620758 | chr17_41833511_- | SINE | Alu | Name=AluSz6 |
| ADediting_620759 | chr17_41833545_- | SINE | Alu | Name=AluSz6 |
| ADediting_620760 | chr17_41833550_- | SINE | Alu | Name=AluSz6 |
| ADediting_620761 | chr17_41833560_- | SINE | Alu | Name=AluSz6 |
| ADediting_620762 | chr17_41833591_- | SINE | Alu | Name=AluSz6 |
| ADediting_620763 | chr17_41833592_- | SINE | Alu | Name=AluSz6 |
| ADediting_620764 | chr17_41834133_- | SINE | Alu | Name=AluSx |
| ADediting_620765 | chr17_41834139_- | SINE | Alu | Name=AluSx |
| ADediting_620766 | chr17_41834151_- | SINE | Alu | Name=AluSx |
| ADediting_620767 | chr17_41834179_- | SINE | Alu | Name=AluSx |
| ADediting_620768 | chr17_41834185_- | SINE | Alu | Name=AluSx |
| ADediting_620769 | chr17_41834213_- | SINE | Alu | Name=AluSx |
| ADediting_620770 | chr17_41834223_- | SINE | Alu | Name=AluSx |
| ADediting_620771 | chr17_41834233_- | SINE | Alu | Name=AluSx |
| ADediting_620772 | chr17_41834248_- | SINE | Alu | Name=AluSx |
| ADediting_620773 | chr17_41834271_- | SINE | Alu | Name=AluSx |
| ADediting_620774 | chr17_41834274_- | SINE | Alu | Name=AluSx |
| ADediting_620775 | chr17_41834284_- | SINE | Alu | Name=AluSx |
| ADediting_620776 | chr17_41834296_- | SINE | Alu | Name=AluSx |
| ADediting_620777 | chr17_41834303_- | SINE | Alu | Name=AluSx |
| ADediting_620778 | chr17_41834309_- | SINE | Alu | Name=AluSx |
| ADediting_620779 | chr17_41834314_- | SINE | Alu | Name=AluSx |
| ADediting_620780 | chr17_41834335_- | SINE | Alu | Name=AluSx |
| ADediting_620781 | chr17_41834363_- | SINE | Alu | Name=AluSx |
| ADediting_620782 | chr17_41834380_- | SINE | Alu | Name=AluSx |
| ADediting_620783 | chr17_41834530_- | SINE | Alu | Name=AluJo |
| ADediting_620784 | chr17_41834667_- | SINE | Alu | Name=AluJo |
| ADediting_620785 | chr17_41834730_- | SINE | Alu | Name=AluJo |
| ADediting_1546419 | chr17_41826152_- | SINE | Alu | Name=AluJb |
| ADediting_1546420 | chr17_41826257_- | SINE | Alu | Name=AluJb |
| ADediting_1546421 | chr17_41826271_- | SINE | Alu | Name=AluJb |
| ADediting_1546422 | chr17_41826300_- | SINE | Alu | Name=AluJb |
| ADediting_1546423 | chr17_41826427_- | SINE | Alu | Name=AluJb |
| ADediting_1546424 | chr17_41826439_- | SINE | Alu | Name=AluJb |
| ADediting_1546425 | chr17_41826455_- | SINE | Alu | Name=AluJb |
| ADediting_1546426 | chr17_41826469_- | SINE | Alu | Name=AluJb |
| ADediting_1546427 | chr17_41826557_- | SINE | Alu | Name=Alu |
| ADediting_1546428 | chr17_41826683_- | SINE | Alu | Name=AluSx3 |
| ADediting_1546429 | chr17_41826796_- | SINE | Alu | Name=AluSx |
| ADediting_1546430 | chr17_41826953_- | SINE | Alu | Name=AluSx |
| ADediting_1546431 | chr17_41826969_- | SINE | Alu | Name=AluSx |
| ADediting_1546432 | chr17_41827062_- | SINE | Alu | Name=AluY |
| ADediting_1546433 | chr17_41827125_- | SINE | Alu | Name=AluY |
| ADediting_1546434 | chr17_41827184_- | SINE | Alu | Name=AluY |
| ADediting_1546435 | chr17_41827194_- | SINE | Alu | Name=AluY |
| ADediting_1546436 | chr17_41828475_- | SINE | Alu | Name=AluSz |
| ADediting_1546437 | chr17_41828510_- | SINE | Alu | Name=AluSz |
| ADediting_1546438 | chr17_41828515_- | SINE | Alu | Name=AluSz |
| ADediting_1546439 | chr17_41828530_- | SINE | Alu | Name=AluSz |
| ADediting_1546440 | chr17_41828538_- | SINE | Alu | Name=AluSz |
| ADediting_1546441 | chr17_41828609_- | SINE | Alu | Name=AluSz |
| ADediting_1546442 | chr17_41832676_- | SINE | Alu | Name=AluSz6 |
| ADediting_1546443 | chr17_41832696_- | SINE | Alu | Name=AluSz6 |
| ADediting_1546444 | chr17_41833519_- | SINE | Alu | Name=AluSz6 |
| ADediting_1546445 | chr17_41833521_- | SINE | Alu | Name=AluSz6 |
| ADediting_1546446 | chr17_41833531_- | SINE | Alu | Name=AluSz6 |
| ADediting_1546447 | chr17_41833542_- | SINE | Alu | Name=AluSz6 |
| ADediting_1546448 | chr17_41833586_- | SINE | Alu | Name=AluSz6 |
| ADediting_1546449 | chr17_41834230_- | SINE | Alu | Name=AluSx |
| ADediting_1546450 | chr17_41834542_- | SINE | Alu | Name=AluJo |
| ADediting_1546451 | chr17_41834543_- | SINE | Alu | Name=AluJo |
| ADediting_1546452 | chr17_41834567_- | SINE | Alu | Name=AluJo |
| ADediting_1546453 | chr17_41834623_- | SINE | Alu | Name=AluJo |
| ADediting_1546454 | chr17_41834626_- | SINE | Alu | Name=AluJo |
| ADediting_1546455 | chr17_41834673_- | SINE | Alu | Name=AluJo |
| ADediting_1546456 | chr17_41834710_- | SINE | Alu | Name=AluJo |
Top |
RNA A-to-I editing events in the alternative splicing sites for NT5C3B |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| ES | ADediting_620738 | chr17_41832702_- | 41832698:41832720 | 3ss | 2i | ATTTTTGTATTTTTTAGTAGAGA | 4.23 | ATTTTTGTATTTTTTAGTGGAGA | -3.73 |
| ES | ADediting_620738 | chr17_41832702_- | 41832701:41832723 | 3ss | 2e | CTAATTTTTGTATTTTTTAGTAG | 6.74 | CTAATTTTTGTATTTTTTAGTGG | 8.07 |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
Top |
Differntial gene expression between RNA A-to-I edited versus non-edited samples for NT5C3B |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
Top |
Protein coding region RNA A-to-I editings for NT5C3B |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
Top |
The effects of the RNA editing to the miRNA binding sites for NT5C3B |
| RNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. |
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| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1546436 | chr17_41828475_- | ENSG00000141698.17 | ENST00000486304.2 | NT5C3B-211 | hsa-miR-638 | chr17 | 41828469 | 41828475 | 7mer-1a | 41828469 | 41828493 | 143 | -25.78 |
| ADediting_1546437 | chr17_41828510_- | ENSG00000141698.17 | ENST00000486304.2 | NT5C3B-211 | hsa-miR-153-5p | chr17 | 41828510 | 41828516 | 7mer-m8 | 41828509 | 41828531 | 150 | -9.04 |
| ADediting_1546437 | chr17_41828510_- | ENSG00000141698.17 | ENST00000486304.2 | NT5C3B-211 | hsa-miR-20a-3p | chr17 | 41828506 | 41828513 | 8mer-1a | 41828506 | 41828527 | 156 | -10.59 |
| ADediting_1546439 | chr17_41828530_- | ENSG00000141698.17 | ENST00000486304.2 | NT5C3B-211 | hsa-miR-412-3p | chr17 | 41828530 | 41828536 | 7mer-m8 | 41828529 | 41828551 | 153 | -17.22 |
| ADediting_1546439 | chr17_41828530_- | ENSG00000141698.17 | ENST00000486304.2 | NT5C3B-211 | hsa-miR-4535 | chr17 | 41828525 | 41828531 | 7mer-m8 | 41828524 | 41828540 | 140 | -16.43 |
| ADediting_1546439 | chr17_41828530_- | ENSG00000141698.17 | ENST00000486304.2 | NT5C3B-211 | hsa-miR-659-5p | chr17 | 41828525 | 41828532 | 8mer-1a | 41828525 | 41828546 | 149 | -20.31 |
| ADediting_1546439 | chr17_41828530_- | ENSG00000141698.17 | ENST00000486304.2 | NT5C3B-211 | hsa-miR-6754-3p | chr17 | 41828530 | 41828536 | 7mer-m8 | 41828529 | 41828549 | 144 | -17.54 |
| ADediting_1546440 | chr17_41828538_- | ENSG00000141698.17 | ENST00000486304.2 | NT5C3B-211 | hsa-miR-1306-3p | chr17 | 41828538 | 41828544 | 7mer-m8 | 41828537 | 41828554 | 152 | -23.71 |
| ADediting_1546441 | chr17_41828609_- | ENSG00000141698.17 | ENST00000486304.2 | NT5C3B-211 | hsa-miR-3117-3p | chr17 | 41828604 | 41828610 | 7mer-m8 | 41828603 | 41828625 | 145 | -16.26 |
| ADediting_1546441 | chr17_41828609_- | ENSG00000141698.17 | ENST00000486304.2 | NT5C3B-211 | hsa-miR-4759 | chr17 | 41828604 | 41828611 | 8mer-1a | 41828604 | 41828624 | 157 | -16.47 |
| ADediting_620719 | chr17_41828434_- | ENSG00000141698.17 | ENST00000486304.2 | NT5C3B-211 | hsa-miR-10400-3p | chr17 | 41828430 | 41828436 | 7mer-m8 | 41828429 | 41828450 | 141 | -25.07 |
| ADediting_620719 | chr17_41828434_- | ENSG00000141698.17 | ENST00000486304.2 | NT5C3B-211 | hsa-miR-24-3p | chr17 | 41828432 | 41828438 | 7mer-m8 | 41828431 | 41828452 | 140 | -16.28 |
| ADediting_620719 | chr17_41828434_- | ENSG00000141698.17 | ENST00000486304.2 | NT5C3B-211 | hsa-miR-3934-3p | chr17 | 41828433 | 41828439 | 7mer-m8 | 41828432 | 41828453 | 147 | -16.81 |
| ADediting_620719 | chr17_41828434_- | ENSG00000141698.17 | ENST00000486304.2 | NT5C3B-211 | hsa-miR-4437 | chr17 | 41828430 | 41828437 | 8mer-1a | 41828430 | 41828450 | 150 | -22.53 |
| ADediting_620719 | chr17_41828434_- | ENSG00000141698.17 | ENST00000486304.2 | NT5C3B-211 | hsa-miR-4674 | chr17 | 41828430 | 41828436 | 7mer-m8 | 41828429 | 41828449 | 151 | -26.21 |
| ADediting_620721 | chr17_41828501_- | ENSG00000141698.17 | ENST00000486304.2 | NT5C3B-211 | hsa-miR-138-2-3p | chr17 | 41828501 | 41828507 | 7mer-m8 | 41828500 | 41828521 | 140 | -7.14 |
| ADediting_620724 | chr17_41828540_- | ENSG00000141698.17 | ENST00000486304.2 | NT5C3B-211 | hsa-miR-3190-5p | chr17 | 41828540 | 41828546 | 7mer-m8 | 41828539 | 41828558 | 154 | -19.64 |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1546436 | chr17_41828475_- | ENSG00000141698.17 | ENST00000486304.2 | NT5C3B-211 | hsa-miR-10399-5p | chr17 | 41828473 | 41828479 | 7mer-m8 | 41828472 | 41828492 | 140 | -9 |
| ADediting_1546437 | chr17_41828510_- | ENSG00000141698.17 | ENST00000486304.2 | NT5C3B-211 | hsa-miR-4742-3p | chr17 | 41828506 | 41828513 | 8mer-1a | 41828506 | 41828528 | 142 | -13.29 |
| ADediting_1546440 | chr17_41828538_- | ENSG00000141698.17 | ENST00000486304.2 | NT5C3B-211 | hsa-miR-4716-5p | chr17 | 41828535 | 41828541 | 7mer-m8 | 41828534 | 41828555 | 140 | -11.3 |
| ADediting_1546440 | chr17_41828538_- | ENSG00000141698.17 | ENST00000486304.2 | NT5C3B-211 | hsa-miR-4781-3p | chr17 | 41828537 | 41828543 | 7mer-m8 | 41828536 | 41828554 | 144 | -13.86 |
| ADediting_1546441 | chr17_41828609_- | ENSG00000141698.17 | ENST00000486304.2 | NT5C3B-211 | hsa-miR-10399-5p | chr17 | 41828608 | 41828614 | 7mer-m8 | 41828607 | 41828624 | 150 | -13.23 |
| ADediting_1546441 | chr17_41828609_- | ENSG00000141698.17 | ENST00000486304.2 | NT5C3B-211 | hsa-miR-6504-3p | chr17 | 41828608 | 41828614 | 7mer-m8 | 41828607 | 41828628 | 153 | -14.35 |
| ADediting_620720 | chr17_41828474_- | ENSG00000141698.17 | ENST00000486304.2 | NT5C3B-211 | hsa-miR-10399-5p | chr17 | 41828473 | 41828479 | 7mer-m8 | 41828472 | 41828492 | 140 | -9 |
| ADediting_620720 | chr17_41828474_- | ENSG00000141698.17 | ENST00000486304.2 | NT5C3B-211 | hsa-miR-5089-5p | chr17 | 41828469 | 41828475 | 7mer-m8 | 41828468 | 41828486 | 148 | -13.06 |
| ADediting_620723 | chr17_41828525_- | ENSG00000141698.17 | ENST00000486304.2 | NT5C3B-211 | hsa-miR-5683 | chr17 | 41828519 | 41828526 | 8mer-1a | 41828519 | 41828542 | 155 | -14.06 |
| ADediting_620724 | chr17_41828540_- | ENSG00000141698.17 | ENST00000486304.2 | NT5C3B-211 | hsa-miR-4716-5p | chr17 | 41828535 | 41828541 | 7mer-m8 | 41828534 | 41828555 | 140 | -11.3 |
| ADediting_620724 | chr17_41828540_- | ENSG00000141698.17 | ENST00000486304.2 | NT5C3B-211 | hsa-miR-4781-3p | chr17 | 41828537 | 41828543 | 7mer-m8 | 41828536 | 41828554 | 144 | -13.86 |
| ADediting_620725 | chr17_41828550_- | ENSG00000141698.17 | ENST00000486304.2 | NT5C3B-211 | hsa-miR-3663-5p | chr17 | 41828549 | 41828555 | 7mer-m8 | 41828548 | 41828567 | 148 | -21.98 |
| ADediting_620725 | chr17_41828550_- | ENSG00000141698.17 | ENST00000486304.2 | NT5C3B-211 | hsa-miR-6131 | chr17 | 41828548 | 41828554 | 7mer-m8 | 41828547 | 41828565 | 140 | -18.33 |
| ADediting_620725 | chr17_41828550_- | ENSG00000141698.17 | ENST00000486304.2 | NT5C3B-211 | hsa-miR-6843-3p | chr17 | 41828550 | 41828556 | 7mer-m8 | 41828549 | 41828568 | 152 | -19.47 |
| ADediting_620725 | chr17_41828550_- | ENSG00000141698.17 | ENST00000486304.2 | NT5C3B-211 | hsa-miR-6848-3p | chr17 | 41828550 | 41828556 | 7mer-m8 | 41828549 | 41828566 | 142 | -14.3 |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1337757 | chr7_5495852_- | ENSG00000141698.17 | ENST00000435506.7 | NT5C3B-203 | hsa-miR-589-3p | chr17 | 41825171 | 41825178 | 8mer-1a | 41825171 | 41825194 | 140 | -14.06 |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| Differentially expressed gene-miRNA network |
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The effects of the RNA editing to the stability of the RNA structures for NT5C3B |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| ENST00000486304.2 | protein_coding |  |  |
| RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| ADediting_620719 | ENST00000486304.2 | chr17_41828434_- | 599 | -245.00 | -238.30 | -255.60 |
| ADediting_620720 | ENST00000486304.2 | chr17_41828474_- | 559 | -238.30 | -238.30 | -255.60 |
| ADediting_1546436 | ENST00000486304.2 | chr17_41828475_- | 558 | -240.20 | -238.30 | -255.60 |
| ADediting_620721 | ENST00000486304.2 | chr17_41828501_- | 532 | -240.30 | -238.30 | -255.60 |
| ADediting_620722 | ENST00000486304.2 | chr17_41828502_- | 531 | -238.30 | -238.30 | -255.60 |
| ADediting_1546437 | ENST00000486304.2 | chr17_41828510_- | 523 | -240.30 | -238.30 | -255.60 |
| ADediting_1546438 | ENST00000486304.2 | chr17_41828515_- | 518 | -238.30 | -238.30 | -255.60 |
| ADediting_620723 | ENST00000486304.2 | chr17_41828525_- | 508 | -240.40 | -238.30 | -255.60 |
| ADediting_1546439 | ENST00000486304.2 | chr17_41828530_- | 503 | -240.40 | -238.30 | -255.60 |
| ADediting_1546440 | ENST00000486304.2 | chr17_41828538_- | 495 | -239.40 | -238.30 | -255.60 |
| ADediting_620724 | ENST00000486304.2 | chr17_41828540_- | 493 | -240.10 | -238.30 | -255.60 |
| ADediting_620725 | ENST00000486304.2 | chr17_41828550_- | 483 | -241.30 | -238.30 | -255.60 |
| ADediting_620726 | ENST00000486304.2 | chr17_41828564_- | 469 | -238.30 | -238.30 | -255.60 |
| ADediting_1546441 | ENST00000486304.2 | chr17_41828609_- | 424 | -238.60 | -238.30 | -255.60 |
| RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for NT5C3B |
| Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | ADediting_620669 | chr17_41826246_- | 0.403876003440544 | 0.0475741854127524 | 0.486929191509894 | -0.039629356790868 | 5.21410319396808e-09 | 0.324018250286266 |
| DLPFC | ADediting_620673 | chr17_41826291_- | 0.967296401141151 | 0.0023380495037119 | 0.0842790758418769 | -0.0982113724991499 | 2.46287808843204e-08 | 0.310100421529808 |
| DLPFC | ADediting_620674 | chr17_41826292_- | 0.651591344356099 | -0.0257462192440343 | 0.0388785899872059 | -0.117379154731126 | 8.63061207619218e-09 | 0.319578186292066 |
| DLPFC | ADediting_620677 | chr17_41826316_- | 0.614439201464649 | -0.0287210277940259 | 0.126912591228276 | -0.0868801420595779 | 2.38008874651548e-10 | 0.349765046867245 |
| DLPFC | ADediting_620678 | chr17_41826321_- | 0.819222351056376 | -0.0130325974667775 | 0.169535298699087 | -0.0782172341172917 | 1.06155664192575e-10 | 0.356128600163478 |
| DLPFC | ADediting_620691 | chr17_41826442_- | 0.144273387072916 | 0.0831180994037241 | 0.822488308015135 | 0.0127931400458959 | 2.14816372437479e-11 | 0.368319451518254 |
| DLPFC | ADediting_620692 | chr17_41826450_- | 0.106793784199193 | 0.0917767073157737 | 0.32129077565691 | 0.0565142294458462 | 1.85100566100455e-08 | 0.312714915901828 |
| DLPFC | ADediting_620698 | chr17_41826661_- | 0.0224069145900777 | 0.129664172161052 | 0.439759233672177 | 0.0440373309687991 | 1.18106284780135e-11 | 0.372754745369662 |
| DLPFC | ADediting_620704 | chr17_41826784_- | 3.82453490557719e-05 | 0.231624561104216 | 0.00804695970564798 | 0.150266657657627 | 7.11660334970177e-13 | 0.392728149051481 |
| DLPFC | ADediting_620709 | chr17_41826888_- | 0.0647339119838275 | 0.105041681574642 | 0.549613721559808 | 0.034111284625703 | 2.40943561947567e-11 | 0.36746062566132 |
| DLPFC | ADediting_620715 | chr17_41826937_- | 0.00137657137863903 | 0.180949090866644 | 0.0339282324551082 | 0.120507867181728 | 3.64198676888437e-10 | 0.346354150000735 |
| DLPFC | ADediting_620743 | chr17_41832811_- | 0.00385967383295243 | 0.163660616260485 | 0.122284500989517 | 0.087949755837102 | 2.91877835536437e-15 | 0.428306039648059 |
| DLPFC | ADediting_620762 | chr17_41833591_- | 3.88254955723643e-06 | 0.258823646665359 | 0.00490726114712813 | 0.159392252981117 | 2.89695596859912e-11 | 0.366076505905832 |
| Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 6.30885740868524e-42 | 0.671094468877791 | 3.63659683221226e-59 | 0.758235908664531 | 3.61180364359465e-11 | 0.364411123395298 |
| AC | 2.18444567588098e-68 | 0.841898415003201 | 1.19665445001295e-66 | 0.836214183450534 | 1.93757518470464e-10 | 0.388642938966762 |
| PCC | 5.43526460326256e-32 | 0.721474242245618 | 1.28800281871704e-38 | 0.769240766083157 | 0.0203623663564348 | 0.167750610396608 |
| CER | 1.5224631201874e-09 | 0.46822057493497 | 2.32133476064625e-07 | 0.407216843189824 | 0.711272890405577 | 0.030470262278329 |
| TCX | 1.45382945774222e-19 | 0.652612406977878 | 8.75931284925406e-33 | 0.78649854148757 | 0.00572094393973397 | -0.224615976878921 |
| FP | 5.17012970218908e-17 | 0.574389402027757 | 1.38851519964825e-20 | 0.623811907160967 | 0.44322683266436 | -0.0578300725127324 |
| IFG | 0.000361873913225399 | 0.656812116656549 | 0.000519124524076593 | 0.643550923810123 | 0.292941272336845 | -0.218982830968796 |
| PG | 1.58061244052232e-49 | 0.834594099915577 | 1.36340557512867e-35 | 0.755222764879401 | 0.0909283489566542 | -0.124311753015347 |
| STG | 1.01911077275474e-18 | 0.784789980000341 | 6.44203501578648e-13 | 0.685314560006724 | 0.544494707655859 | -0.0670535512412084 |
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Relation with AD stages for NT5C3B |
| Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
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RelatedDrugs for NT5C3B |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for NT5C3B |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
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