ADeditome: functional annotation of RNA A-to-I editing in AD

Gene summary for SMYD4

Gene summary

Gene information	Gene symbol	SMYD4
	Gene ID	114826
	Gene name	SET and MYND domain containing 4
	Synonyms	ZMYND21
	Cytomap	17p13.3
	Type of gene	protein-coding
	Description	SET and MYND domain-containing protein 4
	Modification date	20200313
	UniProtAcc	Q8IYR2,
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for SMYD4

RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure.
* This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage).

RNA editing frequencies across three data sets.

The number of RNA A-to-I editing events in different types of transcripts (# event, percentage).

RNA A-to-I editing events in AD.

ADediting_590266(1779971, -), ADediting_590267(1780248, -), ADediting_590270(1780270, -), ADediting_590271(1780278, -), ADediting_590274(1780285, -), ADediting_590275(1780286, -), ADediting_590277(1780290, -), ADediting_590279(1780294, -), ADediting_590283(1780307, -), ADediting_590284(1780315, -), ADediting_590285(1780320, -), ADediting_590286(1780326, -), ADediting_590287(1780330, -), ADediting_590288(1780335, -), ADediting_590289(1780353, -), ADediting_590290(1780363, -), ADediting_590292(1780371, -), ADediting_590293(1780416, -), ADediting_590294(1780433, -), ADediting_590295(1780434, -), ADediting_590296(1780435, -), ADediting_590297(1780436, -), ADediting_590298(1780444, -), ADediting_590299(1780454, -), ADediting_590300(1780475, -), ADediting_590301(1780496, -), ADediting_590302(1780506, -), ADediting_590303(1780674, -), ADediting_590304(1780694, -), ADediting_590305(1780698, -), ADediting_590306(1780707, -), ADediting_590307(1780718, -), ADediting_590308(1780733, -), ADediting_590309(1780743, -), ADediting_590310(1780750, -), ADediting_590311(1780754, -), ADediting_590312(1780756, -), ADediting_590313(1780760, -), ADediting_590314(1780786, -), ADediting_590315(1780790, -), ADediting_590316(1780797, -), ADediting_590317(1780817, -), ADediting_590318(1780818, -), ADediting_590319(1780819, -), ADediting_590320(1780825, -), ADediting_590321(1780827, -), ADediting_590322(1780851, -), ADediting_590323(1780868, -), ADediting_590324(1780894, -), ADediting_590325(1780895, -), ADediting_590326(1780902, -), ADediting_590327(1780903, -), ADediting_590328(1780962, -), ADediting_590329(1780972, -), ADediting_590330(1780985, -), ADediting_590331(1780992, -), ADediting_590332(1780996, -), ADediting_590333(1781012, -), ADediting_590334(1781016, -), ADediting_590335(1781025, -), ADediting_590336(1781031, -), ADediting_590337(1781048, -), ADediting_590338(1781052, -), ADediting_590339(1781057, -), ADediting_590340(1781058, -), ADediting_590341(1781064, -), ADediting_590342(1781080, -), ADediting_590343(1781084, -), ADediting_590344(1781094, -), ADediting_590345(1781096, -), ADediting_590346(1781097, -), ADediting_590347(1781098, -), ADediting_590348(1781103, -), ADediting_590349(1781109, -), ADediting_590350(1781114, -), ADediting_590351(1781115, -), ADediting_590352(1781116, -), ADediting_590353(1781122, -), ADediting_590354(1781124, -), ADediting_590355(1781125, -), ADediting_590356(1781134, -), ADediting_590357(1781137, -), ADediting_590358(1781139, -), ADediting_590359(1781140, -), ADediting_590360(1781148, -), ADediting_590361(1781158, -), ADediting_590362(1781171, -), ADediting_590363(1781172, -), ADediting_590364(1781193, -), ADediting_590365(1781194, -), ADediting_590366(1781202, -), ADediting_590367(1781212, -), ADediting_590368(1781216, -), ADediting_590370(1781764, -), ADediting_590371(1781765, -), ADediting_590372(1781792, -), ADediting_590373(1781804, -), ADediting_590374(1781818, -), ADediting_590376(1782427, -), ADediting_590377(1782443, -), ADediting_590392(1782834, -), ADediting_590393(1782835, -), ADediting_590566(1785684, -), ADediting_590616(1788645, -), ADediting_590624(1790579, -), ADediting_590625(1790628, -), ADediting_590627(1790641, -), ADediting_590628(1790654, -), ADediting_590629(1790655, -), ADediting_590630(1790694, -), ADediting_590631(1790699, -), ADediting_590632(1790720, -), ADediting_590633(1790721, -), ADediting_590640(1790962, -), ADediting_590643(1791005, -), ADediting_590644(1791015, -), ADediting_590645(1791064, -), ADediting_590734(1792135, -), ADediting_590735(1792268, -), ADediting_590736(1792298, -), ADediting_590741(1792454, -), ADediting_590743(1792589, -), ADediting_590744(1792635, -), ADediting_590886(1795559, -), ADediting_590967(1796513, -), ADediting_590985(1796601, -), ADediting_590993(1796619, -), ADediting_590994(1796656, -), ADediting_590995(1796663, -), ADediting_590996(1796707, -), ADediting_590997(1796710, -), ADediting_590998(1796714, -), ADediting_591069(1797810, -), ADediting_591070(1797836, -), ADediting_591071(1797889, -), ADediting_591072(1797890, -), ADediting_591073(1797919, -), ADediting_591074(1797926, -), ADediting_591075(1797958, -), ADediting_591076(1798223, -), ADediting_591077(1798233, -), ADediting_591078(1798259, -), ADediting_591079(1798815, -), ADediting_591080(1798830, -), ADediting_591081(1798847, -), ADediting_591082(1799616, -), ADediting_591083(1799649, -), ADediting_591085(1801732, -), ADediting_591163(1805182, -), ADediting_591164(1805199, -), ADediting_591165(1805296, -), ADediting_591166(1805306, -), ADediting_591167(1805309, -), ADediting_591168(1805310, -), ADediting_591169(1805342, -), ADediting_591174(1805624, -), ADediting_591175(1805730, -), ADediting_591177(1805760, -), ADediting_591178(1805798, -), ADediting_591195(1806053, -), ADediting_591197(1806063, -), ADediting_591206(1806099, -), ADediting_591207(1806130, -), ADediting_591208(1806131, -), ADediting_591224(1807028, -), ADediting_591225(1807029, -), ADediting_591226(1807109, -), ADediting_591227(1807609, -), ADediting_591283(1809650, -), ADediting_591285(1811724, -), ADediting_591286(1811761, -), ADediting_591287(1811832, -), ADediting_591288(1811875, -), ADediting_591289(1811891, -), ADediting_591290(1814699, -), ADediting_591291(1814702, -), ADediting_591292(1814747, -), ADediting_591293(1814771, -), ADediting_591294(1816537, -), ADediting_591295(1817175, -), ADediting_591296(1817843, -), ADediting_591297(1817858, -), ADediting_591298(1817925, -), ADediting_591299(1817935, -), ADediting_591333(1819177, -), ADediting_591337(1819235, -), ADediting_591338(1819279, -), ADediting_591358(1819311, -), ADediting_591359(1819313, -), ADediting_591383(1820034, -), ADediting_591384(1820043, -), ADediting_591406(1823136, -), ADediting_591407(1824090, -), ADediting_591408(1824151, -), ADediting_1545467(1780343, -), ADediting_1545473(1780687, -), ADediting_1545474(1780828, -), ADediting_1545475(1781017, -), ADediting_1545476(1781091, -), ADediting_1545477(1781185, -), ADediting_1626050(1793932, -), ADediting_1626058(1805690, -), ADediting_1626060(1807106, -),

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RNA editing positional annotations for SMYD4 using Annovar

Protein coding RNA editing(s).

ADeditome ID	Position	Variant type	ENST	NTchange	AAchange	SIFT_score	Polyphen2_HVAR_score	PROVEAN_pred
ADediting_591292	chr17_1814747_-	synonymous SNV	ENST00000576633.1	c.A183G	p.P61P	.	.	.
ADediting_591293	chr17_1814771_-	synonymous SNV	ENST00000576633.1	c.A159G	p.S53S	.	.	.

Gene structure information of RNA editing(s).

ADeditome ID	Position	Variant type
ADediting_590266	chr17_1779971_-	UTR3
ADediting_590267	chr17_1780248_-	UTR3
ADediting_590270	chr17_1780270_-	UTR3
ADediting_590271	chr17_1780278_-	UTR3
ADediting_590274	chr17_1780285_-	UTR3
ADediting_590275	chr17_1780286_-	UTR3
ADediting_590277	chr17_1780290_-	UTR3
ADediting_590279	chr17_1780294_-	UTR3
ADediting_590283	chr17_1780307_-	UTR3
ADediting_590284	chr17_1780315_-	UTR3
ADediting_590285	chr17_1780320_-	UTR3
ADediting_590286	chr17_1780326_-	UTR3
ADediting_590287	chr17_1780330_-	UTR3
ADediting_590288	chr17_1780335_-	UTR3
ADediting_590289	chr17_1780353_-	UTR3
ADediting_590290	chr17_1780363_-	UTR3
ADediting_590292	chr17_1780371_-	UTR3
ADediting_590293	chr17_1780416_-	UTR3
ADediting_590294	chr17_1780433_-	UTR3
ADediting_590295	chr17_1780434_-	UTR3
ADediting_590296	chr17_1780435_-	UTR3
ADediting_590297	chr17_1780436_-	UTR3
ADediting_590298	chr17_1780444_-	UTR3
ADediting_590299	chr17_1780454_-	UTR3
ADediting_590300	chr17_1780475_-	UTR3
ADediting_590301	chr17_1780496_-	UTR3
ADediting_590302	chr17_1780506_-	UTR3
ADediting_590303	chr17_1780674_-	UTR3
ADediting_590304	chr17_1780694_-	UTR3
ADediting_590305	chr17_1780698_-	UTR3
ADediting_590306	chr17_1780707_-	UTR3
ADediting_590307	chr17_1780718_-	UTR3
ADediting_590308	chr17_1780733_-	UTR3
ADediting_590309	chr17_1780743_-	UTR3
ADediting_590310	chr17_1780750_-	UTR3
ADediting_590311	chr17_1780754_-	UTR3
ADediting_590312	chr17_1780756_-	UTR3
ADediting_590313	chr17_1780760_-	UTR3
ADediting_590314	chr17_1780786_-	UTR3
ADediting_590315	chr17_1780790_-	UTR3
ADediting_590316	chr17_1780797_-	UTR3
ADediting_590317	chr17_1780817_-	UTR3
ADediting_590318	chr17_1780818_-	UTR3
ADediting_590319	chr17_1780819_-	UTR3
ADediting_590320	chr17_1780825_-	UTR3
ADediting_590321	chr17_1780827_-	UTR3
ADediting_590322	chr17_1780851_-	UTR3
ADediting_590323	chr17_1780868_-	UTR3
ADediting_590324	chr17_1780894_-	UTR3
ADediting_590325	chr17_1780895_-	UTR3
ADediting_590326	chr17_1780902_-	UTR3
ADediting_590327	chr17_1780903_-	UTR3
ADediting_590328	chr17_1780962_-	UTR3
ADediting_590329	chr17_1780972_-	UTR3
ADediting_590330	chr17_1780985_-	UTR3
ADediting_590331	chr17_1780992_-	UTR3
ADediting_590332	chr17_1780996_-	UTR3
ADediting_590333	chr17_1781012_-	UTR3
ADediting_590334	chr17_1781016_-	UTR3
ADediting_590335	chr17_1781025_-	UTR3
ADediting_590336	chr17_1781031_-	UTR3
ADediting_590337	chr17_1781048_-	UTR3
ADediting_590338	chr17_1781052_-	UTR3
ADediting_590339	chr17_1781057_-	UTR3
ADediting_590340	chr17_1781058_-	UTR3
ADediting_590341	chr17_1781064_-	UTR3
ADediting_590342	chr17_1781080_-	UTR3
ADediting_590343	chr17_1781084_-	UTR3
ADediting_590344	chr17_1781094_-	UTR3
ADediting_590345	chr17_1781096_-	UTR3
ADediting_590346	chr17_1781097_-	UTR3
ADediting_590347	chr17_1781098_-	UTR3
ADediting_590348	chr17_1781103_-	UTR3
ADediting_590349	chr17_1781109_-	UTR3
ADediting_590350	chr17_1781114_-	UTR3
ADediting_590351	chr17_1781115_-	UTR3
ADediting_590352	chr17_1781116_-	UTR3
ADediting_590353	chr17_1781122_-	UTR3
ADediting_590354	chr17_1781124_-	UTR3
ADediting_590355	chr17_1781125_-	UTR3
ADediting_590356	chr17_1781134_-	UTR3
ADediting_590357	chr17_1781137_-	UTR3
ADediting_590358	chr17_1781139_-	UTR3
ADediting_590359	chr17_1781140_-	UTR3
ADediting_590360	chr17_1781148_-	UTR3
ADediting_590361	chr17_1781158_-	UTR3
ADediting_590362	chr17_1781171_-	UTR3
ADediting_590363	chr17_1781172_-	UTR3
ADediting_590364	chr17_1781193_-	UTR3
ADediting_590365	chr17_1781194_-	UTR3
ADediting_590366	chr17_1781202_-	UTR3
ADediting_590367	chr17_1781212_-	UTR3
ADediting_590368	chr17_1781216_-	UTR3
ADediting_590370	chr17_1781764_-	UTR3
ADediting_590371	chr17_1781765_-	UTR3
ADediting_590372	chr17_1781792_-	UTR3
ADediting_590373	chr17_1781804_-	UTR3
ADediting_590374	chr17_1781818_-	UTR3
ADediting_590376	chr17_1782427_-	UTR3
ADediting_590377	chr17_1782443_-	UTR3
ADediting_590392	chr17_1782834_-	UTR3
ADediting_590393	chr17_1782835_-	UTR3
ADediting_590566	chr17_1785684_-	intronic
ADediting_590616	chr17_1788645_-	intronic
ADediting_590624	chr17_1790579_-	intronic
ADediting_590625	chr17_1790628_-	intronic
ADediting_590627	chr17_1790641_-	intronic
ADediting_590628	chr17_1790654_-	intronic
ADediting_590629	chr17_1790655_-	intronic
ADediting_590630	chr17_1790694_-	intronic
ADediting_590631	chr17_1790699_-	intronic
ADediting_590632	chr17_1790720_-	intronic
ADediting_590633	chr17_1790721_-	intronic
ADediting_590640	chr17_1790962_-	intronic
ADediting_590643	chr17_1791005_-	intronic
ADediting_590644	chr17_1791015_-	intronic
ADediting_590645	chr17_1791064_-	intronic
ADediting_590734	chr17_1792135_-	intronic
ADediting_590735	chr17_1792268_-	intronic
ADediting_590736	chr17_1792298_-	intronic
ADediting_590741	chr17_1792454_-	intronic
ADediting_590743	chr17_1792589_-	intronic
ADediting_590744	chr17_1792635_-	intronic
ADediting_590886	chr17_1795559_-	intronic
ADediting_590967	chr17_1796513_-	intronic
ADediting_590985	chr17_1796601_-	intronic
ADediting_590993	chr17_1796619_-	intronic
ADediting_590994	chr17_1796656_-	intronic
ADediting_590995	chr17_1796663_-	intronic
ADediting_590996	chr17_1796707_-	intronic
ADediting_590997	chr17_1796710_-	intronic
ADediting_590998	chr17_1796714_-	intronic
ADediting_591069	chr17_1797810_-	intronic
ADediting_591070	chr17_1797836_-	intronic
ADediting_591071	chr17_1797889_-	intronic
ADediting_591072	chr17_1797890_-	intronic
ADediting_591073	chr17_1797919_-	intronic
ADediting_591074	chr17_1797926_-	intronic
ADediting_591075	chr17_1797958_-	intronic
ADediting_591076	chr17_1798223_-	intronic
ADediting_591077	chr17_1798233_-	intronic
ADediting_591078	chr17_1798259_-	intronic
ADediting_591079	chr17_1798815_-	intronic
ADediting_591080	chr17_1798830_-	intronic
ADediting_591081	chr17_1798847_-	intronic
ADediting_591082	chr17_1799616_-	intronic
ADediting_591083	chr17_1799649_-	intronic
ADediting_591085	chr17_1801732_-	intronic
ADediting_591163	chr17_1805182_-	intronic
ADediting_591164	chr17_1805199_-	intronic
ADediting_591165	chr17_1805296_-	intronic
ADediting_591166	chr17_1805306_-	intronic
ADediting_591167	chr17_1805309_-	intronic
ADediting_591168	chr17_1805310_-	intronic
ADediting_591169	chr17_1805342_-	intronic
ADediting_591174	chr17_1805624_-	intronic
ADediting_591175	chr17_1805730_-	intronic
ADediting_591177	chr17_1805760_-	intronic
ADediting_591178	chr17_1805798_-	intronic
ADediting_591195	chr17_1806053_-	intronic
ADediting_591197	chr17_1806063_-	intronic
ADediting_591206	chr17_1806099_-	intronic
ADediting_591207	chr17_1806130_-	intronic
ADediting_591208	chr17_1806131_-	intronic
ADediting_591224	chr17_1807028_-	intronic
ADediting_591225	chr17_1807029_-	intronic
ADediting_591226	chr17_1807109_-	intronic
ADediting_591227	chr17_1807609_-	intronic
ADediting_591283	chr17_1809650_-	intronic
ADediting_591285	chr17_1811724_-	intronic
ADediting_591286	chr17_1811761_-	intronic
ADediting_591287	chr17_1811832_-	intronic
ADediting_591288	chr17_1811875_-	intronic
ADediting_591289	chr17_1811891_-	intronic
ADediting_591290	chr17_1814699_-	UTR3
ADediting_591291	chr17_1814702_-	UTR3
ADediting_591292	chr17_1814747_-	exonic
ADediting_591293	chr17_1814771_-	exonic
ADediting_591294	chr17_1816537_-	intronic
ADediting_591295	chr17_1817175_-	intronic
ADediting_591296	chr17_1817843_-	intronic
ADediting_591297	chr17_1817858_-	intronic
ADediting_591298	chr17_1817925_-	intronic
ADediting_591299	chr17_1817935_-	intronic
ADediting_591333	chr17_1819177_-	intronic
ADediting_591337	chr17_1819235_-	intronic
ADediting_591338	chr17_1819279_-	intronic
ADediting_591358	chr17_1819311_-	intronic
ADediting_591359	chr17_1819313_-	intronic
ADediting_591383	chr17_1820034_-	intronic
ADediting_591384	chr17_1820043_-	intronic
ADediting_591406	chr17_1823136_-	intronic
ADediting_591407	chr17_1824090_-	intronic
ADediting_591408	chr17_1824151_-	intronic
ADediting_1545467	chr17_1780343_-	UTR3
ADediting_1545473	chr17_1780687_-	UTR3
ADediting_1545474	chr17_1780828_-	UTR3
ADediting_1545475	chr17_1781017_-	UTR3
ADediting_1545476	chr17_1781091_-	UTR3
ADediting_1545477	chr17_1781185_-	UTR3
ADediting_1626050	chr17_1793932_-	intronic
ADediting_1626058	chr17_1805690_-	intronic
ADediting_1626060	chr17_1807106_-	intronic

Repat-regional RNA editing(s).

ADeditome ID	Position	Repeat family	Repeat sub family	Repeat name
ADediting_590267	chr17_1780248_-	SINE	Alu	Name=AluJb
ADediting_590270	chr17_1780270_-	SINE	Alu	Name=AluJb
ADediting_590271	chr17_1780278_-	SINE	Alu	Name=AluJb
ADediting_590274	chr17_1780285_-	SINE	Alu	Name=AluJb
ADediting_590275	chr17_1780286_-	SINE	Alu	Name=AluJb
ADediting_590277	chr17_1780290_-	SINE	Alu	Name=AluJb
ADediting_590279	chr17_1780294_-	SINE	Alu	Name=AluJb
ADediting_590283	chr17_1780307_-	SINE	Alu	Name=AluJb
ADediting_590284	chr17_1780315_-	SINE	Alu	Name=AluJb
ADediting_590285	chr17_1780320_-	SINE	Alu	Name=AluJb
ADediting_590286	chr17_1780326_-	SINE	Alu	Name=AluJb
ADediting_590287	chr17_1780330_-	SINE	Alu	Name=AluJb
ADediting_590288	chr17_1780335_-	SINE	Alu	Name=AluJb
ADediting_590289	chr17_1780353_-	SINE	Alu	Name=AluJb
ADediting_590290	chr17_1780363_-	SINE	Alu	Name=AluJb
ADediting_590292	chr17_1780371_-	SINE	Alu	Name=AluJb
ADediting_590293	chr17_1780416_-	SINE	Alu	Name=AluJb
ADediting_590294	chr17_1780433_-	SINE	Alu	Name=AluJb
ADediting_590295	chr17_1780434_-	SINE	Alu	Name=AluJb
ADediting_590296	chr17_1780435_-	SINE	Alu	Name=AluJb
ADediting_590297	chr17_1780436_-	SINE	Alu	Name=AluJb
ADediting_590298	chr17_1780444_-	SINE	Alu	Name=AluJb
ADediting_590299	chr17_1780454_-	SINE	Alu	Name=AluJb
ADediting_590300	chr17_1780475_-	SINE	Alu	Name=AluJb
ADediting_590301	chr17_1780496_-	SINE	Alu	Name=AluJb
ADediting_590302	chr17_1780506_-	SINE	Alu	Name=AluJb
ADediting_590303	chr17_1780674_-	SINE	Alu	Name=AluYm1
ADediting_590304	chr17_1780694_-	SINE	Alu	Name=AluYm1
ADediting_590305	chr17_1780698_-	SINE	Alu	Name=AluYm1
ADediting_590306	chr17_1780707_-	SINE	Alu	Name=AluYm1
ADediting_590307	chr17_1780718_-	SINE	Alu	Name=AluYm1
ADediting_590308	chr17_1780733_-	SINE	Alu	Name=AluYm1
ADediting_590309	chr17_1780743_-	SINE	Alu	Name=AluYm1
ADediting_590310	chr17_1780750_-	SINE	Alu	Name=AluYm1
ADediting_590311	chr17_1780754_-	SINE	Alu	Name=AluYm1
ADediting_590312	chr17_1780756_-	SINE	Alu	Name=AluYm1
ADediting_590313	chr17_1780760_-	SINE	Alu	Name=AluYm1
ADediting_590314	chr17_1780786_-	SINE	Alu	Name=AluYm1
ADediting_590315	chr17_1780790_-	SINE	Alu	Name=AluYm1
ADediting_590316	chr17_1780797_-	SINE	Alu	Name=AluYm1
ADediting_590317	chr17_1780817_-	SINE	Alu	Name=AluYm1
ADediting_590318	chr17_1780818_-	SINE	Alu	Name=AluYm1
ADediting_590319	chr17_1780819_-	SINE	Alu	Name=AluYm1
ADediting_590320	chr17_1780825_-	SINE	Alu	Name=AluYm1
ADediting_590321	chr17_1780827_-	SINE	Alu	Name=AluYm1
ADediting_590322	chr17_1780851_-	SINE	Alu	Name=AluYm1
ADediting_590323	chr17_1780868_-	SINE	Alu	Name=AluYm1
ADediting_590324	chr17_1780894_-	SINE	Alu	Name=AluYm1
ADediting_590325	chr17_1780895_-	SINE	Alu	Name=AluYm1
ADediting_590326	chr17_1780902_-	SINE	Alu	Name=AluYm1
ADediting_590327	chr17_1780903_-	SINE	Alu	Name=AluYm1
ADediting_590328	chr17_1780962_-	SINE	Alu	Name=AluSx1
ADediting_590329	chr17_1780972_-	SINE	Alu	Name=AluSx1
ADediting_590330	chr17_1780985_-	SINE	Alu	Name=AluSx1
ADediting_590331	chr17_1780992_-	SINE	Alu	Name=AluSx1
ADediting_590332	chr17_1780996_-	SINE	Alu	Name=AluSx1
ADediting_590333	chr17_1781012_-	SINE	Alu	Name=AluSx1
ADediting_590334	chr17_1781016_-	SINE	Alu	Name=AluSx1
ADediting_590335	chr17_1781025_-	SINE	Alu	Name=AluSx1
ADediting_590336	chr17_1781031_-	SINE	Alu	Name=AluSx1
ADediting_590337	chr17_1781048_-	SINE	Alu	Name=AluSx1
ADediting_590338	chr17_1781052_-	SINE	Alu	Name=AluSx1
ADediting_590339	chr17_1781057_-	SINE	Alu	Name=AluSx1
ADediting_590340	chr17_1781058_-	SINE	Alu	Name=AluSx1
ADediting_590341	chr17_1781064_-	SINE	Alu	Name=AluSx1
ADediting_590342	chr17_1781080_-	SINE	Alu	Name=AluSx1
ADediting_590343	chr17_1781084_-	SINE	Alu	Name=AluSx1
ADediting_590344	chr17_1781094_-	SINE	Alu	Name=AluSx1
ADediting_590345	chr17_1781096_-	SINE	Alu	Name=AluSx1
ADediting_590346	chr17_1781097_-	SINE	Alu	Name=AluSx1
ADediting_590347	chr17_1781098_-	SINE	Alu	Name=AluSx1
ADediting_590348	chr17_1781103_-	SINE	Alu	Name=AluSx1
ADediting_590349	chr17_1781109_-	SINE	Alu	Name=AluSx1
ADediting_590350	chr17_1781114_-	SINE	Alu	Name=AluSx1
ADediting_590351	chr17_1781115_-	SINE	Alu	Name=AluSx1
ADediting_590352	chr17_1781116_-	SINE	Alu	Name=AluSx1
ADediting_590353	chr17_1781122_-	SINE	Alu	Name=AluSx1
ADediting_590354	chr17_1781124_-	SINE	Alu	Name=AluSx1
ADediting_590355	chr17_1781125_-	SINE	Alu	Name=AluSx1
ADediting_590356	chr17_1781134_-	SINE	Alu	Name=AluSx1
ADediting_590357	chr17_1781137_-	SINE	Alu	Name=AluSx1
ADediting_590358	chr17_1781139_-	SINE	Alu	Name=AluSx1
ADediting_590359	chr17_1781140_-	SINE	Alu	Name=AluSx1
ADediting_590360	chr17_1781148_-	SINE	Alu	Name=AluSx1
ADediting_590361	chr17_1781158_-	SINE	Alu	Name=AluSx1
ADediting_590362	chr17_1781171_-	SINE	Alu	Name=AluSx1
ADediting_590363	chr17_1781172_-	SINE	Alu	Name=AluSx1
ADediting_590364	chr17_1781193_-	SINE	Alu	Name=AluSx1
ADediting_590365	chr17_1781194_-	SINE	Alu	Name=AluSx1
ADediting_590366	chr17_1781202_-	SINE	Alu	Name=AluSx1
ADediting_590367	chr17_1781212_-	SINE	Alu	Name=AluSx1
ADediting_590368	chr17_1781216_-	SINE	Alu	Name=AluSx1
ADediting_590370	chr17_1781764_-	SINE	Alu	Name=AluSq2
ADediting_590371	chr17_1781765_-	SINE	Alu	Name=AluSq2
ADediting_590372	chr17_1781792_-	SINE	Alu	Name=AluSq2
ADediting_590373	chr17_1781804_-	SINE	Alu	Name=AluSq2
ADediting_590374	chr17_1781818_-	SINE	Alu	Name=AluSq2
ADediting_590376	chr17_1782427_-	SINE	Alu	Name=FRAM
ADediting_590377	chr17_1782443_-	SINE	Alu	Name=FRAM
ADediting_590392	chr17_1782834_-	SINE	Alu	Name=AluYc
ADediting_590393	chr17_1782835_-	SINE	Alu	Name=AluYc
ADediting_590566	chr17_1785684_-	SINE	Alu	Name=AluSz
ADediting_590616	chr17_1788645_-	SINE	Alu	Name=AluSc8
ADediting_590624	chr17_1790579_-	SINE	Alu	Name=AluSg
ADediting_590625	chr17_1790628_-	SINE	Alu	Name=AluSg
ADediting_590627	chr17_1790641_-	SINE	Alu	Name=AluSg
ADediting_590628	chr17_1790654_-	SINE	Alu	Name=AluSg
ADediting_590629	chr17_1790655_-	SINE	Alu	Name=AluSg
ADediting_590630	chr17_1790694_-	SINE	Alu	Name=AluSg
ADediting_590631	chr17_1790699_-	SINE	Alu	Name=AluSg
ADediting_590632	chr17_1790720_-	SINE	Alu	Name=AluSg
ADediting_590633	chr17_1790721_-	SINE	Alu	Name=AluSg
ADediting_590640	chr17_1790962_-	SINE	Alu	Name=AluY
ADediting_590643	chr17_1791005_-	SINE	Alu	Name=AluY
ADediting_590644	chr17_1791015_-	SINE	Alu	Name=AluY
ADediting_590645	chr17_1791064_-	SINE	Alu	Name=AluY
ADediting_590734	chr17_1792135_-	SINE	Alu	Name=AluYm1
ADediting_590735	chr17_1792268_-	SINE	Alu	Name=AluYm1
ADediting_590736	chr17_1792298_-	SINE	Alu	Name=AluYm1
ADediting_590741	chr17_1792454_-	SINE	Alu	Name=AluSc8
ADediting_590743	chr17_1792589_-	SINE	Alu	Name=AluSc8
ADediting_590744	chr17_1792635_-	SINE	Alu	Name=AluSc8
ADediting_590886	chr17_1795559_-	SINE	Alu	Name=AluSx1
ADediting_590967	chr17_1796513_-	SINE	Alu	Name=AluSc
ADediting_590985	chr17_1796601_-	SINE	Alu	Name=AluSc
ADediting_590993	chr17_1796619_-	SINE	Alu	Name=AluSc
ADediting_590994	chr17_1796656_-	SINE	Alu	Name=AluSc
ADediting_590995	chr17_1796663_-	SINE	Alu	Name=AluSc
ADediting_590996	chr17_1796707_-	SINE	Alu	Name=AluSc
ADediting_590997	chr17_1796710_-	SINE	Alu	Name=AluSc
ADediting_590998	chr17_1796714_-	SINE	Alu	Name=AluSc
ADediting_591069	chr17_1797810_-	SINE	Alu	Name=AluSx
ADediting_591070	chr17_1797836_-	SINE	Alu	Name=AluSx
ADediting_591071	chr17_1797889_-	SINE	Alu	Name=AluSx
ADediting_591072	chr17_1797890_-	SINE	Alu	Name=AluSx
ADediting_591073	chr17_1797919_-	SINE	Alu	Name=AluSx
ADediting_591074	chr17_1797926_-	SINE	Alu	Name=AluSx
ADediting_591075	chr17_1797958_-	SINE	Alu	Name=AluSx
ADediting_591076	chr17_1798223_-	SINE	Alu	Name=AluJb
ADediting_591077	chr17_1798233_-	SINE	Alu	Name=AluJb
ADediting_591078	chr17_1798259_-	SINE	Alu	Name=AluJb
ADediting_591079	chr17_1798815_-	SINE	Alu	Name=AluSz6
ADediting_591080	chr17_1798830_-	SINE	Alu	Name=AluSz6
ADediting_591081	chr17_1798847_-	SINE	Alu	Name=AluSz6
ADediting_591082	chr17_1799616_-	SINE	Alu	Name=AluSc
ADediting_591083	chr17_1799649_-	SINE	Alu	Name=AluSc
ADediting_591085	chr17_1801732_-	SINE	Alu	Name=AluSc8
ADediting_591163	chr17_1805182_-	SINE	Alu	Name=AluSz6
ADediting_591164	chr17_1805199_-	SINE	Alu	Name=AluSz6
ADediting_591165	chr17_1805296_-	SINE	Alu	Name=AluSz6
ADediting_591166	chr17_1805306_-	SINE	Alu	Name=AluSz6
ADediting_591167	chr17_1805309_-	SINE	Alu	Name=AluSz6
ADediting_591168	chr17_1805310_-	SINE	Alu	Name=AluSz6
ADediting_591169	chr17_1805342_-	SINE	Alu	Name=AluSz6
ADediting_591174	chr17_1805624_-	SINE	Alu	Name=AluSz6
ADediting_591175	chr17_1805730_-	SINE	Alu	Name=AluSz6
ADediting_591177	chr17_1805760_-	SINE	Alu	Name=AluSz6
ADediting_591178	chr17_1805798_-	SINE	Alu	Name=AluSz6
ADediting_591195	chr17_1806053_-	SINE	Alu	Name=AluY
ADediting_591197	chr17_1806063_-	SINE	Alu	Name=AluY
ADediting_591206	chr17_1806099_-	SINE	Alu	Name=AluY
ADediting_591207	chr17_1806130_-	SINE	Alu	Name=AluY
ADediting_591208	chr17_1806131_-	SINE	Alu	Name=AluY
ADediting_591224	chr17_1807028_-	SINE	Alu	Name=AluSx
ADediting_591225	chr17_1807029_-	SINE	Alu	Name=AluSx
ADediting_591226	chr17_1807109_-	SINE	Alu	Name=AluSx
ADediting_591227	chr17_1807609_-	SINE	Alu	Name=AluSx
ADediting_591283	chr17_1809650_-	SINE	Alu	Name=AluSx3
ADediting_591285	chr17_1811724_-	SINE	Alu	Name=AluSx
ADediting_591286	chr17_1811761_-	SINE	Alu	Name=AluSx
ADediting_591287	chr17_1811832_-	SINE	Alu	Name=AluSx
ADediting_591288	chr17_1811875_-	SINE	Alu	Name=AluSx
ADediting_591289	chr17_1811891_-	SINE	Alu	Name=AluSx
ADediting_591290	chr17_1814699_-	SINE	Alu	Name=AluSq2
ADediting_591291	chr17_1814702_-	SINE	Alu	Name=AluSq2
ADediting_591292	chr17_1814747_-	SINE	Alu	Name=AluSq2
ADediting_591293	chr17_1814771_-	SINE	Alu	Name=AluSq2
ADediting_591294	chr17_1816537_-	SINE	Alu	Name=AluSc8
ADediting_591295	chr17_1817175_-	SINE	Alu	Name=AluSz
ADediting_591296	chr17_1817843_-	SINE	Alu	Name=AluY
ADediting_591297	chr17_1817858_-	SINE	Alu	Name=AluY
ADediting_591298	chr17_1817925_-	SINE	Alu	Name=AluY
ADediting_591299	chr17_1817935_-	SINE	Alu	Name=AluY
ADediting_591333	chr17_1819177_-	SINE	Alu	Name=AluSx
ADediting_591337	chr17_1819235_-	SINE	Alu	Name=AluSx
ADediting_591338	chr17_1819279_-	SINE	Alu	Name=AluSx
ADediting_591358	chr17_1819311_-	SINE	Alu	Name=AluSx
ADediting_591359	chr17_1819313_-	SINE	Alu	Name=AluSx
ADediting_591383	chr17_1820034_-	SINE	Alu	Name=AluSx1
ADediting_591384	chr17_1820043_-	SINE	Alu	Name=AluSx1
ADediting_591406	chr17_1823136_-	SINE	Alu	Name=AluY
ADediting_591407	chr17_1824090_-	SINE	Alu	Name=AluSx
ADediting_591408	chr17_1824151_-	SINE	Alu	Name=AluSx
ADediting_1545467	chr17_1780343_-	SINE	Alu	Name=AluJb
ADediting_1545473	chr17_1780687_-	SINE	Alu	Name=AluYm1
ADediting_1545474	chr17_1780828_-	SINE	Alu	Name=AluYm1
ADediting_1545475	chr17_1781017_-	SINE	Alu	Name=AluSx1
ADediting_1545476	chr17_1781091_-	SINE	Alu	Name=AluSx1
ADediting_1545477	chr17_1781185_-	SINE	Alu	Name=AluSx1
ADediting_1626050	chr17_1793932_-	SINE	Alu	Name=AluSq
ADediting_1626058	chr17_1805690_-	SINE	Alu	Name=AluSz6
ADediting_1626060	chr17_1807106_-	SINE	Alu	Name=AluSx

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RNA A-to-I editing events in the alternative splicing sites for SMYD4

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

ADeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for SMYD4

Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event.
* The grey color means N/A.

Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

- Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

ADeditome ID

Chr

Positoing

Skipped exon

ENSG

ENSTs

Top

Protein coding region RNA A-to-I editings for SMYD4

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for SMYD4

RNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

ADeditom_ID	Position	ENSG	ENST	Transcript name	miRNA ID	Chromosome	Targt	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
ADediting_1545467	chr17_1780343_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-3665	chr17	1780342	1780348	7mer-m8	1780341	1780358	143	-21.93
ADediting_1545473	chr17_1780687_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-6790-3p	chr17	1780685	1780691	7mer-m8	1780684	1780704	150	-27.71
ADediting_1545474	chr17_1780828_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-3157-5p	chr17	1780827	1780833	7mer-m8	1780826	1780847	159	-20.17
ADediting_1545476	chr17_1781091_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-4742-3p	chr17	1781090	1781097	8mer-1a	1781090	1781112	142	-9.18
ADediting_1545477	chr17_1781185_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-518a-3p	chr17	1781181	1781187	7mer-m8	1781180	1781201	145	-17.15
ADediting_1545477	chr17_1781185_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-518b	chr17	1781181	1781187	7mer-m8	1781180	1781200	146	-21.79
ADediting_1545477	chr17_1781185_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-518c-3p	chr17	1781181	1781187	7mer-m8	1781180	1781201	146	-18.98
ADediting_1545477	chr17_1781185_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-518d-3p	chr17	1781181	1781187	7mer-m8	1781180	1781200	145	-17.84
ADediting_1545477	chr17_1781185_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-518e-3p	chr17	1781182	1781188	7mer-m8	1781181	1781202	144	-18.65
ADediting_1545477	chr17_1781185_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-518f-3p	chr17	1781181	1781187	7mer-m8	1781180	1781200	145	-17.48
ADediting_1545477	chr17_1781185_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-526a-3p	chr17	1781181	1781187	7mer-m8	1781180	1781200	146	-17.71
ADediting_590266	chr17_1779971_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-1972	chr17	1779966	1779972	7mer-m8	1779965	1779988	152	-24.51
ADediting_590267	chr17_1780248_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-6794-3p	chr17	1780247	1780253	7mer-m8	1780246	1780263	150	-20.62
ADediting_590274	chr17_1780285_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-149-5p	chr17	1780285	1780291	7mer-m8	1780284	1780308	156	-24.38
ADediting_590275	chr17_1780286_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-4638-5p	chr17	1780283	1780290	8mer-1a	1780283	1780304	148	-18.84
ADediting_590277	chr17_1780290_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-324-3p	chr17	1780290	1780296	7mer-m8	1780289	1780312	146	-29.12
ADediting_590283	chr17_1780307_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-4690-3p	chr17	1780301	1780308	8mer-1a	1780301	1780318	150	-21.91
ADediting_590283	chr17_1780307_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-4733-3p	chr17	1780307	1780313	7mer-m8	1780306	1780327	149	-22.65
ADediting_590283	chr17_1780307_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-5685	chr17	1780301	1780308	8mer-1a	1780301	1780321	158	-26.05
ADediting_590284	chr17_1780315_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-4726-3p	chr17	1780314	1780320	7mer-m8	1780313	1780335	151	-24.07
ADediting_590287	chr17_1780330_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-7977	chr17	1780328	1780334	7mer-m8	1780327	1780344	140	-14.53
ADediting_590288	chr17_1780335_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-6819-3p	chr17	1780332	1780338	7mer-m8	1780331	1780351	140	-11.01
ADediting_590288	chr17_1780335_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-6877-3p	chr17	1780332	1780338	7mer-m8	1780331	1780351	140	-17.96
ADediting_590289	chr17_1780353_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-140-3p	chr17	1780351	1780357	7mer-m8	1780350	1780370	155	-20.7
ADediting_590290	chr17_1780363_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-4787-3p	chr17	1780360	1780366	7mer-m8	1780359	1780380	157	-24.08
ADediting_590293	chr17_1780416_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-1279	chr17	1780416	1780422	7mer-m8	1780415	1780431	147	-12.2
ADediting_590293	chr17_1780416_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-6511a-3p	chr17	1780410	1780417	8mer-1a	1780410	1780431	145	-18.84
ADediting_590293	chr17_1780416_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-6511b-3p	chr17	1780410	1780417	8mer-1a	1780410	1780432	140	-17.97
ADediting_590294	chr17_1780433_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-5580-5p	chr17	1780428	1780434	7mer-m8	1780427	1780448	140	-14.3
ADediting_590295	chr17_1780434_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-3663-5p	chr17	1780429	1780435	7mer-m8	1780428	1780452	143	-28.48
ADediting_590296	chr17_1780435_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-12113	chr17	1780434	1780441	8mer-1a	1780434	1780452	152	-22.07
ADediting_590296	chr17_1780435_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-152-5p	chr17	1780430	1780437	8mer-1a	1780430	1780452	142	-17.09
ADediting_590296	chr17_1780435_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-4539	chr17	1780434	1780441	8mer-1a	1780434	1780458	159	-23.88
ADediting_590300	chr17_1780475_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-186-3p	chr17	1780473	1780480	8mer-1a	1780473	1780494	140	-20.42
ADediting_590304	chr17_1780694_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-324-3p	chr17	1780694	1780700	7mer-m8	1780693	1780712	145	-21.9
ADediting_590304	chr17_1780694_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-6075	chr17	1780689	1780696	8mer-1a	1780689	1780707	144	-21.03
ADediting_590306	chr17_1780707_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-4268	chr17	1780703	1780709	7mer-m8	1780702	1780722	170	-29.84
ADediting_590306	chr17_1780707_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-5193	chr17	1780705	1780712	8mer-1a	1780705	1780728	155	-30.82
ADediting_590307	chr17_1780718_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-4284	chr17	1780716	1780722	7mer-m8	1780715	1780732	148	-23.05
ADediting_590307	chr17_1780718_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-4437	chr17	1780715	1780721	7mer-m8	1780714	1780734	140	-15.06
ADediting_590310	chr17_1780750_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-646	chr17	1780748	1780754	7mer-m8	1780747	1780765	145	-15.13
ADediting_590313	chr17_1780760_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-6768-5p	chr17	1780759	1780765	7mer-m8	1780758	1780780	140	-20.05
ADediting_590316	chr17_1780797_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-153-5p	chr17	1780797	1780803	7mer-m8	1780796	1780818	144	-8.17
ADediting_590316	chr17_1780797_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-3680-3p	chr17	1780792	1780799	8mer-1a	1780792	1780814	140	-14.25
ADediting_590317	chr17_1780817_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-412-3p	chr17	1780817	1780823	7mer-m8	1780816	1780838	151	-19.78
ADediting_590317	chr17_1780817_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-4508	chr17	1780812	1780818	7mer-m8	1780811	1780826	141	-24.29
ADediting_590317	chr17_1780817_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-6754-3p	chr17	1780817	1780823	7mer-m8	1780816	1780836	146	-16.46
ADediting_590318	chr17_1780818_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-1229-3p	chr17	1780817	1780823	7mer-m8	1780816	1780838	140	-13.5
ADediting_590319	chr17_1780819_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-23a-5p	chr17	1780814	1780820	7mer-m8	1780813	1780835	144	-20.42
ADediting_590319	chr17_1780819_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-23b-5p	chr17	1780814	1780820	7mer-m8	1780813	1780833	144	-14.59
ADediting_590323	chr17_1780868_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-4707-3p	chr17	1780864	1780871	8mer-1a	1780864	1780885	154	-23.67
ADediting_590324	chr17_1780894_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-8052	chr17	1780889	1780895	7mer-1a	1780889	1780907	140	-24.15
ADediting_590325	chr17_1780895_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-513a-5p	chr17	1780894	1780900	7mer-m8	1780893	1780910	144	-16.68
ADediting_590325	chr17_1780895_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-638	chr17	1780889	1780895	7mer-1a	1780889	1780915	154	-34.19
ADediting_590326	chr17_1780902_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-1199-5p	chr17	1780902	1780908	7mer-m8	1780901	1780917	150	-29.33
ADediting_590326	chr17_1780902_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-4650-5p	chr17	1780897	1780903	7mer-m8	1780896	1780913	143	-19.63
ADediting_590326	chr17_1780902_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-6751-3p	chr17	1780902	1780908	7mer-m8	1780901	1780920	148	-17.47
ADediting_590330	chr17_1780985_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-4670-5p	chr17	1780980	1780986	7mer-m8	1780979	1781005	150	-25.29
ADediting_590330	chr17_1780985_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-6790-3p	chr17	1780983	1780989	7mer-m8	1780982	1781002	150	-27.71
ADediting_590331	chr17_1780992_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-324-3p	chr17	1780992	1780998	7mer-m8	1780991	1781013	145	-25.24
ADediting_590331	chr17_1780992_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-6075	chr17	1780987	1780994	8mer-1a	1780987	1781008	150	-25.04
ADediting_590334	chr17_1781016_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-10400-3p	chr17	1781012	1781018	7mer-m8	1781011	1781032	140	-24.86
ADediting_590334	chr17_1781016_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-4437	chr17	1781012	1781019	8mer-1a	1781012	1781032	149	-20.34
ADediting_590334	chr17_1781016_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-4674	chr17	1781012	1781018	7mer-m8	1781011	1781031	152	-24.12
ADediting_590337	chr17_1781048_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-1207-3p	chr17	1781048	1781054	7mer-m8	1781047	1781064	140	-12.56
ADediting_590337	chr17_1781048_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-646	chr17	1781046	1781052	7mer-m8	1781045	1781063	145	-16.24
ADediting_590340	chr17_1781058_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-513a-5p	chr17	1781057	1781063	7mer-m8	1781056	1781073	140	-14.96
ADediting_590340	chr17_1781058_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-638	chr17	1781052	1781058	7mer-1a	1781052	1781076	143	-29.48
ADediting_590341	chr17_1781064_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-6789-3p	chr17	1781062	1781068	7mer-m8	1781061	1781081	151	-22.5
ADediting_590343	chr17_1781084_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-3190-5p	chr17	1781079	1781085	7mer-m8	1781078	1781097	147	-18.85
ADediting_590343	chr17_1781084_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-4328	chr17	1781084	1781090	7mer-m8	1781083	1781099	140	-10.31
ADediting_590343	chr17_1781084_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-4435	chr17	1781080	1781086	7mer-m8	1781079	1781100	140	-16.23
ADediting_590344	chr17_1781094_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-153-5p	chr17	1781094	1781100	7mer-m8	1781093	1781115	156	-8.16
ADediting_590344	chr17_1781094_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-3680-3p	chr17	1781089	1781096	8mer-1a	1781089	1781111	140	-11.75
ADediting_590347	chr17_1781098_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-630	chr17	1781092	1781099	8mer-1a	1781092	1781112	154	-12.54
ADediting_590349	chr17_1781109_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-483-5p	chr17	1781106	1781112	7mer-m8	1781105	1781126	140	-15.26
ADediting_590350	chr17_1781114_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-412-3p	chr17	1781114	1781120	7mer-m8	1781113	1781135	153	-17.3
ADediting_590350	chr17_1781114_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-6754-3p	chr17	1781114	1781120	7mer-m8	1781113	1781133	144	-15.76
ADediting_590351	chr17_1781115_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-1229-3p	chr17	1781114	1781120	7mer-m8	1781113	1781137	146	-16.14
ADediting_590351	chr17_1781115_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-6511a-3p	chr17	1781114	1781121	8mer-1a	1781114	1781135	145	-15.78
ADediting_590351	chr17_1781115_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-6511b-3p	chr17	1781114	1781121	8mer-1a	1781114	1781136	140	-14.97
ADediting_590352	chr17_1781116_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-23a-5p	chr17	1781111	1781117	7mer-m8	1781110	1781132	144	-21.43
ADediting_590352	chr17_1781116_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-23b-5p	chr17	1781111	1781117	7mer-m8	1781110	1781130	156	-19.96
ADediting_590353	chr17_1781122_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-1306-3p	chr17	1781122	1781128	7mer-m8	1781121	1781138	152	-23.71
ADediting_590354	chr17_1781124_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-3190-5p	chr17	1781124	1781130	7mer-m8	1781123	1781142	152	-19.64
ADediting_590357	chr17_1781137_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-3176	chr17	1781133	1781139	7mer-m8	1781132	1781150	160	-23.34
ADediting_590357	chr17_1781137_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-3922-3p	chr17	1781133	1781139	7mer-m8	1781132	1781157	165	-26.76
ADediting_590358	chr17_1781139_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-12113	chr17	1781139	1781145	7mer-m8	1781138	1781161	150	-22.35
ADediting_590358	chr17_1781139_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-4539	chr17	1781139	1781145	7mer-m8	1781138	1781162	146	-18.22
ADediting_590364	chr17_1781193_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-8052	chr17	1781188	1781194	7mer-1a	1781188	1781206	140	-24.15
ADediting_590365	chr17_1781194_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-513a-5p	chr17	1781193	1781199	7mer-m8	1781192	1781209	144	-16.68
ADediting_590365	chr17_1781194_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-638	chr17	1781188	1781194	7mer-1a	1781188	1781212	159	-35.77
ADediting_590366	chr17_1781202_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-4634	chr17	1781198	1781204	7mer-m8	1781197	1781215	150	-21.12
ADediting_590367	chr17_1781212_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-1228-3p	chr17	1781210	1781216	7mer-m8	1781209	1781228	155	-19.75
ADediting_590367	chr17_1781212_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-6765-3p	chr17	1781212	1781218	7mer-m8	1781211	1781231	159	-26.31
ADediting_590368	chr17_1781216_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-941	chr17	1781212	1781219	8mer-1a	1781212	1781234	145	-16.97
ADediting_590370	chr17_1781764_-	ENSG00000186532.12	ENST00000491788.1	SMYD4-203	hsa-miR-4437	chr17	1781761	1781767	7mer-m8	1781760	1781780	146	-19.54
ADediting_590372	chr17_1781792_-	ENSG00000186532.12	ENST00000491788.1	SMYD4-203	hsa-miR-7112-5p	chr17	1781792	1781798	7mer-m8	1781791	1781813	148	-19.5
ADediting_590373	chr17_1781804_-	ENSG00000186532.12	ENST00000491788.1	SMYD4-203	hsa-miR-378a-3p	chr17	1781799	1781805	7mer-m8	1781798	1781821	148	-18.67
ADediting_590373	chr17_1781804_-	ENSG00000186532.12	ENST00000491788.1	SMYD4-203	hsa-miR-378b	chr17	1781799	1781805	7mer-m8	1781798	1781815	149	-20.14
ADediting_590373	chr17_1781804_-	ENSG00000186532.12	ENST00000491788.1	SMYD4-203	hsa-miR-378c	chr17	1781799	1781805	7mer-m8	1781798	1781824	148	-18.34
ADediting_590373	chr17_1781804_-	ENSG00000186532.12	ENST00000491788.1	SMYD4-203	hsa-miR-378d	chr17	1781799	1781805	7mer-m8	1781798	1781819	148	-18.34
ADediting_590373	chr17_1781804_-	ENSG00000186532.12	ENST00000491788.1	SMYD4-203	hsa-miR-378e	chr17	1781799	1781805	7mer-m8	1781798	1781818	148	-18.21
ADediting_590373	chr17_1781804_-	ENSG00000186532.12	ENST00000491788.1	SMYD4-203	hsa-miR-378f	chr17	1781799	1781805	7mer-m8	1781798	1781817	146	-16.47
ADediting_590373	chr17_1781804_-	ENSG00000186532.12	ENST00000491788.1	SMYD4-203	hsa-miR-378h	chr17	1781799	1781805	7mer-m8	1781798	1781820	154	-22.46
ADediting_590373	chr17_1781804_-	ENSG00000186532.12	ENST00000491788.1	SMYD4-203	hsa-miR-378i	chr17	1781799	1781805	7mer-m8	1781798	1781820	156	-18.97
ADediting_590373	chr17_1781804_-	ENSG00000186532.12	ENST00000491788.1	SMYD4-203	hsa-miR-422a	chr17	1781799	1781805	7mer-m8	1781798	1781821	155	-21.25
ADediting_590374	chr17_1781818_-	ENSG00000186532.12	ENST00000491788.1	SMYD4-203	hsa-miR-6807-5p	chr17	1781813	1781819	7mer-m8	1781812	1781833	141	-20.58
ADediting_590377	chr17_1782443_-	ENSG00000186532.12	ENST00000491788.1	SMYD4-203	hsa-miR-4793-3p	chr17	1782440	1782446	7mer-m8	1782439	1782461	149	-19.2
ADediting_590377	chr17_1782443_-	ENSG00000186532.12	ENST00000491788.1	SMYD4-203	hsa-miR-7703	chr17	1782441	1782447	7mer-m8	1782440	1782462	162	-27.48
ADediting_590392	chr17_1782834_-	ENSG00000186532.12	ENST00000491788.1	SMYD4-203	hsa-miR-149-5p	chr17	1782834	1782840	7mer-m8	1782833	1782858	147	-25.95
ADediting_590393	chr17_1782835_-	ENSG00000186532.12	ENST00000491788.1	SMYD4-203	hsa-miR-4638-5p	chr17	1782832	1782839	8mer-1a	1782832	1782851	146	-21.99

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

ADeditom_ID	Position	ENSG	ENST	Transcript name	miRNA ID	Chromosome	Targt	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
ADediting_1545467	chr17_1780343_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-6802-5p	chr17	1780343	1780349	7mer-m8	1780342	1780361	146	-17.95
ADediting_1545474	chr17_1780828_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-3152-3p	chr17	1780824	1780830	7mer-m8	1780823	1780843	145	-18.08
ADediting_1545477	chr17_1781185_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-302a-3p	chr17	1781182	1781188	7mer-m8	1781181	1781202	143	-14.98
ADediting_1545477	chr17_1781185_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-302b-3p	chr17	1781182	1781188	7mer-m8	1781181	1781203	141	-9.83
ADediting_1545477	chr17_1781185_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-302c-3p	chr17	1781182	1781188	7mer-m8	1781181	1781201	145	-11.96
ADediting_1545477	chr17_1781185_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-302d-3p	chr17	1781182	1781188	7mer-m8	1781181	1781208	148	-13.74
ADediting_1545477	chr17_1781185_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-302e	chr17	1781182	1781188	7mer-m8	1781181	1781197	141	-8.62
ADediting_1545477	chr17_1781185_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-372-3p	chr17	1781182	1781188	7mer-m8	1781181	1781208	155	-20.46
ADediting_1545477	chr17_1781185_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-512-3p	chr17	1781183	1781189	7mer-m8	1781182	1781203	149	-15.51
ADediting_1545477	chr17_1781185_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-519d-3p	chr17	1781181	1781187	7mer-m8	1781180	1781200	146	-14.53
ADediting_1545477	chr17_1781185_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-520a-3p	chr17	1781182	1781188	7mer-m8	1781181	1781202	140	-11.03
ADediting_1545477	chr17_1781185_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-520b-3p	chr17	1781182	1781188	7mer-m8	1781181	1781200	141	-16.52
ADediting_1545477	chr17_1781185_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-520c-3p	chr17	1781182	1781188	7mer-m8	1781181	1781201	146	-16.52
ADediting_1545477	chr17_1781185_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-520d-3p	chr17	1781182	1781188	7mer-m8	1781181	1781202	140	-15.12
ADediting_1545477	chr17_1781185_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-520e-3p	chr17	1781182	1781188	7mer-m8	1781181	1781201	140	-13.32
ADediting_1545477	chr17_1781185_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-520g-3p	chr17	1781180	1781186	7mer-m8	1781179	1781201	151	-16.77
ADediting_1545477	chr17_1781185_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-520h	chr17	1781180	1781186	7mer-m8	1781179	1781200	150	-15.08
ADediting_1545477	chr17_1781185_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-526b-3p	chr17	1781181	1781187	7mer-m8	1781180	1781200	146	-16.66
ADediting_590267	chr17_1780248_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-200c-5p	chr17	1780244	1780250	7mer-m8	1780243	1780265	145	-13.13
ADediting_590267	chr17_1780248_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-550b-3p	chr17	1780245	1780252	8mer-1a	1780245	1780264	153	-21.83
ADediting_590270	chr17_1780270_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-504-3p	chr17	1780265	1780272	8mer-1a	1780265	1780285	151	-21.85
ADediting_590277	chr17_1780290_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-4284	chr17	1780286	1780293	8mer-1a	1780286	1780303	151	-16.94
ADediting_590279	chr17_1780294_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-1184	chr17	1780293	1780299	7mer-m8	1780292	1780318	143	-20
ADediting_590279	chr17_1780294_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-509-3-5p	chr17	1780292	1780298	7mer-m8	1780291	1780313	155	-19.27
ADediting_590279	chr17_1780294_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-509-5p	chr17	1780292	1780298	7mer-m8	1780291	1780311	143	-18.39
ADediting_590279	chr17_1780294_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-7156-3p	chr17	1780294	1780300	7mer-m8	1780293	1780315	142	-21.71
ADediting_590284	chr17_1780315_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-24-3p	chr17	1780312	1780318	7mer-m8	1780311	1780332	146	-13.14
ADediting_590284	chr17_1780315_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-3155a	chr17	1780310	1780316	7mer-m8	1780309	1780327	145	-21.99
ADediting_590284	chr17_1780315_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-3155b	chr17	1780310	1780316	7mer-m8	1780309	1780324	145	-21.35
ADediting_590284	chr17_1780315_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-3934-3p	chr17	1780313	1780319	7mer-m8	1780312	1780334	153	-19.4
ADediting_590284	chr17_1780315_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-484	chr17	1780310	1780316	7mer-m8	1780309	1780332	154	-25.62
ADediting_590285	chr17_1780320_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-125a-3p	chr17	1780315	1780322	8mer-1a	1780315	1780338	144	-17.72
ADediting_590285	chr17_1780320_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-7973	chr17	1780319	1780325	7mer-m8	1780318	1780337	150	-16.03
ADediting_590286	chr17_1780326_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-454-5p	chr17	1780323	1780329	7mer-m8	1780322	1780342	149	-17.65
ADediting_590287	chr17_1780330_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-6787-3p	chr17	1780328	1780335	8mer-1a	1780328	1780349	147	-17.63
ADediting_590289	chr17_1780353_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-7151-3p	chr17	1780353	1780359	7mer-m8	1780352	1780368	142	-17.85
ADediting_590289	chr17_1780353_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-8052	chr17	1780347	1780353	7mer-1a	1780347	1780365	143	-23.77
ADediting_590290	chr17_1780363_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-1227-3p	chr17	1780361	1780368	8mer-1a	1780361	1780380	155	-16.03
ADediting_590290	chr17_1780363_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-455-5p	chr17	1780360	1780366	7mer-m8	1780359	1780380	144	-16.65
ADediting_590290	chr17_1780363_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-4715-3p	chr17	1780363	1780369	7mer-m8	1780362	1780384	142	-17.78
ADediting_590294	chr17_1780433_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-2052	chr17	1780432	1780438	7mer-m8	1780431	1780450	140	-5.37
ADediting_590294	chr17_1780433_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-29b-1-5p	chr17	1780429	1780435	7mer-m8	1780428	1780452	144	-18.35
ADediting_590295	chr17_1780434_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-2052	chr17	1780432	1780438	7mer-m8	1780431	1780450	140	-5.37
ADediting_590295	chr17_1780434_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-29b-1-5p	chr17	1780429	1780435	7mer-m8	1780428	1780452	144	-18.35
ADediting_590296	chr17_1780435_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-2052	chr17	1780432	1780438	7mer-m8	1780431	1780450	140	-5.37
ADediting_590297	chr17_1780436_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-2052	chr17	1780432	1780438	7mer-m8	1780431	1780450	140	-5.37
ADediting_590298	chr17_1780444_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-10400-3p	chr17	1780444	1780450	7mer-m8	1780443	1780464	140	-20.37
ADediting_590298	chr17_1780444_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-1343-3p	chr17	1780441	1780447	7mer-m8	1780440	1780461	140	-20.74
ADediting_590298	chr17_1780444_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-4674	chr17	1780444	1780450	7mer-m8	1780443	1780463	147	-22.8
ADediting_590298	chr17_1780444_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-6783-3p	chr17	1780441	1780447	7mer-m8	1780440	1780461	151	-25.03
ADediting_590298	chr17_1780444_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-939-3p	chr17	1780441	1780448	8mer-1a	1780441	1780463	148	-23.24
ADediting_590299	chr17_1780454_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-1245a	chr17	1780452	1780458	7mer-m8	1780451	1780471	145	-18.36
ADediting_590301	chr17_1780496_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-3934-5p	chr17	1780492	1780498	7mer-m8	1780491	1780512	146	-19.51
ADediting_590301	chr17_1780496_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-552-3p	chr17	1780490	1780497	8mer-1a	1780490	1780510	143	-16.35
ADediting_590302	chr17_1780506_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-519a-2-5p	chr17	1780503	1780509	7mer-m8	1780502	1780524	142	-21.17
ADediting_590302	chr17_1780506_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-520b-5p	chr17	1780503	1780509	7mer-m8	1780502	1780524	142	-21.17
ADediting_590304	chr17_1780694_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-4284	chr17	1780691	1780697	7mer-m8	1780690	1780707	144	-12.71
ADediting_590305	chr17_1780698_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-2276-3p	chr17	1780697	1780703	7mer-m8	1780696	1780716	142	-15.05
ADediting_590306	chr17_1780707_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-1236-3p	chr17	1780704	1780710	7mer-m8	1780703	1780727	155	-24.13
ADediting_590308	chr17_1780733_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-1976	chr17	1780728	1780735	8mer-1a	1780728	1780748	149	-24.45
ADediting_590308	chr17_1780733_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-6747-3p	chr17	1780730	1780737	8mer-1a	1780730	1780752	149	-23.99
ADediting_590313	chr17_1780760_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-7151-3p	chr17	1780760	1780766	7mer-m8	1780759	1780779	140	-13.52
ADediting_590314	chr17_1780786_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-4735-5p	chr17	1780785	1780791	7mer-m8	1780784	1780805	140	-4.23
ADediting_590314	chr17_1780786_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-4775	chr17	1780786	1780792	7mer-m8	1780785	1780807	153	-7.86
ADediting_590315	chr17_1780790_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-4735-5p	chr17	1780785	1780791	7mer-m8	1780784	1780805	140	-4.23
ADediting_590315	chr17_1780790_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-4775	chr17	1780786	1780792	7mer-m8	1780785	1780807	153	-7.86
ADediting_590317	chr17_1780817_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-193b-5p	chr17	1780813	1780819	7mer-m8	1780812	1780833	142	-17.8
ADediting_590318	chr17_1780818_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-193b-5p	chr17	1780813	1780819	7mer-m8	1780812	1780833	142	-17.8
ADediting_590320	chr17_1780825_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-3152-3p	chr17	1780824	1780830	7mer-m8	1780823	1780843	145	-18.08
ADediting_590321	chr17_1780827_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-3152-3p	chr17	1780824	1780830	7mer-m8	1780823	1780843	145	-18.08
ADediting_590322	chr17_1780851_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-378a-5p	chr17	1780848	1780854	7mer-m8	1780847	1780868	153	-23.97
ADediting_590323	chr17_1780868_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-6747-3p	chr17	1780866	1780872	7mer-m8	1780865	1780886	150	-22.04
ADediting_590324	chr17_1780894_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-10399-5p	chr17	1780893	1780899	7mer-m8	1780892	1780913	148	-12.98
ADediting_590324	chr17_1780894_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-5089-5p	chr17	1780889	1780895	7mer-m8	1780888	1780908	145	-13.6
ADediting_590324	chr17_1780894_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-6504-3p	chr17	1780893	1780899	7mer-m8	1780892	1780913	148	-14.35
ADediting_590325	chr17_1780895_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-10399-5p	chr17	1780893	1780899	7mer-m8	1780892	1780913	148	-12.98
ADediting_590325	chr17_1780895_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-6504-3p	chr17	1780893	1780899	7mer-m8	1780892	1780913	148	-14.35
ADediting_590325	chr17_1780895_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-7151-3p	chr17	1780894	1780901	8mer-1a	1780894	1780914	152	-18.3
ADediting_590327	chr17_1780903_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-6807-5p	chr17	1780902	1780909	8mer-1a	1780902	1780923	145	-21.85
ADediting_590328	chr17_1780962_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-6765-3p	chr17	1780957	1780964	8mer-1a	1780957	1780978	152	-25.29
ADediting_590328	chr17_1780962_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-7851-3p	chr17	1780959	1780965	7mer-m8	1780958	1780981	151	-24.05
ADediting_590328	chr17_1780962_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-939-3p	chr17	1780960	1780966	7mer-m8	1780959	1780979	140	-16.8
ADediting_590331	chr17_1780992_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-4284	chr17	1780989	1780995	7mer-m8	1780988	1781005	151	-17.62
ADediting_590333	chr17_1781012_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-1343-3p	chr17	1781009	1781015	7mer-m8	1781008	1781031	143	-22.21
ADediting_590333	chr17_1781012_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-6742-3p	chr17	1781009	1781016	8mer-1a	1781009	1781028	145	-14.93
ADediting_590333	chr17_1781012_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-6783-3p	chr17	1781009	1781015	7mer-m8	1781008	1781028	146	-16.81
ADediting_590336	chr17_1781031_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-1976	chr17	1781026	1781033	8mer-1a	1781026	1781046	149	-21.37
ADediting_590336	chr17_1781031_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-6747-3p	chr17	1781028	1781035	8mer-1a	1781028	1781049	150	-24.11
ADediting_590337	chr17_1781048_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-562	chr17	1781045	1781051	7mer-m8	1781044	1781063	150	-12.74
ADediting_590337	chr17_1781048_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-5697	chr17	1781044	1781050	7mer-m8	1781043	1781065	149	-18.33
ADediting_590338	chr17_1781052_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-5089-5p	chr17	1781052	1781058	7mer-m8	1781051	1781069	146	-13.74
ADediting_590338	chr17_1781052_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-6506-5p	chr17	1781051	1781057	7mer-m8	1781050	1781072	144	-14.79
ADediting_590339	chr17_1781057_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-10399-5p	chr17	1781056	1781062	7mer-m8	1781055	1781074	145	-11.45
ADediting_590339	chr17_1781057_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-5089-5p	chr17	1781052	1781058	7mer-m8	1781051	1781069	146	-13.74
ADediting_590339	chr17_1781057_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-6504-3p	chr17	1781056	1781062	7mer-m8	1781055	1781079	144	-13.75
ADediting_590340	chr17_1781058_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-10399-5p	chr17	1781056	1781062	7mer-m8	1781055	1781074	145	-11.45
ADediting_590340	chr17_1781058_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-6504-3p	chr17	1781056	1781062	7mer-m8	1781055	1781079	144	-13.75
ADediting_590341	chr17_1781064_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-552-3p	chr17	1781058	1781065	8mer-1a	1781058	1781078	144	-14.65
ADediting_590342	chr17_1781080_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-4794	chr17	1781079	1781085	7mer-m8	1781078	1781099	140	-12.3
ADediting_590342	chr17_1781080_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-664a-5p	chr17	1781079	1781085	7mer-m8	1781078	1781101	145	-15.17
ADediting_590343	chr17_1781084_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-4794	chr17	1781079	1781085	7mer-m8	1781078	1781099	140	-12.3
ADediting_590343	chr17_1781084_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-664a-5p	chr17	1781079	1781085	7mer-m8	1781078	1781101	145	-15.17
ADediting_590349	chr17_1781109_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-3170	chr17	1781109	1781115	7mer-m8	1781108	1781129	140	-13.8
ADediting_590349	chr17_1781109_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-4426	chr17	1781105	1781111	7mer-m8	1781104	1781120	140	-11.43
ADediting_590349	chr17_1781109_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-4647	chr17	1781105	1781111	7mer-m8	1781104	1781126	152	-12.11
ADediting_590349	chr17_1781109_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-4662b	chr17	1781105	1781111	7mer-m8	1781104	1781124	141	-12.48
ADediting_590349	chr17_1781109_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-6855-5p	chr17	1781109	1781115	7mer-m8	1781108	1781132	145	-17.8
ADediting_590349	chr17_1781109_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-6890-5p	chr17	1781108	1781114	7mer-m8	1781107	1781127	142	-13.42
ADediting_590350	chr17_1781114_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-193b-5p	chr17	1781109	1781116	8mer-1a	1781109	1781130	142	-15.74
ADediting_590350	chr17_1781114_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-3170	chr17	1781109	1781115	7mer-m8	1781108	1781129	140	-13.8
ADediting_590350	chr17_1781114_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-6855-5p	chr17	1781109	1781115	7mer-m8	1781108	1781132	145	-17.8
ADediting_590351	chr17_1781115_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-193b-5p	chr17	1781109	1781116	8mer-1a	1781109	1781130	142	-15.74
ADediting_590353	chr17_1781122_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-4716-5p	chr17	1781119	1781125	7mer-m8	1781118	1781139	140	-11.3
ADediting_590353	chr17_1781122_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-4781-3p	chr17	1781121	1781127	7mer-m8	1781120	1781138	144	-13.86
ADediting_590354	chr17_1781124_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-4716-5p	chr17	1781119	1781125	7mer-m8	1781118	1781139	140	-11.3
ADediting_590354	chr17_1781124_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-4781-3p	chr17	1781121	1781127	7mer-m8	1781120	1781138	144	-13.86
ADediting_590355	chr17_1781125_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-4435	chr17	1781124	1781131	8mer-1a	1781124	1781144	146	-17.76
ADediting_590355	chr17_1781125_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-4781-3p	chr17	1781121	1781127	7mer-m8	1781120	1781138	144	-13.86
ADediting_590356	chr17_1781134_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-3663-5p	chr17	1781133	1781139	7mer-m8	1781132	1781148	141	-19.69
ADediting_590356	chr17_1781134_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-6131	chr17	1781132	1781138	7mer-m8	1781131	1781149	140	-17.94
ADediting_590357	chr17_1781137_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-3663-5p	chr17	1781133	1781139	7mer-m8	1781132	1781148	141	-19.69
ADediting_590357	chr17_1781137_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-6131	chr17	1781132	1781138	7mer-m8	1781131	1781149	140	-17.94
ADediting_590360	chr17_1781148_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-489-3p	chr17	1781148	1781154	7mer-m8	1781147	1781169	154	-14.62
ADediting_590361	chr17_1781158_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-125a-3p	chr17	1781153	1781160	8mer-1a	1781153	1781174	140	-15.95
ADediting_590364	chr17_1781193_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-10399-5p	chr17	1781192	1781198	7mer-m8	1781191	1781212	144	-10.39
ADediting_590364	chr17_1781193_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-5089-5p	chr17	1781188	1781194	7mer-m8	1781187	1781209	148	-14.13
ADediting_590364	chr17_1781193_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-6504-3p	chr17	1781192	1781198	7mer-m8	1781191	1781212	148	-14.48
ADediting_590365	chr17_1781194_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-10399-5p	chr17	1781192	1781198	7mer-m8	1781191	1781212	144	-10.39
ADediting_590365	chr17_1781194_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-6504-3p	chr17	1781192	1781198	7mer-m8	1781191	1781212	148	-14.48
ADediting_590365	chr17_1781194_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-7151-3p	chr17	1781193	1781200	8mer-1a	1781193	1781213	144	-16.51
ADediting_590366	chr17_1781202_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-6807-5p	chr17	1781202	1781208	7mer-m8	1781201	1781223	144	-22.54
ADediting_590368	chr17_1781216_-	ENSG00000186532.12	ENST00000305513.12	SMYD4-201	hsa-miR-4435	chr17	1781216	1781222	7mer-m8	1781215	1781236	140	-16.22
ADediting_590372	chr17_1781792_-	ENSG00000186532.12	ENST00000491788.1	SMYD4-203	hsa-miR-1285-3p	chr17	1781791	1781797	7mer-m8	1781790	1781811	143	-15.47
ADediting_590372	chr17_1781792_-	ENSG00000186532.12	ENST00000491788.1	SMYD4-203	hsa-miR-1343-3p	chr17	1781789	1781795	7mer-m8	1781788	1781809	140	-20.24
ADediting_590372	chr17_1781792_-	ENSG00000186532.12	ENST00000491788.1	SMYD4-203	hsa-miR-3187-5p	chr17	1781791	1781797	7mer-m8	1781790	1781813	154	-32.13
ADediting_590372	chr17_1781792_-	ENSG00000186532.12	ENST00000491788.1	SMYD4-203	hsa-miR-5189-5p	chr17	1781791	1781797	7mer-m8	1781790	1781810	149	-29.42
ADediting_590372	chr17_1781792_-	ENSG00000186532.12	ENST00000491788.1	SMYD4-203	hsa-miR-612	chr17	1781791	1781797	7mer-m8	1781790	1781816	155	-20.97
ADediting_590372	chr17_1781792_-	ENSG00000186532.12	ENST00000491788.1	SMYD4-203	hsa-miR-6783-3p	chr17	1781789	1781795	7mer-m8	1781788	1781809	149	-21.47
ADediting_590372	chr17_1781792_-	ENSG00000186532.12	ENST00000491788.1	SMYD4-203	hsa-miR-6860	chr17	1781791	1781797	7mer-m8	1781790	1781808	151	-21.15
ADediting_590372	chr17_1781792_-	ENSG00000186532.12	ENST00000491788.1	SMYD4-203	hsa-miR-939-3p	chr17	1781789	1781796	8mer-1a	1781789	1781809	149	-20.93
ADediting_590373	chr17_1781804_-	ENSG00000186532.12	ENST00000491788.1	SMYD4-203	hsa-miR-10399-5p	chr17	1781803	1781809	7mer-m8	1781802	1781822	140	-10.39
ADediting_590373	chr17_1781804_-	ENSG00000186532.12	ENST00000491788.1	SMYD4-203	hsa-miR-378j	chr17	1781799	1781805	7mer-m8	1781798	1781816	142	-12.72
ADediting_590373	chr17_1781804_-	ENSG00000186532.12	ENST00000491788.1	SMYD4-203	hsa-miR-6504-3p	chr17	1781803	1781809	7mer-m8	1781802	1781821	140	-7.96
ADediting_590373	chr17_1781804_-	ENSG00000186532.12	ENST00000491788.1	SMYD4-203	hsa-miR-6839-5p	chr17	1781799	1781805	7mer-m8	1781798	1781819	148	-15.51
ADediting_590376	chr17_1782427_-	ENSG00000186532.12	ENST00000491788.1	SMYD4-203	hsa-miR-6808-3p	chr17	1782427	1782433	7mer-m8	1782426	1782445	144	-17.31

RNA A-to-I editing in lncRNA gained miRNA binding sites.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

ADediting_1535954

chr14_101045974_+

ENSG00000186532.12

ENST00000305513.12

SMYD4-201

hsa-miR-381-3p

chr17

1780759

1780765

7mer-m8

1780758

1780779

147

-15.4

ADediting_1596844

chr1_162342605_+

ENSG00000186532.12

ENST00000305513.12

SMYD4-201

hsa-miR-556-3p

chr17

1780418

1780424

7mer-m8

1780417

1780437

142

-12.27

ADediting_843620

chr2_207754818_+

ENSG00000186532.12

ENST00000305513.12

SMYD4-201

hsa-miR-4775

chr17

1779563

1779570

8mer-1a

1779563

1779587

150

-11.05

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

ADeditom_ID

Position

ENSG

ENST

Transcript name

miRNA ID

Chromosome

Targt

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

ADediting_843620

chr2_207754818_+

ENSG00000186532.12

ENST00000305513.12

SMYD4-201

hsa-miR-4775

chr17

1780786

1780792

7mer-m8

1780785

1780807

153

-7.86

Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for SMYD4

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000305513.12	protein_coding
ENST00000491788.1	protein_coding

RNA A-to-I editing in miRNA.

ADeditom_ID

ENST

mir_ID

Editing_Information

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

RNA A-to-I editing in mRNA.

ADeditom_ID	ENST	Editing_Information	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
ADediting_590266	ENST00000305513.12	chr17_1779971_-	3919	-1593.10	-1594.40	-1670.10
ADediting_590267	ENST00000305513.12	chr17_1780248_-	3642	-1594.40	-1594.40	-1670.10
ADediting_590270	ENST00000305513.12	chr17_1780270_-	3620	-1595.90	-1594.40	-1670.10
ADediting_590271	ENST00000305513.12	chr17_1780278_-	3612	-1596.50	-1594.40	-1670.10
ADediting_590274	ENST00000305513.12	chr17_1780285_-	3605	-1594.40	-1594.40	-1670.10
ADediting_590275	ENST00000305513.12	chr17_1780286_-	3604	-1594.50	-1594.40	-1670.10
ADediting_590277	ENST00000305513.12	chr17_1780290_-	3600	-1599.00	-1594.40	-1670.10
ADediting_590279	ENST00000305513.12	chr17_1780294_-	3596	-1593.70	-1594.40	-1670.10
ADediting_590283	ENST00000305513.12	chr17_1780307_-	3583	-1594.40	-1594.40	-1670.10
ADediting_590284	ENST00000305513.12	chr17_1780315_-	3575	-1593.70	-1594.40	-1670.10
ADediting_590285	ENST00000305513.12	chr17_1780320_-	3570	-1594.70	-1594.40	-1670.10
ADediting_590286	ENST00000305513.12	chr17_1780326_-	3564	-1593.10	-1594.40	-1670.10
ADediting_590287	ENST00000305513.12	chr17_1780330_-	3560	-1593.50	-1594.40	-1670.10
ADediting_590288	ENST00000305513.12	chr17_1780335_-	3555	-1595.70	-1594.40	-1670.10
ADediting_1545467	ENST00000305513.12	chr17_1780343_-	3547	-1599.30	-1594.40	-1670.10
ADediting_590289	ENST00000305513.12	chr17_1780353_-	3537	-1597.40	-1594.40	-1670.10
ADediting_590290	ENST00000305513.12	chr17_1780363_-	3527	-1595.00	-1594.40	-1670.10
ADediting_590292	ENST00000305513.12	chr17_1780371_-	3519	-1596.30	-1594.40	-1670.10
ADediting_590293	ENST00000305513.12	chr17_1780416_-	3474	-1596.30	-1594.40	-1670.10
ADediting_590294	ENST00000305513.12	chr17_1780433_-	3457	-1594.80	-1594.40	-1670.10
ADediting_590295	ENST00000305513.12	chr17_1780434_-	3456	-1594.80	-1594.40	-1670.10
ADediting_590296	ENST00000305513.12	chr17_1780435_-	3455	-1594.40	-1594.40	-1670.10
ADediting_590297	ENST00000305513.12	chr17_1780436_-	3454	-1594.40	-1594.40	-1670.10
ADediting_590298	ENST00000305513.12	chr17_1780444_-	3446	-1593.70	-1594.40	-1670.10
ADediting_590299	ENST00000305513.12	chr17_1780454_-	3436	-1596.20	-1594.40	-1670.10
ADediting_590300	ENST00000305513.12	chr17_1780475_-	3415	-1599.60	-1594.40	-1670.10
ADediting_590301	ENST00000305513.12	chr17_1780496_-	3394	-1594.00	-1594.40	-1670.10
ADediting_590302	ENST00000305513.12	chr17_1780506_-	3384	-1595.30	-1594.40	-1670.10
ADediting_590303	ENST00000305513.12	chr17_1780674_-	3216	-1596.20	-1594.40	-1670.10
ADediting_1545473	ENST00000305513.12	chr17_1780687_-	3203	-1594.40	-1594.40	-1670.10
ADediting_590304	ENST00000305513.12	chr17_1780694_-	3196	-1595.70	-1594.40	-1670.10
ADediting_590305	ENST00000305513.12	chr17_1780698_-	3192	-1593.70	-1594.40	-1670.10
ADediting_590306	ENST00000305513.12	chr17_1780707_-	3183	-1597.40	-1594.40	-1670.10
ADediting_590307	ENST00000305513.12	chr17_1780718_-	3172	-1595.40	-1594.40	-1670.10
ADediting_590308	ENST00000305513.12	chr17_1780733_-	3157	-1595.31	-1594.40	-1670.10
ADediting_590309	ENST00000305513.12	chr17_1780743_-	3147	-1595.70	-1594.40	-1670.10
ADediting_590310	ENST00000305513.12	chr17_1780750_-	3140	-1598.30	-1594.40	-1670.10
ADediting_590311	ENST00000305513.12	chr17_1780754_-	3136	-1595.91	-1594.40	-1670.10
ADediting_590312	ENST00000305513.12	chr17_1780756_-	3134	-1594.90	-1594.40	-1670.10
ADediting_590313	ENST00000305513.12	chr17_1780760_-	3130	-1595.71	-1594.40	-1670.10
ADediting_590314	ENST00000305513.12	chr17_1780786_-	3104	-1595.20	-1594.40	-1670.10
ADediting_590315	ENST00000305513.12	chr17_1780790_-	3100	-1594.40	-1594.40	-1670.10
ADediting_590316	ENST00000305513.12	chr17_1780797_-	3093	-1594.40	-1594.40	-1670.10
ADediting_590317	ENST00000305513.12	chr17_1780817_-	3073	-1594.40	-1594.40	-1670.10
ADediting_590318	ENST00000305513.12	chr17_1780818_-	3072	-1597.70	-1594.40	-1670.10
ADediting_590319	ENST00000305513.12	chr17_1780819_-	3071	-1596.20	-1594.40	-1670.10
ADediting_590320	ENST00000305513.12	chr17_1780825_-	3065	-1595.30	-1594.40	-1670.10
ADediting_590321	ENST00000305513.12	chr17_1780827_-	3063	-1595.50	-1594.40	-1670.10
ADediting_1545474	ENST00000305513.12	chr17_1780828_-	3062	-1596.00	-1594.40	-1670.10
ADediting_590322	ENST00000305513.12	chr17_1780851_-	3039	-1594.80	-1594.40	-1670.10
ADediting_590323	ENST00000305513.12	chr17_1780868_-	3022	-1595.51	-1594.40	-1670.10
ADediting_590324	ENST00000305513.12	chr17_1780894_-	2996	-1594.40	-1594.40	-1670.10
ADediting_590325	ENST00000305513.12	chr17_1780895_-	2995	-1594.40	-1594.40	-1670.10
ADediting_590326	ENST00000305513.12	chr17_1780902_-	2988	-1596.50	-1594.40	-1670.10
ADediting_590327	ENST00000305513.12	chr17_1780903_-	2987	-1596.50	-1594.40	-1670.10
ADediting_590328	ENST00000305513.12	chr17_1780962_-	2928	-1595.30	-1594.40	-1670.10
ADediting_590329	ENST00000305513.12	chr17_1780972_-	2918	-1593.70	-1594.40	-1670.10
ADediting_590330	ENST00000305513.12	chr17_1780985_-	2905	-1594.40	-1594.40	-1670.10
ADediting_590331	ENST00000305513.12	chr17_1780992_-	2898	-1597.10	-1594.40	-1670.10
ADediting_590332	ENST00000305513.12	chr17_1780996_-	2894	-1593.70	-1594.40	-1670.10
ADediting_590333	ENST00000305513.12	chr17_1781012_-	2878	-1593.70	-1594.40	-1670.10
ADediting_590334	ENST00000305513.12	chr17_1781016_-	2874	-1595.90	-1594.40	-1670.10
ADediting_1545475	ENST00000305513.12	chr17_1781017_-	2873	-1594.40	-1594.40	-1670.10
ADediting_590335	ENST00000305513.12	chr17_1781025_-	2865	-1596.80	-1594.40	-1670.10
ADediting_590336	ENST00000305513.12	chr17_1781031_-	2859	-1594.80	-1594.40	-1670.10
ADediting_590337	ENST00000305513.12	chr17_1781048_-	2842	-1595.40	-1594.40	-1670.10
ADediting_590338	ENST00000305513.12	chr17_1781052_-	2838	-1598.40	-1594.40	-1670.10
ADediting_590339	ENST00000305513.12	chr17_1781057_-	2833	-1596.00	-1594.40	-1670.10
ADediting_590340	ENST00000305513.12	chr17_1781058_-	2832	-1594.40	-1594.40	-1670.10
ADediting_590341	ENST00000305513.12	chr17_1781064_-	2826	-1595.40	-1594.40	-1670.10
ADediting_590342	ENST00000305513.12	chr17_1781080_-	2810	-1595.70	-1594.40	-1670.10
ADediting_590343	ENST00000305513.12	chr17_1781084_-	2806	-1599.30	-1594.40	-1670.10
ADediting_1545476	ENST00000305513.12	chr17_1781091_-	2799	-1594.40	-1594.40	-1670.10
ADediting_590344	ENST00000305513.12	chr17_1781094_-	2796	-1594.50	-1594.40	-1670.10
ADediting_590345	ENST00000305513.12	chr17_1781096_-	2794	-1595.40	-1594.40	-1670.10
ADediting_590346	ENST00000305513.12	chr17_1781097_-	2793	-1596.30	-1594.40	-1670.10
ADediting_590347	ENST00000305513.12	chr17_1781098_-	2792	-1595.90	-1594.40	-1670.10
ADediting_590348	ENST00000305513.12	chr17_1781103_-	2787	-1596.60	-1594.40	-1670.10
ADediting_590349	ENST00000305513.12	chr17_1781109_-	2781	-1594.40	-1594.40	-1670.10
ADediting_590350	ENST00000305513.12	chr17_1781114_-	2776	-1596.60	-1594.40	-1670.10
ADediting_590351	ENST00000305513.12	chr17_1781115_-	2775	-1594.20	-1594.40	-1670.10
ADediting_590352	ENST00000305513.12	chr17_1781116_-	2774	-1596.00	-1594.40	-1670.10
ADediting_590353	ENST00000305513.12	chr17_1781122_-	2768	-1595.20	-1594.40	-1670.10
ADediting_590354	ENST00000305513.12	chr17_1781124_-	2766	-1596.50	-1594.40	-1670.10
ADediting_590355	ENST00000305513.12	chr17_1781125_-	2765	-1594.40	-1594.40	-1670.10
ADediting_590356	ENST00000305513.12	chr17_1781134_-	2756	-1593.70	-1594.40	-1670.10
ADediting_590357	ENST00000305513.12	chr17_1781137_-	2753	-1594.50	-1594.40	-1670.10
ADediting_590358	ENST00000305513.12	chr17_1781139_-	2751	-1594.30	-1594.40	-1670.10
ADediting_590359	ENST00000305513.12	chr17_1781140_-	2750	-1593.30	-1594.40	-1670.10
ADediting_590360	ENST00000305513.12	chr17_1781148_-	2742	-1593.70	-1594.40	-1670.10
ADediting_590361	ENST00000305513.12	chr17_1781158_-	2732	-1596.00	-1594.40	-1670.10
ADediting_590362	ENST00000305513.12	chr17_1781171_-	2719	-1597.20	-1594.40	-1670.10
ADediting_590363	ENST00000305513.12	chr17_1781172_-	2718	-1594.70	-1594.40	-1670.10
ADediting_1545477	ENST00000305513.12	chr17_1781185_-	2705	-1594.40	-1594.40	-1670.10
ADediting_590364	ENST00000305513.12	chr17_1781193_-	2697	-1595.80	-1594.40	-1670.10
ADediting_590365	ENST00000305513.12	chr17_1781194_-	2696	-1596.60	-1594.40	-1670.10
ADediting_590366	ENST00000305513.12	chr17_1781202_-	2688	-1594.00	-1594.40	-1670.10
ADediting_590367	ENST00000305513.12	chr17_1781212_-	2678	-1596.90	-1594.40	-1670.10
ADediting_590368	ENST00000305513.12	chr17_1781216_-	2674	-1594.40	-1594.40	-1670.10
ADediting_590370	ENST00000491788.1	chr17_1781764_-	2944	-1108.10	-1107.90	-1129.20
ADediting_590371	ENST00000491788.1	chr17_1781765_-	2943	-1108.60	-1107.90	-1129.20
ADediting_590372	ENST00000491788.1	chr17_1781792_-	2916	-1111.20	-1107.90	-1129.20
ADediting_590373	ENST00000491788.1	chr17_1781804_-	2904	-1108.00	-1107.90	-1129.20
ADediting_590374	ENST00000491788.1	chr17_1781818_-	2890	-1110.10	-1107.90	-1129.20
ADediting_590376	ENST00000491788.1	chr17_1782427_-	2281	-1111.60	-1107.90	-1129.20
ADediting_590377	ENST00000491788.1	chr17_1782443_-	2265	-1114.60	-1107.90	-1129.20
ADediting_590392	ENST00000491788.1	chr17_1782834_-	1874	-1108.70	-1107.90	-1129.20
ADediting_590393	ENST00000491788.1	chr17_1782835_-	1873	-1108.50	-1107.90	-1129.20

RNA A-to-I editing in lncRNA.

ADeditom_ID

ENST

Editing_Information

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for SMYD4

Correlation between ADAR gene expression and RNA editing frequency

Tissue	ADeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
CER	ADediting_590270	chr17_1780270_-	0.00287478291245589	0.241783855309861	1.55074136807059e-06	0.380609206342192	0.132216281071042	0.123479046672157
TCX	ADediting_590274	chr17_1780285_-	0.0409600593550222	0.167109077923483	0.00011193814243555	0.310202143291762	0.226878432961767	-0.0992551024885115
TCX	ADediting_590298	chr17_1780444_-	0.00112143301958202	0.263512812248039	9.59120428320518e-10	0.473269685370135	0.0417133023337899	-0.166499253001257
TCX	ADediting_590303	chr17_1780674_-	0.436654731585881	0.0639816882698891	1.75130622705923e-05	0.34282218540732	0.666298352022419	-0.035495935482389
TCX	ADediting_590310	chr17_1780750_-	0.276407479034556	0.0894395011995423	1.02954552426971e-05	0.351524797399508	0.308696978866822	-0.0836701783774317
DLPFC	ADediting_590370	chr17_1781764_-	0.00731936542779967	0.152052287781323	0.106046635740406	0.0919720500444969	3.65268768008823e-09	0.327111224417987
DLPFC	ADediting_590371	chr17_1781765_-	0.176930647758234	0.0768869981974271	0.832416796125888	0.0120665491865326	6.16901432255213e-08	0.301517602488659

Correlation between ADAR gene expression and this gene's expression

Tissue	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
DLPFC	2.20330684628995e-27	0.563581201801419	2.0909320268893e-16	0.443985644019485	1.45753722774325e-43	0.680883453982269
AC	3.71839683504788e-67	0.837896707893921	1.07251975358226e-42	0.728907189250011	8.49141655313454e-25	0.589589219062003
PCC	2.39083740811438e-28	0.690112572201256	4.55249262401491e-25	0.657999324527991	2.32873759917246e-10	0.438082124530763
CER	2.69751343284158e-33	0.790302874072065	6.91533528773607e-15	0.580498161538252	0.315441111978003	0.0825160775161943
TCX	3.22431613593152e-30	0.766172680925686	4.69022797936774e-09	0.455571382394791	1.02361279894343e-07	0.41801065382792
FP	1.18027030154945e-30	0.727901038295383	4.90868189656011e-18	0.589430272421433	3.49143893712867e-11	0.470328530914393
IFG	0.00105180102872937	0.615685117297788	0.00010432154810702	0.698120893349229	0.00563099290903278	0.537107382402173
PG	2.00025355949348e-35	0.754039097016019	3.42706520210839e-22	0.632684742894048	0.100508092700568	0.120799204703248
STG	4.11966220034541e-10	0.616966129356738	2.62448332833584e-06	0.487059122208627	0.000200672667293346	0.394977390199053

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Relation with AD stages for SMYD4

Correlation between AD stages and RNA editing frequency

Tissue	ADeditomID	position	P-val	Coeff.
TCX	ADediting_590341	chr17_1781064_-	0.00105289135150913	0.313835105005716

Correlation between AD stages and this gene's expression

Tissue	P-val	Coeff.
TCX	4.34197437262979e-09	0.532151315200256

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RelatedDrugs for SMYD4

Approved drugs targeting this gene.
(DrugBank Version 5.1.0 2018-04-02)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for SMYD4

Diseases associated with this gene.
(DisGeNet 4.0)

Gene	Disease ID	Disease name	# pubmeds	Source
SMYD4	C0025149	Medulloblastoma	1	CTD_human
SMYD4	C0205833	Medullomyoblastoma	1	CTD_human
SMYD4	C0278510	Childhood Medulloblastoma	1	CTD_human
SMYD4	C0278876	Adult Medulloblastoma	1	CTD_human
SMYD4	C0751291	Desmoplastic Medulloblastoma	1	CTD_human
SMYD4	C1275668	Melanotic medulloblastoma	1	CTD_human

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Gene summary for SMYD4

RNA A-to-I events for SMYD4

RNA editing positional annotations for SMYD4 using Annovar

RNA A-to-I editing events in the alternative splicing sites for SMYD4

Differntial gene expression between RNA A-to-I edited versus non-edited samples for SMYD4

Protein coding region RNA A-to-I editings for SMYD4

The effects of the RNA editing to the miRNA binding sites for SMYD4

The effects of the RNA editing to the stability of the RNA structures for SMYD4

Relation with ADAR for SMYD4

Relation with AD stages for SMYD4

RelatedDrugs for SMYD4

RelatedDiseases for SMYD4

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited versus non-edited samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with AD stages
	Related drugs with this gene
	Related diseases with this gene