ADeditome Logo

Home

Download

Statistics

Landscape

Help

Contact
Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited versus non-edited samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with AD stages

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene


Gene summary for GLB1L3

check button Gene summary
Gene informationGene symbol

GLB1L3

Gene ID

112937

Gene namegalactosidase beta 1 like 3
Synonyms-
Cytomap

11q25

Type of geneprotein-coding
Descriptionbeta-galactosidase-1-like protein 3
Modification date20200313
UniProtAcc

Q8NCI6,

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID

Top

RNA A-to-I events for GLB1L3

check buttonRNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure.
* This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage).
all structure

check button RNA editing frequencies across three data sets.
boxplot

check buttonThe number of RNA A-to-I editing events in different types of transcripts (# event, percentage).
boxplot

check button RNA A-to-I editing events in AD.
ADediting_243889(134283080, +), ADediting_243890(134283243, +), ADediting_243891(134283338, +), ADediting_243892(134283447, +), ADediting_243893(134284464, +), ADediting_243894(134284470, +), ADediting_243895(134284472, +), ADediting_243896(134284473, +), ADediting_243897(134284499, +), ADediting_243898(134284508, +), ADediting_243899(134284518, +), ADediting_243900(134284527, +), ADediting_243901(134284532, +), ADediting_243902(134284541, +), ADediting_243903(134284542, +), ADediting_243904(134284544, +), ADediting_243905(134284565, +), ADediting_243906(134284566, +), ADediting_243907(134284568, +), ADediting_243908(134284569, +), ADediting_243909(134284571, +), ADediting_243910(134284579, +), ADediting_243911(134284582, +), ADediting_243912(134284622, +), ADediting_243913(134284631, +), ADediting_243914(134284636, +), ADediting_243915(134284641, +), ADediting_243916(134284644, +), ADediting_243917(134284649, +), ADediting_243918(134284650, +), ADediting_243919(134284661, +), ADediting_243920(134284665, +), ADediting_243921(134284668, +), ADediting_243922(134284679, +), ADediting_243923(134284684, +), ADediting_243924(134284692, +), ADediting_243925(134284699, +), ADediting_243926(134284984, +), ADediting_243927(134285046, +), ADediting_243928(134285104, +), ADediting_243929(134285135, +), ADediting_243930(134285190, +), ADediting_243931(134285202, +), ADediting_243932(134285522, +), ADediting_243933(134285530, +), ADediting_243934(134285531, +), ADediting_243935(134285552, +), ADediting_243936(134285553, +), ADediting_243937(134285554, +), ADediting_243938(134285582, +), ADediting_243939(134285584, +), ADediting_243940(134285585, +), ADediting_243941(134285600, +), ADediting_243942(134285604, +), ADediting_243943(134285608, +), ADediting_243944(134285615, +), ADediting_243945(134285616, +), ADediting_243946(134285630, +), ADediting_243947(134285661, +), ADediting_243948(134285668, +), ADediting_243949(134285671, +), ADediting_243950(134285679, +), ADediting_243951(134285683, +), ADediting_243952(134285684, +), ADediting_243953(134285713, +), ADediting_243954(134285737, +), ADediting_243955(134285742, +), ADediting_243956(134285754, +), ADediting_243957(134285759, +), ADediting_243958(134285995, +), ADediting_243959(134286009, +), ADediting_243960(134286013, +), ADediting_243961(134286026, +), ADediting_243962(134286038, +), ADediting_243963(134286048, +), ADediting_243964(134286054, +), ADediting_243965(134286089, +), ADediting_243966(134286092, +), ADediting_243967(134286109, +), ADediting_243968(134286124, +), ADediting_243969(134286129, +), ADediting_243970(134286130, +), ADediting_243971(134286143, +), ADediting_243972(134286170, +), ADediting_243973(134286171, +), ADediting_243974(134286183, +), ADediting_243975(134286189, +), ADediting_243976(134286522, +), ADediting_243977(134286697, +), ADediting_243978(134286759, +), ADediting_243979(134286899, +), ADediting_243980(134286905, +), ADediting_243981(134286906, +), ADediting_243982(134286911, +), ADediting_243983(134287040, +), ADediting_243984(134287073, +), ADediting_243985(134287076, +), ADediting_243986(134287081, +), ADediting_243987(134287082, +), ADediting_243988(134287110, +), ADediting_243989(134287126, +), ADediting_243990(134287145, +), ADediting_243991(134287149, +), ADediting_243992(134290358, +), ADediting_243993(134290363, +), ADediting_243994(134290446, +), ADediting_243995(134290452, +), ADediting_243996(134290466, +), ADediting_243997(134290488, +), ADediting_243998(134290493, +), ADediting_243999(134290494, +), ADediting_244000(134290503, +), ADediting_244001(134291341, +), ADediting_244002(134291359, +), ADediting_244003(134291360, +), ADediting_244004(134291363, +), ADediting_244005(134291364, +), ADediting_244006(134291389, +), ADediting_244007(134291396, +), ADediting_244008(134291399, +), ADediting_244009(134291405, +), ADediting_244010(134291417, +), ADediting_244011(134291456, +), ADediting_244012(134291482, +), ADediting_244013(134291789, +), ADediting_244014(134291793, +), ADediting_244015(134291854, +), ADediting_244016(134291868, +), ADediting_244017(134291914, +), ADediting_244018(134318986, +), ADediting_244019(134319016, +), ADediting_244020(134319018, +), ADediting_244021(134319035, +), ADediting_244022(134319084, +), ADediting_244023(134319094, +), ADediting_244024(134319139, +), ADediting_244025(134319161, +), ADediting_244026(134319219, +), ADediting_1526408(134285736, +),

Top

RNA editing positional annotations for GLB1L3 using Annovar

check button Protein coding RNA editing(s).
ADeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
ADeditome IDPositionVariant type
ADediting_243889chr11_134283080_+intronic
ADediting_243890chr11_134283243_+intronic
ADediting_243891chr11_134283338_+intronic
ADediting_243892chr11_134283447_+intronic
ADediting_243893chr11_134284464_+intronic
ADediting_243894chr11_134284470_+intronic
ADediting_243895chr11_134284472_+intronic
ADediting_243896chr11_134284473_+intronic
ADediting_243897chr11_134284499_+intronic
ADediting_243898chr11_134284508_+intronic
ADediting_243899chr11_134284518_+intronic
ADediting_243900chr11_134284527_+intronic
ADediting_243901chr11_134284532_+intronic
ADediting_243902chr11_134284541_+intronic
ADediting_243903chr11_134284542_+intronic
ADediting_243904chr11_134284544_+intronic
ADediting_243905chr11_134284565_+intronic
ADediting_243906chr11_134284566_+intronic
ADediting_243907chr11_134284568_+intronic
ADediting_243908chr11_134284569_+intronic
ADediting_243909chr11_134284571_+intronic
ADediting_243910chr11_134284579_+intronic
ADediting_243911chr11_134284582_+intronic
ADediting_243912chr11_134284622_+intronic
ADediting_243913chr11_134284631_+intronic
ADediting_243914chr11_134284636_+intronic
ADediting_243915chr11_134284641_+intronic
ADediting_243916chr11_134284644_+intronic
ADediting_243917chr11_134284649_+intronic
ADediting_243918chr11_134284650_+intronic
ADediting_243919chr11_134284661_+intronic
ADediting_243920chr11_134284665_+intronic
ADediting_243921chr11_134284668_+intronic
ADediting_243922chr11_134284679_+intronic
ADediting_243923chr11_134284684_+intronic
ADediting_243924chr11_134284692_+intronic
ADediting_243925chr11_134284699_+intronic
ADediting_243926chr11_134284984_+intronic
ADediting_243927chr11_134285046_+intronic
ADediting_243928chr11_134285104_+intronic
ADediting_243929chr11_134285135_+intronic
ADediting_243930chr11_134285190_+intronic
ADediting_243931chr11_134285202_+intronic
ADediting_243932chr11_134285522_+intronic
ADediting_243933chr11_134285530_+intronic
ADediting_243934chr11_134285531_+intronic
ADediting_243935chr11_134285552_+intronic
ADediting_243936chr11_134285553_+intronic
ADediting_243937chr11_134285554_+intronic
ADediting_243938chr11_134285582_+intronic
ADediting_243939chr11_134285584_+intronic
ADediting_243940chr11_134285585_+intronic
ADediting_243941chr11_134285600_+intronic
ADediting_243942chr11_134285604_+intronic
ADediting_243943chr11_134285608_+intronic
ADediting_243944chr11_134285615_+intronic
ADediting_243945chr11_134285616_+intronic
ADediting_243946chr11_134285630_+intronic
ADediting_243947chr11_134285661_+intronic
ADediting_243948chr11_134285668_+intronic
ADediting_243949chr11_134285671_+intronic
ADediting_243950chr11_134285679_+intronic
ADediting_243951chr11_134285683_+intronic
ADediting_243952chr11_134285684_+intronic
ADediting_243953chr11_134285713_+intronic
ADediting_243954chr11_134285737_+intronic
ADediting_243955chr11_134285742_+intronic
ADediting_243956chr11_134285754_+intronic
ADediting_243957chr11_134285759_+intronic
ADediting_243958chr11_134285995_+intronic
ADediting_243959chr11_134286009_+intronic
ADediting_243960chr11_134286013_+intronic
ADediting_243961chr11_134286026_+intronic
ADediting_243962chr11_134286038_+intronic
ADediting_243963chr11_134286048_+intronic
ADediting_243964chr11_134286054_+intronic
ADediting_243965chr11_134286089_+intronic
ADediting_243966chr11_134286092_+intronic
ADediting_243967chr11_134286109_+intronic
ADediting_243968chr11_134286124_+intronic
ADediting_243969chr11_134286129_+intronic
ADediting_243970chr11_134286130_+intronic
ADediting_243971chr11_134286143_+intronic
ADediting_243972chr11_134286170_+intronic
ADediting_243973chr11_134286171_+intronic
ADediting_243974chr11_134286183_+intronic
ADediting_243975chr11_134286189_+intronic
ADediting_243976chr11_134286522_+intronic
ADediting_243977chr11_134286697_+intronic
ADediting_243978chr11_134286759_+intronic
ADediting_243979chr11_134286899_+intronic
ADediting_243980chr11_134286905_+intronic
ADediting_243981chr11_134286906_+intronic
ADediting_243982chr11_134286911_+intronic
ADediting_243983chr11_134287040_+intronic
ADediting_243984chr11_134287073_+intronic
ADediting_243985chr11_134287076_+intronic
ADediting_243986chr11_134287081_+intronic
ADediting_243987chr11_134287082_+intronic
ADediting_243988chr11_134287110_+intronic
ADediting_243989chr11_134287126_+intronic
ADediting_243990chr11_134287145_+intronic
ADediting_243991chr11_134287149_+intronic
ADediting_243992chr11_134290358_+intronic
ADediting_243993chr11_134290363_+intronic
ADediting_243994chr11_134290446_+intronic
ADediting_243995chr11_134290452_+intronic
ADediting_243996chr11_134290466_+intronic
ADediting_243997chr11_134290488_+intronic
ADediting_243998chr11_134290493_+intronic
ADediting_243999chr11_134290494_+intronic
ADediting_244000chr11_134290503_+intronic
ADediting_244001chr11_134291341_+intronic
ADediting_244002chr11_134291359_+intronic
ADediting_244003chr11_134291360_+intronic
ADediting_244004chr11_134291363_+intronic
ADediting_244005chr11_134291364_+intronic
ADediting_244006chr11_134291389_+intronic
ADediting_244007chr11_134291396_+intronic
ADediting_244008chr11_134291399_+intronic
ADediting_244009chr11_134291405_+intronic
ADediting_244010chr11_134291417_+intronic
ADediting_244011chr11_134291456_+intronic
ADediting_244012chr11_134291482_+intronic
ADediting_244013chr11_134291789_+intronic
ADediting_244014chr11_134291793_+intronic
ADediting_244015chr11_134291854_+intronic
ADediting_244016chr11_134291868_+intronic
ADediting_244017chr11_134291914_+intronic
ADediting_244018chr11_134318986_+UTR3
ADediting_244019chr11_134319016_+UTR3
ADediting_244020chr11_134319018_+UTR3
ADediting_244021chr11_134319035_+UTR3
ADediting_244022chr11_134319084_+UTR3
ADediting_244023chr11_134319094_+UTR3
ADediting_244024chr11_134319139_+UTR3
ADediting_244025chr11_134319161_+UTR3
ADediting_244026chr11_134319219_+UTR3
ADediting_1526408chr11_134285736_+intronic

check button Repat-regional RNA editing(s).
ADeditome IDPositionRepeat familyRepeat sub familyRepeat name
ADediting_243889chr11_134283080_+SINEAluName=AluSx1
ADediting_243890chr11_134283243_+SINEAluName=AluSx1
ADediting_243891chr11_134283338_+SINEAluName=AluSx1
ADediting_243893chr11_134284464_+SINEAluName=AluSx
ADediting_243894chr11_134284470_+SINEAluName=AluSx
ADediting_243895chr11_134284472_+SINEAluName=AluSx
ADediting_243896chr11_134284473_+SINEAluName=AluSx
ADediting_243897chr11_134284499_+SINEAluName=AluSx
ADediting_243898chr11_134284508_+SINEAluName=AluSx
ADediting_243899chr11_134284518_+SINEAluName=AluSx
ADediting_243900chr11_134284527_+SINEAluName=AluSx
ADediting_243901chr11_134284532_+SINEAluName=AluSx
ADediting_243902chr11_134284541_+SINEAluName=AluSx
ADediting_243903chr11_134284542_+SINEAluName=AluSx
ADediting_243904chr11_134284544_+SINEAluName=AluSx
ADediting_243905chr11_134284565_+SINEAluName=AluSx
ADediting_243906chr11_134284566_+SINEAluName=AluSx
ADediting_243907chr11_134284568_+SINEAluName=AluSx
ADediting_243908chr11_134284569_+SINEAluName=AluSx
ADediting_243909chr11_134284571_+SINEAluName=AluSx
ADediting_243910chr11_134284579_+SINEAluName=AluSx
ADediting_243911chr11_134284582_+SINEAluName=AluSx
ADediting_243912chr11_134284622_+SINEAluName=AluSx
ADediting_243913chr11_134284631_+SINEAluName=AluSx
ADediting_243914chr11_134284636_+SINEAluName=AluSx
ADediting_243915chr11_134284641_+SINEAluName=AluSx
ADediting_243916chr11_134284644_+SINEAluName=AluSx
ADediting_243917chr11_134284649_+SINEAluName=AluSx
ADediting_243918chr11_134284650_+SINEAluName=AluSx
ADediting_243919chr11_134284661_+SINEAluName=AluSx
ADediting_243920chr11_134284665_+SINEAluName=AluSx
ADediting_243921chr11_134284668_+SINEAluName=AluSx
ADediting_243922chr11_134284679_+SINEAluName=AluSx
ADediting_243923chr11_134284684_+SINEAluName=AluSx
ADediting_243924chr11_134284692_+SINEAluName=AluSx
ADediting_243925chr11_134284699_+SINEAluName=AluSx
ADediting_243926chr11_134284984_+SINEAluName=AluY
ADediting_243927chr11_134285046_+SINEAluName=AluY
ADediting_243928chr11_134285104_+SINEAluName=AluY
ADediting_243929chr11_134285135_+SINEAluName=AluY
ADediting_243930chr11_134285190_+SINEAluName=AluY
ADediting_243931chr11_134285202_+SINEAluName=AluY
ADediting_243932chr11_134285522_+SINEAluName=AluJo
ADediting_243933chr11_134285530_+SINEAluName=AluJo
ADediting_243934chr11_134285531_+SINEAluName=AluJo
ADediting_243935chr11_134285552_+SINEAluName=AluJo
ADediting_243936chr11_134285553_+SINEAluName=AluJo
ADediting_243937chr11_134285554_+SINEAluName=AluJo
ADediting_243938chr11_134285582_+SINEAluName=AluJo
ADediting_243939chr11_134285584_+SINEAluName=AluJo
ADediting_243940chr11_134285585_+SINEAluName=AluJo
ADediting_243941chr11_134285600_+SINEAluName=AluJo
ADediting_243942chr11_134285604_+SINEAluName=AluJo
ADediting_243943chr11_134285608_+SINEAluName=AluJo
ADediting_243944chr11_134285615_+SINEAluName=AluJo
ADediting_243945chr11_134285616_+SINEAluName=AluJo
ADediting_243946chr11_134285630_+SINEAluName=AluJo
ADediting_243947chr11_134285661_+SINEAluName=AluJo
ADediting_243948chr11_134285668_+SINEAluName=AluJo
ADediting_243949chr11_134285671_+SINEAluName=AluJo
ADediting_243950chr11_134285679_+SINEAluName=AluJo
ADediting_243951chr11_134285683_+SINEAluName=AluJo
ADediting_243952chr11_134285684_+SINEAluName=AluJo
ADediting_243953chr11_134285713_+SINEAluName=AluJo
ADediting_243954chr11_134285737_+SINEAluName=AluJo
ADediting_243955chr11_134285742_+SINEAluName=AluJo
ADediting_243956chr11_134285754_+SINEAluName=AluJo
ADediting_243957chr11_134285759_+SINEAluName=AluJo
ADediting_243958chr11_134285995_+SINEAluName=AluSx1
ADediting_243959chr11_134286009_+SINEAluName=AluSx1
ADediting_243960chr11_134286013_+SINEAluName=AluSx1
ADediting_243961chr11_134286026_+SINEAluName=AluSx1
ADediting_243962chr11_134286038_+SINEAluName=AluSx1
ADediting_243963chr11_134286048_+SINEAluName=AluSx1
ADediting_243964chr11_134286054_+SINEAluName=AluSx1
ADediting_243965chr11_134286089_+SINEAluName=AluSx1
ADediting_243966chr11_134286092_+SINEAluName=AluSx1
ADediting_243967chr11_134286109_+SINEAluName=AluSx1
ADediting_243968chr11_134286124_+SINEAluName=AluSx1
ADediting_243969chr11_134286129_+SINEAluName=AluSx1
ADediting_243970chr11_134286130_+SINEAluName=AluSx1
ADediting_243971chr11_134286143_+SINEAluName=AluSx1
ADediting_243972chr11_134286170_+SINEAluName=AluSx1
ADediting_243973chr11_134286171_+SINEAluName=AluSx1
ADediting_243974chr11_134286183_+SINEAluName=AluSx1
ADediting_243975chr11_134286189_+SINEAluName=AluSx1
ADediting_243976chr11_134286522_+SINEAluName=AluY
ADediting_243977chr11_134286697_+SINEAluName=AluY
ADediting_243978chr11_134286759_+SINEAluName=AluY
ADediting_243979chr11_134286899_+SINEAluName=AluY
ADediting_243980chr11_134286905_+SINEAluName=AluY
ADediting_243981chr11_134286906_+SINEAluName=AluY
ADediting_243982chr11_134286911_+SINEAluName=AluY
ADediting_243983chr11_134287040_+SINEAluName=AluY
ADediting_243984chr11_134287073_+SINEAluName=AluY
ADediting_243985chr11_134287076_+SINEAluName=AluY
ADediting_243986chr11_134287081_+SINEAluName=AluY
ADediting_243987chr11_134287082_+SINEAluName=AluY
ADediting_243988chr11_134287110_+SINEAluName=AluY
ADediting_243989chr11_134287126_+SINEAluName=AluY
ADediting_243990chr11_134287145_+SINEAluName=AluY
ADediting_243991chr11_134287149_+SINEAluName=AluY
ADediting_243992chr11_134290358_+SINEAluName=AluSx
ADediting_243993chr11_134290363_+SINEAluName=AluSx
ADediting_243994chr11_134290446_+SINEAluName=AluSx
ADediting_243995chr11_134290452_+SINEAluName=AluSx
ADediting_243996chr11_134290466_+SINEAluName=AluSx
ADediting_243997chr11_134290488_+SINEAluName=AluSx
ADediting_243998chr11_134290493_+SINEAluName=AluSx
ADediting_243999chr11_134290494_+SINEAluName=AluSx
ADediting_244000chr11_134290503_+SINEAluName=AluSx
ADediting_244001chr11_134291341_+SINEAluName=AluSz
ADediting_244002chr11_134291359_+SINEAluName=AluSz
ADediting_244003chr11_134291360_+SINEAluName=AluSz
ADediting_244004chr11_134291363_+SINEAluName=AluSz
ADediting_244005chr11_134291364_+SINEAluName=AluSz
ADediting_244006chr11_134291389_+SINEAluName=AluSz
ADediting_244007chr11_134291396_+SINEAluName=AluSz
ADediting_244008chr11_134291399_+SINEAluName=AluSz
ADediting_244009chr11_134291405_+SINEAluName=AluSz
ADediting_244010chr11_134291417_+SINEAluName=AluSz
ADediting_244011chr11_134291456_+SINEAluName=AluSz
ADediting_244012chr11_134291482_+SINEAluName=AluSz
ADediting_244013chr11_134291789_+SINEAluName=AluJr4
ADediting_244014chr11_134291793_+SINEAluName=AluJr4
ADediting_244015chr11_134291854_+SINEAluName=AluJr4
ADediting_244016chr11_134291868_+SINEAluName=AluJr4
ADediting_244017chr11_134291914_+SINEAluName=AluJr4
ADediting_244018chr11_134318986_+SINEAluName=AluYj4
ADediting_244019chr11_134319016_+SINEAluName=AluYj4
ADediting_244020chr11_134319018_+SINEAluName=AluYj4
ADediting_244021chr11_134319035_+SINEAluName=AluYj4
ADediting_244022chr11_134319084_+SINEAluName=AluYj4
ADediting_244023chr11_134319094_+SINEAluName=AluYj4
ADediting_244024chr11_134319139_+SINEAluName=AluYj4
ADediting_244025chr11_134319161_+SINEAluName=AluYj4
ADediting_244026chr11_134319219_+SINEAluName=AluYj4
ADediting_1526408chr11_134285736_+SINEAluName=AluJo

Top

RNA A-to-I editing events in the alternative splicing sites for GLB1L3

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeADeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples

Top

Differntial gene expression between RNA A-to-I edited versus non-edited samples for GLB1L3

check button Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event.
* The grey color means N/A.

check button Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event.
boxplot
boxplot
boxplot
boxplot
boxplot
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview

check button - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
ADeditome IDChrPositoingSkipped exonENSGENSTs

Top

Protein coding region RNA A-to-I editings for GLB1L3

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


Top

The effects of the RNA editing to the miRNA binding sites for GLB1L3

check buttonRNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure.
all structure

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
ADediting_244021chr11_134319035_+ENSG00000166105.16ENST00000431683.7GLB1L3-203hsa-miR-596chr111343190311343190377mer-m8134319018134319038140-17.7
ADediting_244023chr11_134319094_+ENSG00000166105.16ENST00000431683.7GLB1L3-203hsa-miR-17-3pchr111343190901343190967mer-m8134319076134319097147-21.15
ADediting_244025chr11_134319161_+ENSG00000166105.16ENST00000431683.7GLB1L3-203hsa-miR-3190-5pchr111343191591343191657mer-m8134319147134319166155-20.45
ADediting_244025chr11_134319161_+ENSG00000166105.16ENST00000431683.7GLB1L3-203hsa-miR-548schr111343191581343191647mer-m8134319143134319165140-12.59
ADediting_244026chr11_134319219_+ENSG00000166105.16ENST00000431683.7GLB1L3-203hsa-miR-383-3pchr111343192151343192217mer-m8134319204134319222140-14.49

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
ADediting_244018chr11_134318986_+ENSG00000166105.16ENST00000431683.7GLB1L3-203hsa-miR-3609chr111343189831343189897mer-m8134318968134318990143-13.3
ADediting_244018chr11_134318986_+ENSG00000166105.16ENST00000431683.7GLB1L3-203hsa-miR-520g-3pchr111343189841343189907mer-m8134318966134318991152-18.26
ADediting_244018chr11_134318986_+ENSG00000166105.16ENST00000431683.7GLB1L3-203hsa-miR-520hchr111343189841343189907mer-m8134318968134318991151-18.06
ADediting_244018chr11_134318986_+ENSG00000166105.16ENST00000431683.7GLB1L3-203hsa-miR-548ah-5pchr111343189831343189897mer-m8134318971134318990140-8.02
ADediting_244019chr11_134319016_+ENSG00000166105.16ENST00000431683.7GLB1L3-203hsa-miR-1227-3pchr111343190101343190178mer-1a134318998134319017148-18.2
ADediting_244020chr11_134319018_+ENSG00000166105.16ENST00000431683.7GLB1L3-203hsa-miR-5186chr111343190161343190227mer-m8134319003134319023140-12.96
ADediting_244021chr11_134319035_+ENSG00000166105.16ENST00000431683.7GLB1L3-203hsa-miR-4327chr111343190301343190367mer-m8134319017134319037149-16.43
ADediting_244021chr11_134319035_+ENSG00000166105.16ENST00000431683.7GLB1L3-203hsa-miR-6516-5pchr111343190281343190347mer-m8134319013134319035152-19.34
ADediting_244022chr11_134319084_+ENSG00000166105.16ENST00000431683.7GLB1L3-203hsa-miR-3692-5pchr111343190781343190847mer-m8134319062134319085149-20.52
ADediting_244023chr11_134319094_+ENSG00000166105.16ENST00000431683.7GLB1L3-203hsa-miR-20b-3pchr111343190901343190967mer-m8134319076134319097146-19.41
ADediting_244024chr11_134319139_+ENSG00000166105.16ENST00000431683.7GLB1L3-203hsa-miR-3675-3pchr111343191371343191437mer-m8134319123134319144145-12.58
ADediting_244025chr11_134319161_+ENSG00000166105.16ENST00000431683.7GLB1L3-203hsa-miR-4794chr111343191591343191657mer-m8134319144134319166151-19.62
ADediting_244025chr11_134319161_+ENSG00000166105.16ENST00000431683.7GLB1L3-203hsa-miR-664a-5pchr111343191591343191657mer-m8134319143134319166141-15.64
ADediting_244026chr11_134319219_+ENSG00000166105.16ENST00000431683.7GLB1L3-203hsa-miR-4712-5pchr111343192161343192227mer-m8134319202134319223140-14.66
ADediting_244026chr11_134319219_+ENSG00000166105.16ENST00000431683.7GLB1L3-203hsa-miR-770-5pchr111343192161343192227mer-m8134319201134319223140-18.17

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for GLB1L3

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.
ENST00000431683.7protein_codingSoverviewSoverview

check button RNA A-to-I editing in miRNA.
ADeditom_IDENSTmir_IDEditing_InformationEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

check button RNA A-to-I editing in mRNA.
ADeditom_IDENSTEditing_InformationEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI
ADediting_244018ENST00000431683.7chr11_134318986_+2368-1070.80-1070.50-1081.70
ADediting_244019ENST00000431683.7chr11_134319016_+2398-1071.40-1070.50-1081.70
ADediting_244020ENST00000431683.7chr11_134319018_+2400-1070.50-1070.50-1081.70
ADediting_244021ENST00000431683.7chr11_134319035_+2417-1070.40-1070.50-1081.70
ADediting_244022ENST00000431683.7chr11_134319084_+2466-1076.70-1070.50-1081.70
ADediting_244023ENST00000431683.7chr11_134319094_+2476-1073.10-1070.50-1081.70
ADediting_244024ENST00000431683.7chr11_134319139_+2521-1072.40-1070.50-1081.70
ADediting_244025ENST00000431683.7chr11_134319161_+2543-1071.30-1070.50-1081.70
ADediting_244026ENST00000431683.7chr11_134319219_+2601-1073.10-1070.50-1081.70

check button RNA A-to-I editing in lncRNA.
ADeditom_IDENSTEditing_InformationEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

Top

Relation with ADAR for GLB1L3

check button Correlation between ADAR gene expression and RNA editing frequency
TissueADeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
DLPFCADediting_243894chr11_134284470_+9.44026937701093e-050.2199305191004410.05542217452717410.1089121666495591.54172663553501e-080.314375361094623
CERADediting_243894chr11_134284470_+0.00383203508672970.234758748342176.44925262927623e-050.3202929086115760.0953866594396280.136666086085532
DLPFCADediting_243902chr11_134284541_+0.0001126232686055630.2175728825559490.01465952798306190.138512194313263.47641514499941e-120.381617833740494
DLPFCADediting_243921chr11_134284668_+0.0001180933937212780.2169349392249240.0444960414411640.1142132329745293.64626487796871e-100.346344679726198
DLPFCADediting_243924chr11_134284692_+1.30430262747218e-050.2448075353354040.007236964848257570.1522643908487031.84303067843434e-110.36946182396989
CERADediting_243930chr11_134285190_+0.002060418448499230.2496852645625121.89825426607416e-050.3414793925719860.07427994454115140.1461742563734
CERADediting_243931chr11_134285202_+0.002151267068915880.2486754990628354.57407350966798e-050.3264036328278240.8469400034920250.0158923125609692
CERADediting_243947chr11_134285661_+0.0008349777878344650.2699613470985749.07804175037174e-060.35354911875470.01711971075920410.194428178729215
DLPFCADediting_243950chr11_134285679_+0.0001306282354375050.2155717854477890.09063759903840880.09626721590505817.58343967937037e-090.320724712930083
DLPFCADediting_243951chr11_134285683_+8.15816362324762e-060.250332930709530.03515000491263540.1197013715115423.61455872026732e-080.306547915399856
CERADediting_243952chr11_134285684_+0.004487607294999550.2308119059916520.0001907762879361310.3000878194793140.5571596166690010.0483098432323555
CERADediting_243954chr11_134285737_+0.001195348230963690.2620961418853854.28556038398553e-050.3275478952983470.6326690559919820.039340360527051
CERADediting_243957chr11_134285759_+0.0001218001693377110.308624552367223.49090040394305e-060.3684871790110840.3203816163870870.0816807750126132
DLPFCADediting_243958chr11_134285995_+0.0001528590848205280.2134309500919420.08731153436521370.09727000588750491.29537034117242e-110.372074191065917
DLPFCADediting_243960chr11_134286013_+0.0001563117871148490.2131249651006460.1792389570454160.07648025755823651.42903323108925e-150.432634581294696
DLPFCADediting_243969chr11_134286129_+0.00188531534556760.1758401642448770.05007504074687180.1113854932739224.57930216821632e-120.379644257980961
DLPFCADediting_243979chr11_134286899_+5.28868858627689e-080.3029762380659222.46296931192432e-050.2371084886883442.4755365219136e-060.263828786145917
DLPFCADediting_243980chr11_134286905_+1.93143414449588e-090.332563699683132.61606391266541e-050.2363647178691011.52418389430734e-100.35329521819161
DLPFCADediting_243981chr11_134286906_+1.25619317287289e-080.3162235088277711.14507440169679e-050.2463536422279213.98937345918389e-070.283156124457289
DLPFCADediting_243983chr11_134287040_+0.5133992391573210.03725698786718250.252285453199181-0.06521538574120951.31563579405165e-130.404111912398784
DLPFCADediting_243985chr11_134287076_+0.1166423384010790.08929720355761790.7345936623848730.01933141229114843.81804098726559e-110.363990288883025
DLPFCADediting_244003chr11_134291360_+0.03428352028980340.1202708279117390.3661205732358540.051504332626475.03908180381222e-110.361878113604233
DLPFCADediting_244004chr11_134291363_+0.03581111354690460.1192748550092810.7035715071629850.02169626472641547.70334409896124e-130.392183029074345
DLPFCADediting_244005chr11_134291364_+0.05897868052128160.107374704061240.904953549762187-0.006809245521590679.26430746086959e-130.390909525487136
DLPFCADediting_244006chr11_134291389_+2.00620730837205e-050.2396206681669230.1456700260322690.08283083950918215.83471449279049e-190.476304432033221
DLPFCADediting_244016chr11_134291868_+0.6832495946066990.02326555567560360.354419455710559-0.05277269466929824.22624756855021e-080.305086517091838
DLPFCADediting_244018chr11_134318986_+0.0002207875811633890.2083377888565955.03878943953957e-120.3789562726225430.01230914054709620.14202206234337

check button Correlation between ADAR gene expression and this gene's expression
TissueADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
DLPFC7.26094838601257e-110.3590737812752990.0001831495675951640.2109417901307721.66192027027217e-300.590386782102795
AC9.76178223588428e-300.6359521964259183.06498178302975e-400.7138044904560370.01105548622299580.160464626694598
PCC4.81148329068388e-350.7448159345061346.48488777492835e-450.8060040652527650.00518721688896920.201495554324805
CER2.36384558501821e-160.6051476181870452.43825657603894e-270.7406241760195140.08657093042589060.140409282820686
TCX1.82012242844935e-150.5904963466063291.41097691889932e-480.8754031302003630.000720004517404495-0.273141605075663
FP9.58439431278985e-390.7868984874180971.71217238855087e-310.7348424988118190.001816615057403270.232187932641305
IFG4.73136534178944e-070.8217918269166572.80945892271673e-060.7887621075470660.3663117076341490.188711047784497
PG4.27492532475324e-180.5797941735061352.46200995092735e-230.6458213555305790.33031312266819-0.0717709947702947
STG2.37392877076106e-190.7932288314555155.99333563570507e-150.7254022994780590.2349917773065710.130981073057287

Top

Relation with AD stages for GLB1L3

check button Correlation between AD stages and RNA editing frequency
TissueADeditomIDpositionP-valCoeff.

check button Correlation between AD stages and this gene's expression
TissueP-valCoeff.
CER9.87248328505292e-060.411130113497976

Top

RelatedDrugs for GLB1L3

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.0 2018-04-02)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

Top

RelatedDiseases for GLB1L3

check button Diseases associated with this gene.
(DisGeNet 4.0)
GeneDisease IDDisease name# pubmedsSource