|
||||||
|
 | |
| |
| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
| |
| |
| The effects of the RNA editing to the stability of the RNA structures |
| |
| |
| |
|
Gene summary for SPACA9 |
 Gene summary |
| Gene information | Gene symbol | SPACA9 | Gene ID | 11092 |
| Gene name | sperm acrosome associated 9 | |
| Synonyms | C9orf9|Mast | |
| Cytomap | 9q34.13 | |
| Type of gene | protein-coding | |
| Description | sperm acrosome-associated protein 9Rsb66 homolog | |
| Modification date | 20200313 | |
| UniProtAcc | Q96E40, | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
Top |
RNA A-to-I events for SPACA9 |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA editing frequencies across three data sets. |
 |
| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA A-to-I editing events in AD. |
| ADediting_1453960(132881086, +), ADediting_1453961(132881216, +), ADediting_1453962(132881346, +), ADediting_1453963(132881361, +), ADediting_1453964(132881383, +), ADediting_1453965(132881388, +), ADediting_1453966(132881431, +), ADediting_1453967(132885433, +), ADediting_1453968(132886912, +), ADediting_1453969(132887066, +), ADediting_1453970(132888848, +), ADediting_1453971(132888872, +), ADediting_1453972(132888894, +), ADediting_1453973(132888897, +), ADediting_1453974(132888907, +), ADediting_1453975(132888974, +), ADediting_1453976(132888978, +), ADediting_1453977(132888989, +), ADediting_1453978(132889031, +), ADediting_1453979(132889032, +), ADediting_1453980(132889044, +), ADediting_1453981(132889204, +), ADediting_1453982(132889438, +), ADediting_1453983(132889468, +), ADediting_1453984(132889493, +), ADediting_1453985(132889505, +), ADediting_1453986(132889506, +), ADediting_1453987(132889523, +), ADediting_1453988(132889535, +), ADediting_1453989(132889545, +), ADediting_1453990(132889595, +), ADediting_1453991(132889598, +), ADediting_1453992(132889658, +), ADediting_1453993(132889676, +), ADediting_1453994(132889677, +), ADediting_1453995(132889689, +), |
Top |
RNA editing positional annotations for SPACA9 using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_1453960 | chr9_132881086_+ | intronic |
| ADediting_1453961 | chr9_132881216_+ | intronic |
| ADediting_1453962 | chr9_132881346_+ | intronic |
| ADediting_1453963 | chr9_132881361_+ | intronic |
| ADediting_1453964 | chr9_132881383_+ | intronic |
| ADediting_1453965 | chr9_132881388_+ | intronic |
| ADediting_1453966 | chr9_132881431_+ | intronic |
| ADediting_1453967 | chr9_132885433_+ | intronic |
| ADediting_1453968 | chr9_132886912_+ | intronic |
| ADediting_1453969 | chr9_132887066_+ | intronic |
| ADediting_1453970 | chr9_132888848_+ | UTR3 |
| ADediting_1453971 | chr9_132888872_+ | UTR3 |
| ADediting_1453972 | chr9_132888894_+ | UTR3 |
| ADediting_1453973 | chr9_132888897_+ | UTR3 |
| ADediting_1453974 | chr9_132888907_+ | UTR3 |
| ADediting_1453975 | chr9_132888974_+ | UTR3 |
| ADediting_1453976 | chr9_132888978_+ | UTR3 |
| ADediting_1453977 | chr9_132888989_+ | UTR3 |
| ADediting_1453978 | chr9_132889031_+ | UTR3 |
| ADediting_1453979 | chr9_132889032_+ | UTR3 |
| ADediting_1453980 | chr9_132889044_+ | UTR3 |
| ADediting_1453981 | chr9_132889204_+ | UTR3 |
| ADediting_1453982 | chr9_132889438_+ | UTR3 |
| ADediting_1453983 | chr9_132889468_+ | UTR3 |
| ADediting_1453984 | chr9_132889493_+ | UTR3 |
| ADediting_1453985 | chr9_132889505_+ | UTR3 |
| ADediting_1453986 | chr9_132889506_+ | UTR3 |
| ADediting_1453987 | chr9_132889523_+ | UTR3 |
| ADediting_1453988 | chr9_132889535_+ | UTR3 |
| ADediting_1453989 | chr9_132889545_+ | UTR3 |
| ADediting_1453990 | chr9_132889595_+ | UTR3 |
| ADediting_1453991 | chr9_132889598_+ | UTR3 |
| ADediting_1453992 | chr9_132889658_+ | UTR3 |
| ADediting_1453993 | chr9_132889676_+ | UTR3 |
| ADediting_1453994 | chr9_132889677_+ | UTR3 |
| ADediting_1453995 | chr9_132889689_+ | UTR3 |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_1453960 | chr9_132881086_+ | SINE | Alu | Name=AluY |
| ADediting_1453961 | chr9_132881216_+ | SINE | Alu | Name=FLAM_C |
| ADediting_1453962 | chr9_132881346_+ | SINE | Alu | Name=AluJb |
| ADediting_1453963 | chr9_132881361_+ | SINE | Alu | Name=AluJb |
| ADediting_1453964 | chr9_132881383_+ | SINE | Alu | Name=AluJb |
| ADediting_1453965 | chr9_132881388_+ | SINE | Alu | Name=AluJb |
| ADediting_1453966 | chr9_132881431_+ | SINE | Alu | Name=AluJb |
| ADediting_1453967 | chr9_132885433_+ | SINE | Alu | Name=AluSx |
| ADediting_1453968 | chr9_132886912_+ | SINE | Alu | Name=AluSz |
| ADediting_1453969 | chr9_132887066_+ | SINE | Alu | Name=AluSz |
| ADediting_1453970 | chr9_132888848_+ | SINE | Alu | Name=AluYf1 |
| ADediting_1453971 | chr9_132888872_+ | SINE | Alu | Name=AluYf1 |
| ADediting_1453972 | chr9_132888894_+ | SINE | Alu | Name=AluYf1 |
| ADediting_1453973 | chr9_132888897_+ | SINE | Alu | Name=AluYf1 |
| ADediting_1453974 | chr9_132888907_+ | SINE | Alu | Name=AluYf1 |
| ADediting_1453975 | chr9_132888974_+ | SINE | Alu | Name=AluYf1 |
| ADediting_1453976 | chr9_132888978_+ | SINE | Alu | Name=AluYf1 |
| ADediting_1453977 | chr9_132888989_+ | SINE | Alu | Name=AluYf1 |
| ADediting_1453978 | chr9_132889031_+ | SINE | Alu | Name=AluYf1 |
| ADediting_1453979 | chr9_132889032_+ | SINE | Alu | Name=AluYf1 |
| ADediting_1453980 | chr9_132889044_+ | SINE | Alu | Name=AluYf1 |
| ADediting_1453982 | chr9_132889438_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1453983 | chr9_132889468_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1453984 | chr9_132889493_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1453985 | chr9_132889505_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1453986 | chr9_132889506_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1453987 | chr9_132889523_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1453988 | chr9_132889535_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1453989 | chr9_132889545_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1453990 | chr9_132889595_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1453991 | chr9_132889598_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1453992 | chr9_132889658_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1453993 | chr9_132889676_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1453994 | chr9_132889677_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1453995 | chr9_132889689_+ | SINE | Alu | Name=AluSx1 |
Top |
RNA A-to-I editing events in the alternative splicing sites for SPACA9 |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
Top |
Differntial gene expression between RNA A-to-I edited versus non-edited samples for SPACA9 |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
 | |
 | |
| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
Top |
Protein coding region RNA A-to-I editings for SPACA9 |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
Top |
The effects of the RNA editing to the miRNA binding sites for SPACA9 |
| RNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. |
 |
| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1453970 | chr9_132888848_+ | ENSG00000165698.16 | ENST00000356311.10 | SPACA9-202 | hsa-miR-17-3p | chr9 | 132888841 | 132888847 | 7mer-m8 | 132888827 | 132888848 | 150 | -18.77 |
| ADediting_1453970 | chr9_132888848_+ | ENSG00000165698.16 | ENST00000356311.10 | SPACA9-202 | hsa-miR-485-5p | chr9 | 132888845 | 132888851 | 7mer-m8 | 132888832 | 132888852 | 153 | -18.27 |
| ADediting_1453970 | chr9_132888848_+ | ENSG00000165698.16 | ENST00000356311.10 | SPACA9-202 | hsa-miR-6884-5p | chr9 | 132888845 | 132888851 | 7mer-m8 | 132888829 | 132888852 | 154 | -23.9 |
| ADediting_1453970 | chr9_132888848_+ | ENSG00000165698.16 | ENST00000372136.7 | SPACA9-203 | hsa-miR-17-3p | chr9 | 132888841 | 132888847 | 7mer-m8 | 132888827 | 132888848 | 150 | -18.77 |
| ADediting_1453970 | chr9_132888848_+ | ENSG00000165698.16 | ENST00000372136.7 | SPACA9-203 | hsa-miR-485-5p | chr9 | 132888845 | 132888851 | 7mer-m8 | 132888832 | 132888852 | 153 | -18.27 |
| ADediting_1453970 | chr9_132888848_+ | ENSG00000165698.16 | ENST00000372136.7 | SPACA9-203 | hsa-miR-6884-5p | chr9 | 132888845 | 132888851 | 7mer-m8 | 132888829 | 132888852 | 154 | -23.9 |
| ADediting_1453973 | chr9_132888897_+ | ENSG00000165698.16 | ENST00000356311.10 | SPACA9-202 | hsa-miR-3614-5p | chr9 | 132888890 | 132888896 | 7mer-m8 | 132888874 | 132888897 | 152 | -25.27 |
| ADediting_1453973 | chr9_132888897_+ | ENSG00000165698.16 | ENST00000356311.10 | SPACA9-202 | hsa-miR-4691-3p | chr9 | 132888894 | 132888900 | 7mer-m8 | 132888874 | 132888901 | 150 | -26.36 |
| ADediting_1453973 | chr9_132888897_+ | ENSG00000165698.16 | ENST00000372136.7 | SPACA9-203 | hsa-miR-3614-5p | chr9 | 132888890 | 132888896 | 7mer-m8 | 132888874 | 132888897 | 152 | -25.27 |
| ADediting_1453973 | chr9_132888897_+ | ENSG00000165698.16 | ENST00000372136.7 | SPACA9-203 | hsa-miR-4691-3p | chr9 | 132888894 | 132888900 | 7mer-m8 | 132888874 | 132888901 | 150 | -26.36 |
| ADediting_1453974 | chr9_132888907_+ | ENSG00000165698.16 | ENST00000356311.10 | SPACA9-202 | hsa-miR-17-3p | chr9 | 132888903 | 132888909 | 7mer-m8 | 132888888 | 132888910 | 158 | -20.42 |
| ADediting_1453974 | chr9_132888907_+ | ENSG00000165698.16 | ENST00000372136.7 | SPACA9-203 | hsa-miR-17-3p | chr9 | 132888903 | 132888909 | 7mer-m8 | 132888888 | 132888910 | 158 | -20.42 |
| ADediting_1453975 | chr9_132888974_+ | ENSG00000165698.16 | ENST00000356311.10 | SPACA9-202 | hsa-miR-3190-5p | chr9 | 132888972 | 132888978 | 7mer-m8 | 132888960 | 132888979 | 147 | -18.34 |
| ADediting_1453975 | chr9_132888974_+ | ENSG00000165698.16 | ENST00000356311.10 | SPACA9-202 | hsa-miR-548s | chr9 | 132888971 | 132888977 | 7mer-m8 | 132888957 | 132888978 | 143 | -12 |
| ADediting_1453975 | chr9_132888974_+ | ENSG00000165698.16 | ENST00000372136.7 | SPACA9-203 | hsa-miR-3190-5p | chr9 | 132888972 | 132888978 | 7mer-m8 | 132888960 | 132888979 | 147 | -18.34 |
| ADediting_1453975 | chr9_132888974_+ | ENSG00000165698.16 | ENST00000372136.7 | SPACA9-203 | hsa-miR-548s | chr9 | 132888971 | 132888977 | 7mer-m8 | 132888957 | 132888978 | 143 | -12 |
| ADediting_1453978 | chr9_132889031_+ | ENSG00000165698.16 | ENST00000356311.10 | SPACA9-202 | hsa-miR-3192-5p | chr9 | 132889024 | 132889031 | 8mer-1a | 132889009 | 132889031 | 158 | -30.26 |
| ADediting_1453978 | chr9_132889031_+ | ENSG00000165698.16 | ENST00000356311.10 | SPACA9-202 | hsa-miR-326 | chr9 | 132889026 | 132889032 | 7mer-m8 | 132889014 | 132889033 | 140 | -14.32 |
| ADediting_1453978 | chr9_132889031_+ | ENSG00000165698.16 | ENST00000356311.10 | SPACA9-202 | hsa-miR-330-5p | chr9 | 132889026 | 132889032 | 7mer-m8 | 132889012 | 132889033 | 140 | -20.08 |
| ADediting_1453978 | chr9_132889031_+ | ENSG00000165698.16 | ENST00000356311.10 | SPACA9-202 | hsa-miR-4314 | chr9 | 132889025 | 132889031 | 7mer-m8 | 132889015 | 132889032 | 140 | -19.27 |
| ADediting_1453978 | chr9_132889031_+ | ENSG00000165698.16 | ENST00000356311.10 | SPACA9-202 | hsa-miR-514a-5p | chr9 | 132889027 | 132889033 | 7mer-m8 | 132889014 | 132889034 | 161 | -25.3 |
| ADediting_1453978 | chr9_132889031_+ | ENSG00000165698.16 | ENST00000372136.7 | SPACA9-203 | hsa-miR-3192-5p | chr9 | 132889024 | 132889031 | 8mer-1a | 132889009 | 132889031 | 158 | -30.26 |
| ADediting_1453978 | chr9_132889031_+ | ENSG00000165698.16 | ENST00000372136.7 | SPACA9-203 | hsa-miR-326 | chr9 | 132889026 | 132889032 | 7mer-m8 | 132889014 | 132889033 | 140 | -14.32 |
| ADediting_1453978 | chr9_132889031_+ | ENSG00000165698.16 | ENST00000372136.7 | SPACA9-203 | hsa-miR-330-5p | chr9 | 132889026 | 132889032 | 7mer-m8 | 132889012 | 132889033 | 140 | -20.08 |
| ADediting_1453978 | chr9_132889031_+ | ENSG00000165698.16 | ENST00000372136.7 | SPACA9-203 | hsa-miR-4314 | chr9 | 132889025 | 132889031 | 7mer-m8 | 132889015 | 132889032 | 140 | -19.27 |
| ADediting_1453978 | chr9_132889031_+ | ENSG00000165698.16 | ENST00000372136.7 | SPACA9-203 | hsa-miR-514a-5p | chr9 | 132889027 | 132889033 | 7mer-m8 | 132889014 | 132889034 | 161 | -25.3 |
| ADediting_1453979 | chr9_132889032_+ | ENSG00000165698.16 | ENST00000356311.10 | SPACA9-202 | hsa-miR-3189-3p | chr9 | 132889026 | 132889032 | 7mer-m8 | 132889011 | 132889033 | 145 | -22.44 |
| ADediting_1453979 | chr9_132889032_+ | ENSG00000165698.16 | ENST00000356311.10 | SPACA9-202 | hsa-miR-6813-3p | chr9 | 132889027 | 132889033 | 7mer-m8 | 132889014 | 132889034 | 140 | -12.07 |
| ADediting_1453979 | chr9_132889032_+ | ENSG00000165698.16 | ENST00000372136.7 | SPACA9-203 | hsa-miR-3189-3p | chr9 | 132889026 | 132889032 | 7mer-m8 | 132889011 | 132889033 | 145 | -22.44 |
| ADediting_1453979 | chr9_132889032_+ | ENSG00000165698.16 | ENST00000372136.7 | SPACA9-203 | hsa-miR-6813-3p | chr9 | 132889027 | 132889033 | 7mer-m8 | 132889014 | 132889034 | 140 | -12.07 |
| ADediting_1453981 | chr9_132889204_+ | ENSG00000165698.16 | ENST00000356311.10 | SPACA9-202 | hsa-miR-125a-3p | chr9 | 132889197 | 132889203 | 7mer-m8 | 132889182 | 132889204 | 152 | -21.32 |
| ADediting_1453981 | chr9_132889204_+ | ENSG00000165698.16 | ENST00000356311.10 | SPACA9-202 | hsa-miR-4726-3p | chr9 | 132889199 | 132889205 | 7mer-m8 | 132889182 | 132889206 | 141 | -22.41 |
| ADediting_1453981 | chr9_132889204_+ | ENSG00000165698.16 | ENST00000356311.10 | SPACA9-202 | hsa-miR-711 | chr9 | 132889202 | 132889208 | 7mer-m8 | 132889187 | 132889209 | 158 | -27.18 |
| ADediting_1453981 | chr9_132889204_+ | ENSG00000165698.16 | ENST00000372136.7 | SPACA9-203 | hsa-miR-125a-3p | chr9 | 132889197 | 132889203 | 7mer-m8 | 132889182 | 132889204 | 152 | -21.32 |
| ADediting_1453981 | chr9_132889204_+ | ENSG00000165698.16 | ENST00000372136.7 | SPACA9-203 | hsa-miR-4726-3p | chr9 | 132889199 | 132889205 | 7mer-m8 | 132889182 | 132889206 | 141 | -22.41 |
| ADediting_1453981 | chr9_132889204_+ | ENSG00000165698.16 | ENST00000372136.7 | SPACA9-203 | hsa-miR-711 | chr9 | 132889202 | 132889208 | 7mer-m8 | 132889187 | 132889209 | 158 | -27.18 |
| ADediting_1453984 | chr9_132889493_+ | ENSG00000165698.16 | ENST00000356311.10 | SPACA9-202 | hsa-miR-25-5p | chr9 | 132889488 | 132889494 | 7mer-m8 | 132889476 | 132889495 | 143 | -19.97 |
| ADediting_1453984 | chr9_132889493_+ | ENSG00000165698.16 | ENST00000356311.10 | SPACA9-202 | hsa-miR-658 | chr9 | 132889487 | 132889493 | 7mer-m8 | 132889468 | 132889494 | 153 | -29.56 |
| ADediting_1453984 | chr9_132889493_+ | ENSG00000165698.16 | ENST00000372136.7 | SPACA9-203 | hsa-miR-25-5p | chr9 | 132889488 | 132889494 | 7mer-m8 | 132889476 | 132889495 | 143 | -19.97 |
| ADediting_1453984 | chr9_132889493_+ | ENSG00000165698.16 | ENST00000372136.7 | SPACA9-203 | hsa-miR-658 | chr9 | 132889487 | 132889493 | 7mer-m8 | 132889468 | 132889494 | 153 | -29.56 |
| ADediting_1453986 | chr9_132889506_+ | ENSG00000165698.16 | ENST00000356311.10 | SPACA9-202 | hsa-miR-6078 | chr9 | 132889502 | 132889509 | 8mer-1a | 132889491 | 132889509 | 149 | -21.32 |
| ADediting_1453986 | chr9_132889506_+ | ENSG00000165698.16 | ENST00000372136.7 | SPACA9-203 | hsa-miR-6078 | chr9 | 132889502 | 132889509 | 8mer-1a | 132889491 | 132889509 | 149 | -21.32 |
| ADediting_1453987 | chr9_132889523_+ | ENSG00000165698.16 | ENST00000356311.10 | SPACA9-202 | hsa-miR-6089 | chr9 | 132889521 | 132889527 | 7mer-m8 | 132889505 | 132889528 | 164 | -39.99 |
| ADediting_1453987 | chr9_132889523_+ | ENSG00000165698.16 | ENST00000372136.7 | SPACA9-203 | hsa-miR-6089 | chr9 | 132889521 | 132889527 | 7mer-m8 | 132889505 | 132889528 | 164 | -39.99 |
| ADediting_1453988 | chr9_132889535_+ | ENSG00000165698.16 | ENST00000356311.10 | SPACA9-202 | hsa-miR-4691-3p | chr9 | 132889532 | 132889538 | 7mer-m8 | 132889512 | 132889539 | 150 | -26.36 |
| ADediting_1453988 | chr9_132889535_+ | ENSG00000165698.16 | ENST00000372136.7 | SPACA9-203 | hsa-miR-4691-3p | chr9 | 132889532 | 132889538 | 7mer-m8 | 132889512 | 132889539 | 150 | -26.36 |
| ADediting_1453990 | chr9_132889595_+ | ENSG00000165698.16 | ENST00000356311.10 | SPACA9-202 | hsa-miR-3613-3p | chr9 | 132889588 | 132889594 | 7mer-m8 | 132889572 | 132889595 | 144 | -3.57 |
| ADediting_1453990 | chr9_132889595_+ | ENSG00000165698.16 | ENST00000372136.7 | SPACA9-203 | hsa-miR-3613-3p | chr9 | 132889588 | 132889594 | 7mer-m8 | 132889572 | 132889595 | 144 | -3.57 |
| ADediting_1453992 | chr9_132889658_+ | ENSG00000165698.16 | ENST00000356311.10 | SPACA9-202 | hsa-miR-4767 | chr9 | 132889656 | 132889662 | 7mer-m8 | 132889641 | 132889663 | 146 | -21.37 |
| ADediting_1453992 | chr9_132889658_+ | ENSG00000165698.16 | ENST00000372136.7 | SPACA9-203 | hsa-miR-4767 | chr9 | 132889656 | 132889662 | 7mer-m8 | 132889641 | 132889663 | 146 | -21.37 |
| ADediting_1453993 | chr9_132889676_+ | ENSG00000165698.16 | ENST00000356311.10 | SPACA9-202 | hsa-miR-326 | chr9 | 132889671 | 132889677 | 7mer-m8 | 132889659 | 132889678 | 140 | -15.12 |
| ADediting_1453993 | chr9_132889676_+ | ENSG00000165698.16 | ENST00000356311.10 | SPACA9-202 | hsa-miR-330-5p | chr9 | 132889671 | 132889677 | 7mer-m8 | 132889657 | 132889678 | 140 | -21.22 |
| ADediting_1453993 | chr9_132889676_+ | ENSG00000165698.16 | ENST00000356311.10 | SPACA9-202 | hsa-miR-4314 | chr9 | 132889670 | 132889676 | 7mer-m8 | 132889660 | 132889677 | 140 | -21.17 |
| ADediting_1453993 | chr9_132889676_+ | ENSG00000165698.16 | ENST00000356311.10 | SPACA9-202 | hsa-miR-514a-5p | chr9 | 132889672 | 132889678 | 7mer-m8 | 132889656 | 132889679 | 146 | -20.07 |
| ADediting_1453993 | chr9_132889676_+ | ENSG00000165698.16 | ENST00000372136.7 | SPACA9-203 | hsa-miR-326 | chr9 | 132889671 | 132889677 | 7mer-m8 | 132889659 | 132889678 | 140 | -15.12 |
| ADediting_1453993 | chr9_132889676_+ | ENSG00000165698.16 | ENST00000372136.7 | SPACA9-203 | hsa-miR-330-5p | chr9 | 132889671 | 132889677 | 7mer-m8 | 132889657 | 132889678 | 140 | -21.22 |
| ADediting_1453993 | chr9_132889676_+ | ENSG00000165698.16 | ENST00000372136.7 | SPACA9-203 | hsa-miR-4314 | chr9 | 132889670 | 132889676 | 7mer-m8 | 132889660 | 132889677 | 140 | -21.17 |
| ADediting_1453993 | chr9_132889676_+ | ENSG00000165698.16 | ENST00000372136.7 | SPACA9-203 | hsa-miR-514a-5p | chr9 | 132889672 | 132889678 | 7mer-m8 | 132889656 | 132889679 | 146 | -20.07 |
| ADediting_1453994 | chr9_132889677_+ | ENSG00000165698.16 | ENST00000356311.10 | SPACA9-202 | hsa-miR-3189-3p | chr9 | 132889671 | 132889677 | 7mer-m8 | 132889655 | 132889678 | 153 | -24.71 |
| ADediting_1453994 | chr9_132889677_+ | ENSG00000165698.16 | ENST00000356311.10 | SPACA9-202 | hsa-miR-6813-3p | chr9 | 132889672 | 132889678 | 7mer-m8 | 132889659 | 132889679 | 140 | -12.55 |
| ADediting_1453994 | chr9_132889677_+ | ENSG00000165698.16 | ENST00000372136.7 | SPACA9-203 | hsa-miR-3189-3p | chr9 | 132889671 | 132889677 | 7mer-m8 | 132889655 | 132889678 | 153 | -24.71 |
| ADediting_1453994 | chr9_132889677_+ | ENSG00000165698.16 | ENST00000372136.7 | SPACA9-203 | hsa-miR-6813-3p | chr9 | 132889672 | 132889678 | 7mer-m8 | 132889659 | 132889679 | 140 | -12.55 |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1453970 | chr9_132888848_+ | ENSG00000165698.16 | ENST00000356311.10 | SPACA9-202 | hsa-miR-377-5p | chr9 | 132888845 | 132888851 | 7mer-m8 | 132888830 | 132888852 | 149 | -17.66 |
| ADediting_1453970 | chr9_132888848_+ | ENSG00000165698.16 | ENST00000356311.10 | SPACA9-202 | hsa-miR-6086 | chr9 | 132888845 | 132888851 | 7mer-m8 | 132888833 | 132888852 | 150 | -23.99 |
| ADediting_1453970 | chr9_132888848_+ | ENSG00000165698.16 | ENST00000356311.10 | SPACA9-202 | hsa-miR-6516-5p | chr9 | 132888841 | 132888847 | 7mer-m8 | 132888826 | 132888848 | 148 | -17.04 |
| ADediting_1453970 | chr9_132888848_+ | ENSG00000165698.16 | ENST00000372136.7 | SPACA9-203 | hsa-miR-377-5p | chr9 | 132888845 | 132888851 | 7mer-m8 | 132888830 | 132888852 | 149 | -17.66 |
| ADediting_1453970 | chr9_132888848_+ | ENSG00000165698.16 | ENST00000372136.7 | SPACA9-203 | hsa-miR-6086 | chr9 | 132888845 | 132888851 | 7mer-m8 | 132888833 | 132888852 | 150 | -23.99 |
| ADediting_1453970 | chr9_132888848_+ | ENSG00000165698.16 | ENST00000372136.7 | SPACA9-203 | hsa-miR-6516-5p | chr9 | 132888841 | 132888847 | 7mer-m8 | 132888826 | 132888848 | 148 | -17.04 |
| ADediting_1453972 | chr9_132888894_+ | ENSG00000165698.16 | ENST00000356311.10 | SPACA9-202 | hsa-miR-12126 | chr9 | 132888889 | 132888896 | 8mer-1a | 132888873 | 132888896 | 147 | -13.23 |
| ADediting_1453972 | chr9_132888894_+ | ENSG00000165698.16 | ENST00000356311.10 | SPACA9-202 | hsa-miR-887-5p | chr9 | 132888887 | 132888893 | 7mer-m8 | 132888875 | 132888894 | 143 | -19.73 |
| ADediting_1453972 | chr9_132888894_+ | ENSG00000165698.16 | ENST00000372136.7 | SPACA9-203 | hsa-miR-12126 | chr9 | 132888889 | 132888896 | 8mer-1a | 132888873 | 132888896 | 147 | -13.23 |
| ADediting_1453972 | chr9_132888894_+ | ENSG00000165698.16 | ENST00000372136.7 | SPACA9-203 | hsa-miR-887-5p | chr9 | 132888887 | 132888893 | 7mer-m8 | 132888875 | 132888894 | 143 | -19.73 |
| ADediting_1453973 | chr9_132888897_+ | ENSG00000165698.16 | ENST00000356311.10 | SPACA9-202 | hsa-miR-5690 | chr9 | 132888894 | 132888900 | 7mer-m8 | 132888881 | 132888901 | 145 | -16.74 |
| ADediting_1453973 | chr9_132888897_+ | ENSG00000165698.16 | ENST00000372136.7 | SPACA9-203 | hsa-miR-5690 | chr9 | 132888894 | 132888900 | 7mer-m8 | 132888881 | 132888901 | 145 | -16.74 |
| ADediting_1453975 | chr9_132888974_+ | ENSG00000165698.16 | ENST00000356311.10 | SPACA9-202 | hsa-miR-4794 | chr9 | 132888972 | 132888978 | 7mer-m8 | 132888957 | 132888979 | 150 | -17.77 |
| ADediting_1453975 | chr9_132888974_+ | ENSG00000165698.16 | ENST00000356311.10 | SPACA9-202 | hsa-miR-664a-5p | chr9 | 132888972 | 132888978 | 7mer-m8 | 132888952 | 132888979 | 146 | -18.97 |
| ADediting_1453975 | chr9_132888974_+ | ENSG00000165698.16 | ENST00000372136.7 | SPACA9-203 | hsa-miR-4794 | chr9 | 132888972 | 132888978 | 7mer-m8 | 132888957 | 132888979 | 150 | -17.77 |
| ADediting_1453975 | chr9_132888974_+ | ENSG00000165698.16 | ENST00000372136.7 | SPACA9-203 | hsa-miR-664a-5p | chr9 | 132888972 | 132888978 | 7mer-m8 | 132888952 | 132888979 | 146 | -18.97 |
| ADediting_1453976 | chr9_132888978_+ | ENSG00000165698.16 | ENST00000356311.10 | SPACA9-202 | hsa-miR-4793-5p | chr9 | 132888976 | 132888982 | 7mer-m8 | 132888960 | 132888983 | 154 | -18.88 |
| ADediting_1453976 | chr9_132888978_+ | ENSG00000165698.16 | ENST00000356311.10 | SPACA9-202 | hsa-miR-4794 | chr9 | 132888972 | 132888978 | 7mer-m8 | 132888957 | 132888979 | 150 | -17.77 |
| ADediting_1453976 | chr9_132888978_+ | ENSG00000165698.16 | ENST00000356311.10 | SPACA9-202 | hsa-miR-664a-5p | chr9 | 132888972 | 132888978 | 7mer-m8 | 132888952 | 132888979 | 146 | -18.97 |
| ADediting_1453976 | chr9_132888978_+ | ENSG00000165698.16 | ENST00000372136.7 | SPACA9-203 | hsa-miR-4793-5p | chr9 | 132888976 | 132888982 | 7mer-m8 | 132888960 | 132888983 | 154 | -18.88 |
| ADediting_1453976 | chr9_132888978_+ | ENSG00000165698.16 | ENST00000372136.7 | SPACA9-203 | hsa-miR-4794 | chr9 | 132888972 | 132888978 | 7mer-m8 | 132888957 | 132888979 | 150 | -17.77 |
| ADediting_1453976 | chr9_132888978_+ | ENSG00000165698.16 | ENST00000372136.7 | SPACA9-203 | hsa-miR-664a-5p | chr9 | 132888972 | 132888978 | 7mer-m8 | 132888952 | 132888979 | 146 | -18.97 |
| ADediting_1453977 | chr9_132888989_+ | ENSG00000165698.16 | ENST00000356311.10 | SPACA9-202 | hsa-miR-5186 | chr9 | 132888987 | 132888993 | 7mer-m8 | 132888974 | 132888994 | 147 | -15.89 |
| ADediting_1453977 | chr9_132888989_+ | ENSG00000165698.16 | ENST00000372136.7 | SPACA9-203 | hsa-miR-5186 | chr9 | 132888987 | 132888993 | 7mer-m8 | 132888974 | 132888994 | 147 | -15.89 |
| ADediting_1453982 | chr9_132889438_+ | ENSG00000165698.16 | ENST00000356311.10 | SPACA9-202 | hsa-miR-5586-3p | chr9 | 132889435 | 132889441 | 7mer-m8 | 132889421 | 132889442 | 148 | -15.42 |
| ADediting_1453982 | chr9_132889438_+ | ENSG00000165698.16 | ENST00000356311.10 | SPACA9-202 | hsa-miR-759 | chr9 | 132889436 | 132889442 | 7mer-m8 | 132889421 | 132889443 | 155 | -16.3 |
| ADediting_1453982 | chr9_132889438_+ | ENSG00000165698.16 | ENST00000372136.7 | SPACA9-203 | hsa-miR-5586-3p | chr9 | 132889435 | 132889441 | 7mer-m8 | 132889421 | 132889442 | 148 | -15.42 |
| ADediting_1453982 | chr9_132889438_+ | ENSG00000165698.16 | ENST00000372136.7 | SPACA9-203 | hsa-miR-759 | chr9 | 132889436 | 132889442 | 7mer-m8 | 132889421 | 132889443 | 155 | -16.3 |
| ADediting_1453983 | chr9_132889468_+ | ENSG00000165698.16 | ENST00000356311.10 | SPACA9-202 | hsa-miR-1227-3p | chr9 | 132889462 | 132889468 | 7mer-m8 | 132889450 | 132889469 | 148 | -22.88 |
| ADediting_1453983 | chr9_132889468_+ | ENSG00000165698.16 | ENST00000372136.7 | SPACA9-203 | hsa-miR-1227-3p | chr9 | 132889462 | 132889468 | 7mer-m8 | 132889450 | 132889469 | 148 | -22.88 |
| ADediting_1453984 | chr9_132889493_+ | ENSG00000165698.16 | ENST00000356311.10 | SPACA9-202 | hsa-miR-3689d | chr9 | 132889491 | 132889498 | 8mer-1a | 132889478 | 132889498 | 146 | -14.69 |
| ADediting_1453984 | chr9_132889493_+ | ENSG00000165698.16 | ENST00000356311.10 | SPACA9-202 | hsa-miR-6851-5p | chr9 | 132889491 | 132889498 | 8mer-1a | 132889472 | 132889498 | 155 | -29.5 |
| ADediting_1453984 | chr9_132889493_+ | ENSG00000165698.16 | ENST00000356311.10 | SPACA9-202 | hsa-miR-7847-3p | chr9 | 132889487 | 132889493 | 7mer-m8 | 132889472 | 132889494 | 146 | -19.07 |
| ADediting_1453984 | chr9_132889493_+ | ENSG00000165698.16 | ENST00000372136.7 | SPACA9-203 | hsa-miR-3689d | chr9 | 132889491 | 132889498 | 8mer-1a | 132889478 | 132889498 | 146 | -14.69 |
| ADediting_1453984 | chr9_132889493_+ | ENSG00000165698.16 | ENST00000372136.7 | SPACA9-203 | hsa-miR-6851-5p | chr9 | 132889491 | 132889498 | 8mer-1a | 132889472 | 132889498 | 155 | -29.5 |
| ADediting_1453984 | chr9_132889493_+ | ENSG00000165698.16 | ENST00000372136.7 | SPACA9-203 | hsa-miR-7847-3p | chr9 | 132889487 | 132889493 | 7mer-m8 | 132889472 | 132889494 | 146 | -19.07 |
| ADediting_1453987 | chr9_132889523_+ | ENSG00000165698.16 | ENST00000356311.10 | SPACA9-202 | hsa-miR-4478 | chr9 | 132889520 | 132889526 | 7mer-m8 | 132889512 | 132889527 | 149 | -25.05 |
| ADediting_1453987 | chr9_132889523_+ | ENSG00000165698.16 | ENST00000356311.10 | SPACA9-202 | hsa-miR-4649-3p | chr9 | 132889517 | 132889523 | 7mer-m8 | 132889504 | 132889524 | 140 | -14.11 |
| ADediting_1453987 | chr9_132889523_+ | ENSG00000165698.16 | ENST00000356311.10 | SPACA9-202 | hsa-miR-7160-5p | chr9 | 132889518 | 132889524 | 7mer-m8 | 132889505 | 132889525 | 146 | -20.4 |
| ADediting_1453987 | chr9_132889523_+ | ENSG00000165698.16 | ENST00000372136.7 | SPACA9-203 | hsa-miR-4478 | chr9 | 132889520 | 132889526 | 7mer-m8 | 132889512 | 132889527 | 149 | -25.05 |
| ADediting_1453987 | chr9_132889523_+ | ENSG00000165698.16 | ENST00000372136.7 | SPACA9-203 | hsa-miR-4649-3p | chr9 | 132889517 | 132889523 | 7mer-m8 | 132889504 | 132889524 | 140 | -14.11 |
| ADediting_1453987 | chr9_132889523_+ | ENSG00000165698.16 | ENST00000372136.7 | SPACA9-203 | hsa-miR-7160-5p | chr9 | 132889518 | 132889524 | 7mer-m8 | 132889505 | 132889525 | 146 | -20.4 |
| ADediting_1453988 | chr9_132889535_+ | ENSG00000165698.16 | ENST00000356311.10 | SPACA9-202 | hsa-miR-5690 | chr9 | 132889532 | 132889538 | 7mer-m8 | 132889519 | 132889539 | 145 | -17.72 |
| ADediting_1453988 | chr9_132889535_+ | ENSG00000165698.16 | ENST00000372136.7 | SPACA9-203 | hsa-miR-5690 | chr9 | 132889532 | 132889538 | 7mer-m8 | 132889519 | 132889539 | 145 | -17.72 |
| ADediting_1453991 | chr9_132889598_+ | ENSG00000165698.16 | ENST00000356311.10 | SPACA9-202 | hsa-miR-4684-5p | chr9 | 132889595 | 132889601 | 7mer-m8 | 132889581 | 132889602 | 151 | -12.03 |
| ADediting_1453991 | chr9_132889598_+ | ENSG00000165698.16 | ENST00000372136.7 | SPACA9-203 | hsa-miR-4684-5p | chr9 | 132889595 | 132889601 | 7mer-m8 | 132889581 | 132889602 | 151 | -12.03 |
| ADediting_1453992 | chr9_132889658_+ | ENSG00000165698.16 | ENST00000356311.10 | SPACA9-202 | hsa-miR-363-5p | chr9 | 132889654 | 132889660 | 7mer-m8 | 132889641 | 132889661 | 154 | -24.88 |
| ADediting_1453992 | chr9_132889658_+ | ENSG00000165698.16 | ENST00000356311.10 | SPACA9-202 | hsa-miR-4800-5p | chr9 | 132889652 | 132889658 | 7mer-m8 | 132889634 | 132889659 | 147 | -23.92 |
| ADediting_1453992 | chr9_132889658_+ | ENSG00000165698.16 | ENST00000356311.10 | SPACA9-202 | hsa-miR-6745 | chr9 | 132889654 | 132889660 | 7mer-m8 | 132889637 | 132889661 | 153 | -27.18 |
| ADediting_1453992 | chr9_132889658_+ | ENSG00000165698.16 | ENST00000356311.10 | SPACA9-202 | hsa-miR-8071 | chr9 | 132889653 | 132889659 | 7mer-m8 | 132889641 | 132889660 | 154 | -22.65 |
| ADediting_1453992 | chr9_132889658_+ | ENSG00000165698.16 | ENST00000372136.7 | SPACA9-203 | hsa-miR-363-5p | chr9 | 132889654 | 132889660 | 7mer-m8 | 132889641 | 132889661 | 154 | -24.88 |
| ADediting_1453992 | chr9_132889658_+ | ENSG00000165698.16 | ENST00000372136.7 | SPACA9-203 | hsa-miR-4800-5p | chr9 | 132889652 | 132889658 | 7mer-m8 | 132889634 | 132889659 | 147 | -23.92 |
| ADediting_1453992 | chr9_132889658_+ | ENSG00000165698.16 | ENST00000372136.7 | SPACA9-203 | hsa-miR-6745 | chr9 | 132889654 | 132889660 | 7mer-m8 | 132889637 | 132889661 | 153 | -27.18 |
| ADediting_1453992 | chr9_132889658_+ | ENSG00000165698.16 | ENST00000372136.7 | SPACA9-203 | hsa-miR-8071 | chr9 | 132889653 | 132889659 | 7mer-m8 | 132889641 | 132889660 | 154 | -22.65 |
| ADediting_1453993 | chr9_132889676_+ | ENSG00000165698.16 | ENST00000356311.10 | SPACA9-202 | hsa-miR-887-5p | chr9 | 132889669 | 132889676 | 8mer-1a | 132889656 | 132889676 | 147 | -13.82 |
| ADediting_1453993 | chr9_132889676_+ | ENSG00000165698.16 | ENST00000372136.7 | SPACA9-203 | hsa-miR-887-5p | chr9 | 132889669 | 132889676 | 8mer-1a | 132889656 | 132889676 | 147 | -13.82 |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| Differentially expressed gene-miRNA network |
Top |
The effects of the RNA editing to the stability of the RNA structures for SPACA9 |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| ENST00000372136.7 | protein_coding |  |  |
| ENST00000356311.10 | protein_coding |  |  |
| RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| ADediting_1453970 | ENST00000372136.7 | chr9_132888848_+ | 1353 | -960.90 | -960.90 | -998.80 |
| ADediting_1453971 | ENST00000372136.7 | chr9_132888872_+ | 1377 | -961.90 | -960.90 | -998.80 |
| ADediting_1453972 | ENST00000372136.7 | chr9_132888894_+ | 1399 | -964.50 | -960.90 | -998.80 |
| ADediting_1453973 | ENST00000372136.7 | chr9_132888897_+ | 1402 | -964.20 | -960.90 | -998.80 |
| ADediting_1453974 | ENST00000372136.7 | chr9_132888907_+ | 1412 | -964.80 | -960.90 | -998.80 |
| ADediting_1453975 | ENST00000372136.7 | chr9_132888974_+ | 1479 | -963.70 | -960.90 | -998.80 |
| ADediting_1453976 | ENST00000372136.7 | chr9_132888978_+ | 1483 | -960.20 | -960.90 | -998.80 |
| ADediting_1453977 | ENST00000372136.7 | chr9_132888989_+ | 1494 | -960.90 | -960.90 | -998.80 |
| ADediting_1453978 | ENST00000372136.7 | chr9_132889031_+ | 1536 | -963.60 | -960.90 | -998.80 |
| ADediting_1453979 | ENST00000372136.7 | chr9_132889032_+ | 1537 | -964.20 | -960.90 | -998.80 |
| ADediting_1453980 | ENST00000372136.7 | chr9_132889044_+ | 1549 | -961.10 | -960.90 | -998.80 |
| ADediting_1453981 | ENST00000372136.7 | chr9_132889204_+ | 1709 | -967.50 | -960.90 | -998.80 |
| ADediting_1453982 | ENST00000372136.7 | chr9_132889438_+ | 1943 | -962.60 | -960.90 | -998.80 |
| ADediting_1453983 | ENST00000372136.7 | chr9_132889468_+ | 1973 | -961.80 | -960.90 | -998.80 |
| ADediting_1453984 | ENST00000372136.7 | chr9_132889493_+ | 1998 | -962.40 | -960.90 | -998.80 |
| ADediting_1453985 | ENST00000372136.7 | chr9_132889505_+ | 2010 | -966.60 | -960.90 | -998.80 |
| ADediting_1453986 | ENST00000372136.7 | chr9_132889506_+ | 2011 | -966.90 | -960.90 | -998.80 |
| ADediting_1453987 | ENST00000372136.7 | chr9_132889523_+ | 2028 | -963.10 | -960.90 | -998.80 |
| ADediting_1453988 | ENST00000372136.7 | chr9_132889535_+ | 2040 | -962.70 | -960.90 | -998.80 |
| ADediting_1453989 | ENST00000372136.7 | chr9_132889545_+ | 2050 | -965.70 | -960.90 | -998.80 |
| ADediting_1453990 | ENST00000372136.7 | chr9_132889595_+ | 2100 | -963.60 | -960.90 | -998.80 |
| ADediting_1453991 | ENST00000372136.7 | chr9_132889598_+ | 2103 | -961.50 | -960.90 | -998.80 |
| ADediting_1453992 | ENST00000372136.7 | chr9_132889658_+ | 2163 | -961.20 | -960.90 | -998.80 |
| ADediting_1453993 | ENST00000372136.7 | chr9_132889676_+ | 2181 | -963.60 | -960.90 | -998.80 |
| ADediting_1453994 | ENST00000372136.7 | chr9_132889677_+ | 2182 | -963.20 | -960.90 | -998.80 |
| ADediting_1453995 | ENST00000372136.7 | chr9_132889689_+ | 2194 | -960.90 | -960.90 | -998.80 |
| ADediting_1453970 | ENST00000356311.10 | chr9_132888848_+ | 1060 | -803.80 | -803.80 | -842.00 |
| ADediting_1453971 | ENST00000356311.10 | chr9_132888872_+ | 1084 | -804.70 | -803.80 | -842.00 |
| ADediting_1453972 | ENST00000356311.10 | chr9_132888894_+ | 1106 | -807.30 | -803.80 | -842.00 |
| ADediting_1453973 | ENST00000356311.10 | chr9_132888897_+ | 1109 | -806.90 | -803.80 | -842.00 |
| ADediting_1453974 | ENST00000356311.10 | chr9_132888907_+ | 1119 | -807.60 | -803.80 | -842.00 |
| ADediting_1453975 | ENST00000356311.10 | chr9_132888974_+ | 1186 | -805.70 | -803.80 | -842.00 |
| ADediting_1453976 | ENST00000356311.10 | chr9_132888978_+ | 1190 | -803.10 | -803.80 | -842.00 |
| ADediting_1453977 | ENST00000356311.10 | chr9_132888989_+ | 1201 | -803.80 | -803.80 | -842.00 |
| ADediting_1453978 | ENST00000356311.10 | chr9_132889031_+ | 1243 | -806.50 | -803.80 | -842.00 |
| ADediting_1453979 | ENST00000356311.10 | chr9_132889032_+ | 1244 | -807.00 | -803.80 | -842.00 |
| ADediting_1453980 | ENST00000356311.10 | chr9_132889044_+ | 1256 | -803.90 | -803.80 | -842.00 |
| ADediting_1453981 | ENST00000356311.10 | chr9_132889204_+ | 1416 | -810.40 | -803.80 | -842.00 |
| ADediting_1453982 | ENST00000356311.10 | chr9_132889438_+ | 1650 | -804.10 | -803.80 | -842.00 |
| ADediting_1453983 | ENST00000356311.10 | chr9_132889468_+ | 1680 | -804.70 | -803.80 | -842.00 |
| ADediting_1453984 | ENST00000356311.10 | chr9_132889493_+ | 1705 | -805.50 | -803.80 | -842.00 |
| ADediting_1453985 | ENST00000356311.10 | chr9_132889505_+ | 1717 | -809.80 | -803.80 | -842.00 |
| ADediting_1453986 | ENST00000356311.10 | chr9_132889506_+ | 1718 | -808.00 | -803.80 | -842.00 |
| ADediting_1453987 | ENST00000356311.10 | chr9_132889523_+ | 1735 | -804.90 | -803.80 | -842.00 |
| ADediting_1453988 | ENST00000356311.10 | chr9_132889535_+ | 1747 | -805.90 | -803.80 | -842.00 |
| ADediting_1453989 | ENST00000356311.10 | chr9_132889545_+ | 1757 | -806.80 | -803.80 | -842.00 |
| ADediting_1453990 | ENST00000356311.10 | chr9_132889595_+ | 1807 | -804.70 | -803.80 | -842.00 |
| ADediting_1453991 | ENST00000356311.10 | chr9_132889598_+ | 1810 | -804.30 | -803.80 | -842.00 |
| ADediting_1453992 | ENST00000356311.10 | chr9_132889658_+ | 1870 | -803.40 | -803.80 | -842.00 |
| ADediting_1453993 | ENST00000356311.10 | chr9_132889676_+ | 1888 | -804.70 | -803.80 | -842.00 |
| ADediting_1453994 | ENST00000356311.10 | chr9_132889677_+ | 1889 | -804.30 | -803.80 | -842.00 |
| ADediting_1453995 | ENST00000356311.10 | chr9_132889689_+ | 1901 | -804.10 | -803.80 | -842.00 |
| RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
Top |
Relation with ADAR for SPACA9 |
| Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | ADediting_1453963 | chr9_132881361_+ | 0.656670824695735 | 0.0253450448375614 | 0.108498184057049 | -0.0913350903255692 | 3.29481619069513e-16 | 0.441338046923492 |
| Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 1.38895316647578e-32 | 0.606937830084057 | 2.49188920810986e-35 | 0.627418907583823 | 2.21093501480452e-19 | 0.481322660073314 |
| AC | 5.00774755980346e-63 | 0.823633260395424 | 8.71805226384275e-35 | 0.676366658260467 | 1.09549851278704e-15 | 0.478152716296182 |
| PCC | 1.36742553152155e-22 | 0.63082376778292 | 1.47920431197908e-21 | 0.618627288227276 | 0.00128138952934599 | 0.231348849491408 |
| TCX | 3.3164299909085e-17 | 0.618568322172616 | 9.4922931257102e-08 | 0.41898638476368 | 0.00111079842216895 | 0.263723627388759 |
| FP | 1.40430195936505e-20 | 0.623749539664898 | 2.38387045568231e-07 | 0.375624171108991 | 2.30853963179538e-11 | 0.474124439139819 |
| IFG | 5.76703419331233e-06 | 0.77353890563337 | 0.000451515756778117 | 0.648753104272127 | 0.256803817827283 | 0.235647818317368 |
| PG | 2.67297918766449e-05 | 0.302719453766538 | 0.00425026505672961 | 0.208722616009415 | 8.03324820860861e-09 | 0.40718707386141 |
| STG | 1.29506328238557e-12 | 0.678724561334101 | 0.000168130817664153 | 0.399304968758014 | 0.003661286725235 | 0.31372077784554 |
Top |
Relation with AD stages for SPACA9 |
| Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| TCX | ADediting_1453989 | chr9_132889545_+ | 0.00121114742619949 | 0.310217253965341 |
| Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
Top |
RelatedDrugs for SPACA9 |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Top |
RelatedDiseases for SPACA9 |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
|