|
||||||
|
 | |
| |
| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
| |
| |
| The effects of the RNA editing to the stability of the RNA structures |
| |
| |
| |
|
Gene summary for MRPS30 |
 Gene summary |
| Gene information | Gene symbol | MRPS30 | Gene ID | 10884 |
| Gene name | mitochondrial ribosomal protein S30 | |
| Synonyms | MRP-S30|PAP|PDCD9|S30mt | |
| Cytomap | 5p12 | |
| Type of gene | protein-coding | |
| Description | 39S ribosomal protein S30, mitochondrial28S ribosomal protein S30, mitochondrialmitochondrial large ribosomal subunit protein mL65mitochondrial large ribosomal subunit protein mS30programmed cell death 9 | |
| Modification date | 20200313 | |
| UniProtAcc | Q9NP92, | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
Top |
RNA A-to-I events for MRPS30 |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA editing frequencies across three data sets. |
 |
| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA A-to-I editing events in AD. |
| ADediting_1203714(44815550, +), ADediting_1203715(44815551, +), ADediting_1203716(44815566, +), ADediting_1203717(44815567, +), ADediting_1203718(44815573, +), ADediting_1203719(44815575, +), ADediting_1203720(44815588, +), ADediting_1203721(44815589, +), ADediting_1203722(44815607, +), ADediting_1203723(44815612, +), ADediting_1203724(44815615, +), ADediting_1203725(44815623, +), ADediting_1203726(44815626, +), ADediting_1203727(44815636, +), ADediting_1203728(44815644, +), ADediting_1203729(44815646, +), ADediting_1203730(44815651, +), ADediting_1203731(44815662, +), ADediting_1203732(44815663, +), ADediting_1203733(44815666, +), ADediting_1203734(44815668, +), ADediting_1203735(44815669, +), ADediting_1203736(44815670, +), ADediting_1203737(44815671, +), ADediting_1203738(44815672, +), ADediting_1203739(44815675, +), ADediting_1203740(44815702, +), ADediting_1203741(44815707, +), ADediting_1203742(44815711, +), ADediting_1203743(44815724, +), ADediting_1203744(44815731, +), ADediting_1203745(44815734, +), ADediting_1203746(44815737, +), ADediting_1203747(44815742, +), ADediting_1203748(44815743, +), ADediting_1203749(44815754, +), ADediting_1203750(44815767, +), ADediting_1203751(44815768, +), ADediting_1203752(44815772, +), ADediting_1203753(44815792, +), ADediting_1203754(44816252, +), ADediting_1203755(44816260, +), ADediting_1203756(44816278, +), ADediting_1203757(44816281, +), ADediting_1203758(44816290, +), ADediting_1203759(44816303, +), ADediting_1203760(44816304, +), ADediting_1203761(44816321, +), ADediting_1203762(44816330, +), ADediting_1203763(44816347, +), ADediting_1203764(44816349, +), ADediting_1203765(44816353, +), ADediting_1203766(44816373, +), ADediting_1203767(44816374, +), ADediting_1203768(44816383, +), ADediting_1203769(44816387, +), ADediting_1203770(44816407, +), ADediting_1203771(44816416, +), ADediting_1203772(44816441, +), ADediting_1203773(44816450, +), ADediting_1203774(44816467, +), ADediting_1203775(44816468, +), ADediting_1203776(44816469, +), ADediting_1203777(44816481, +), ADediting_1203778(44816483, +), ADediting_1203779(44816490, +), ADediting_1203780(44819764, +), ADediting_1203781(44819781, +), ADediting_1203782(44819786, +), ADediting_1203783(44819793, +), ADediting_1203784(44819807, +), ADediting_1203785(44819810, +), ADediting_1203786(44819856, +), ADediting_1203787(44819883, +), ADediting_1203788(44819890, +), ADediting_1203789(44819902, +), ADediting_1203790(44819927, +), ADediting_1203791(44819928, +), ADediting_1203792(44819954, +), ADediting_1581588(44815583, +), ADediting_1581589(44815621, +), ADediting_1581590(44815638, +), ADediting_1581591(44815643, +), ADediting_1581592(44815645, +), ADediting_1581593(44815657, +), ADediting_1581594(44815664, +), ADediting_1581595(44815701, +), ADediting_1581596(44819824, +), ADediting_1656963(44815730, +), ADediting_1656964(44816273, +), ADediting_1656965(44816308, +), |
Top |
RNA editing positional annotations for MRPS30 using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_1203714 | chr5_44815550_+ | downstream |
| ADediting_1203715 | chr5_44815551_+ | downstream |
| ADediting_1203716 | chr5_44815566_+ | downstream |
| ADediting_1203717 | chr5_44815567_+ | downstream |
| ADediting_1203718 | chr5_44815573_+ | downstream |
| ADediting_1203719 | chr5_44815575_+ | downstream |
| ADediting_1203720 | chr5_44815588_+ | downstream |
| ADediting_1203721 | chr5_44815589_+ | downstream |
| ADediting_1203722 | chr5_44815607_+ | downstream |
| ADediting_1203723 | chr5_44815612_+ | downstream |
| ADediting_1203724 | chr5_44815615_+ | downstream |
| ADediting_1203725 | chr5_44815623_+ | downstream |
| ADediting_1203726 | chr5_44815626_+ | downstream |
| ADediting_1203727 | chr5_44815636_+ | downstream |
| ADediting_1203728 | chr5_44815644_+ | downstream |
| ADediting_1203729 | chr5_44815646_+ | downstream |
| ADediting_1203730 | chr5_44815651_+ | downstream |
| ADediting_1203731 | chr5_44815662_+ | downstream |
| ADediting_1203732 | chr5_44815663_+ | downstream |
| ADediting_1203733 | chr5_44815666_+ | downstream |
| ADediting_1203734 | chr5_44815668_+ | downstream |
| ADediting_1203735 | chr5_44815669_+ | downstream |
| ADediting_1203736 | chr5_44815670_+ | downstream |
| ADediting_1203737 | chr5_44815671_+ | downstream |
| ADediting_1203738 | chr5_44815672_+ | downstream |
| ADediting_1203739 | chr5_44815675_+ | downstream |
| ADediting_1203740 | chr5_44815702_+ | downstream |
| ADediting_1203741 | chr5_44815707_+ | downstream |
| ADediting_1203742 | chr5_44815711_+ | downstream |
| ADediting_1203743 | chr5_44815724_+ | downstream |
| ADediting_1203744 | chr5_44815731_+ | downstream |
| ADediting_1203745 | chr5_44815734_+ | downstream |
| ADediting_1203746 | chr5_44815737_+ | downstream |
| ADediting_1203747 | chr5_44815742_+ | downstream |
| ADediting_1203748 | chr5_44815743_+ | downstream |
| ADediting_1203749 | chr5_44815754_+ | downstream |
| ADediting_1203750 | chr5_44815767_+ | downstream |
| ADediting_1203751 | chr5_44815768_+ | downstream |
| ADediting_1203752 | chr5_44815772_+ | downstream |
| ADediting_1203753 | chr5_44815792_+ | downstream |
| ADediting_1203754 | chr5_44816252_+ | downstream |
| ADediting_1203755 | chr5_44816260_+ | downstream |
| ADediting_1203756 | chr5_44816278_+ | downstream |
| ADediting_1203757 | chr5_44816281_+ | downstream |
| ADediting_1203758 | chr5_44816290_+ | downstream |
| ADediting_1203759 | chr5_44816303_+ | downstream |
| ADediting_1203760 | chr5_44816304_+ | downstream |
| ADediting_1203761 | chr5_44816321_+ | downstream |
| ADediting_1203762 | chr5_44816330_+ | downstream |
| ADediting_1203763 | chr5_44816347_+ | downstream |
| ADediting_1203764 | chr5_44816349_+ | downstream |
| ADediting_1203765 | chr5_44816353_+ | downstream |
| ADediting_1203766 | chr5_44816373_+ | downstream |
| ADediting_1203767 | chr5_44816374_+ | downstream |
| ADediting_1203768 | chr5_44816383_+ | downstream |
| ADediting_1203769 | chr5_44816387_+ | downstream |
| ADediting_1203770 | chr5_44816407_+ | downstream |
| ADediting_1203771 | chr5_44816416_+ | downstream |
| ADediting_1203772 | chr5_44816441_+ | downstream |
| ADediting_1203773 | chr5_44816450_+ | downstream |
| ADediting_1203774 | chr5_44816467_+ | downstream |
| ADediting_1203775 | chr5_44816468_+ | downstream |
| ADediting_1203776 | chr5_44816469_+ | downstream |
| ADediting_1203777 | chr5_44816481_+ | downstream |
| ADediting_1203778 | chr5_44816483_+ | downstream |
| ADediting_1203779 | chr5_44816490_+ | downstream |
| ADediting_1203780 | chr5_44819764_+ | intergenic |
| ADediting_1203781 | chr5_44819781_+ | intergenic |
| ADediting_1203782 | chr5_44819786_+ | intergenic |
| ADediting_1203783 | chr5_44819793_+ | intergenic |
| ADediting_1203784 | chr5_44819807_+ | intergenic |
| ADediting_1203785 | chr5_44819810_+ | intergenic |
| ADediting_1203786 | chr5_44819856_+ | intergenic |
| ADediting_1203787 | chr5_44819883_+ | intergenic |
| ADediting_1203788 | chr5_44819890_+ | intergenic |
| ADediting_1203789 | chr5_44819902_+ | intergenic |
| ADediting_1203790 | chr5_44819927_+ | intergenic |
| ADediting_1203791 | chr5_44819928_+ | intergenic |
| ADediting_1203792 | chr5_44819954_+ | intergenic |
| ADediting_1581588 | chr5_44815583_+ | downstream |
| ADediting_1581589 | chr5_44815621_+ | downstream |
| ADediting_1581590 | chr5_44815638_+ | downstream |
| ADediting_1581591 | chr5_44815643_+ | downstream |
| ADediting_1581592 | chr5_44815645_+ | downstream |
| ADediting_1581593 | chr5_44815657_+ | downstream |
| ADediting_1581594 | chr5_44815664_+ | downstream |
| ADediting_1581595 | chr5_44815701_+ | downstream |
| ADediting_1581596 | chr5_44819824_+ | intergenic |
| ADediting_1656963 | chr5_44815730_+ | downstream |
| ADediting_1656964 | chr5_44816273_+ | downstream |
| ADediting_1656965 | chr5_44816308_+ | downstream |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_1203714 | chr5_44815550_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1203715 | chr5_44815551_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1203716 | chr5_44815566_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1203717 | chr5_44815567_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1203718 | chr5_44815573_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1203719 | chr5_44815575_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1203720 | chr5_44815588_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1203721 | chr5_44815589_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1203722 | chr5_44815607_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1203723 | chr5_44815612_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1203724 | chr5_44815615_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1203725 | chr5_44815623_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1203726 | chr5_44815626_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1203727 | chr5_44815636_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1203728 | chr5_44815644_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1203729 | chr5_44815646_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1203730 | chr5_44815651_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1203731 | chr5_44815662_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1203732 | chr5_44815663_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1203733 | chr5_44815666_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1203734 | chr5_44815668_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1203735 | chr5_44815669_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1203736 | chr5_44815670_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1203737 | chr5_44815671_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1203738 | chr5_44815672_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1203739 | chr5_44815675_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1203740 | chr5_44815702_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1203741 | chr5_44815707_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1203742 | chr5_44815711_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1203743 | chr5_44815724_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1203744 | chr5_44815731_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1203745 | chr5_44815734_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1203746 | chr5_44815737_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1203747 | chr5_44815742_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1203748 | chr5_44815743_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1203749 | chr5_44815754_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1203750 | chr5_44815767_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1203751 | chr5_44815768_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1203752 | chr5_44815772_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1203753 | chr5_44815792_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1203754 | chr5_44816252_+ | SINE | Alu | Name=AluSp |
| ADediting_1203755 | chr5_44816260_+ | SINE | Alu | Name=AluSp |
| ADediting_1203756 | chr5_44816278_+ | SINE | Alu | Name=AluSp |
| ADediting_1203757 | chr5_44816281_+ | SINE | Alu | Name=AluSp |
| ADediting_1203758 | chr5_44816290_+ | SINE | Alu | Name=AluSp |
| ADediting_1203759 | chr5_44816303_+ | SINE | Alu | Name=AluSp |
| ADediting_1203760 | chr5_44816304_+ | SINE | Alu | Name=AluSp |
| ADediting_1203761 | chr5_44816321_+ | SINE | Alu | Name=AluSp |
| ADediting_1203762 | chr5_44816330_+ | SINE | Alu | Name=AluSp |
| ADediting_1203763 | chr5_44816347_+ | SINE | Alu | Name=AluSp |
| ADediting_1203764 | chr5_44816349_+ | SINE | Alu | Name=AluSp |
| ADediting_1203765 | chr5_44816353_+ | SINE | Alu | Name=AluSp |
| ADediting_1203766 | chr5_44816373_+ | SINE | Alu | Name=AluSp |
| ADediting_1203767 | chr5_44816374_+ | SINE | Alu | Name=AluSp |
| ADediting_1203768 | chr5_44816383_+ | SINE | Alu | Name=AluSp |
| ADediting_1203769 | chr5_44816387_+ | SINE | Alu | Name=AluSp |
| ADediting_1203770 | chr5_44816407_+ | SINE | Alu | Name=AluSp |
| ADediting_1203771 | chr5_44816416_+ | SINE | Alu | Name=AluSp |
| ADediting_1203772 | chr5_44816441_+ | SINE | Alu | Name=AluSp |
| ADediting_1203773 | chr5_44816450_+ | SINE | Alu | Name=AluSp |
| ADediting_1203774 | chr5_44816467_+ | SINE | Alu | Name=AluSp |
| ADediting_1203775 | chr5_44816468_+ | SINE | Alu | Name=AluSp |
| ADediting_1203776 | chr5_44816469_+ | SINE | Alu | Name=AluSp |
| ADediting_1203777 | chr5_44816481_+ | SINE | Alu | Name=AluSp |
| ADediting_1203778 | chr5_44816483_+ | SINE | Alu | Name=AluSp |
| ADediting_1203779 | chr5_44816490_+ | SINE | Alu | Name=AluSp |
| ADediting_1203780 | chr5_44819764_+ | SINE | Alu | Name=AluSz |
| ADediting_1203781 | chr5_44819781_+ | SINE | Alu | Name=AluSz |
| ADediting_1203782 | chr5_44819786_+ | SINE | Alu | Name=AluSz |
| ADediting_1203783 | chr5_44819793_+ | SINE | Alu | Name=AluSz |
| ADediting_1203784 | chr5_44819807_+ | SINE | Alu | Name=AluSz |
| ADediting_1203785 | chr5_44819810_+ | SINE | Alu | Name=AluSz |
| ADediting_1203786 | chr5_44819856_+ | SINE | Alu | Name=AluSz |
| ADediting_1203787 | chr5_44819883_+ | SINE | Alu | Name=AluSz |
| ADediting_1203788 | chr5_44819890_+ | SINE | Alu | Name=AluSz |
| ADediting_1203789 | chr5_44819902_+ | SINE | Alu | Name=AluSz |
| ADediting_1203790 | chr5_44819927_+ | SINE | Alu | Name=AluSz |
| ADediting_1203791 | chr5_44819928_+ | SINE | Alu | Name=AluSz |
| ADediting_1203792 | chr5_44819954_+ | SINE | Alu | Name=AluSz |
| ADediting_1581588 | chr5_44815583_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1581589 | chr5_44815621_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1581590 | chr5_44815638_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1581591 | chr5_44815643_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1581592 | chr5_44815645_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1581593 | chr5_44815657_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1581594 | chr5_44815664_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1581595 | chr5_44815701_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1581596 | chr5_44819824_+ | SINE | Alu | Name=AluSz |
| ADediting_1656963 | chr5_44815730_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1656964 | chr5_44816273_+ | SINE | Alu | Name=AluSp |
| ADediting_1656965 | chr5_44816308_+ | SINE | Alu | Name=AluSp |
Top |
RNA A-to-I editing events in the alternative splicing sites for MRPS30 |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
Top |
Differntial gene expression between RNA A-to-I edited versus non-edited samples for MRPS30 |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
 | |
 | |
 | |
 | |
 | |
 | |
 | |
 | |
| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
Top |
Protein coding region RNA A-to-I editings for MRPS30 |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
Top |
The effects of the RNA editing to the miRNA binding sites for MRPS30 |
| RNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. |
 |
| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1203715 | chr5_44815551_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-3130-3p | chr5 | 44815545 | 44815551 | 7mer-m8 | 44815529 | 44815552 | 149 | -22.69 |
| ADediting_1203715 | chr5_44815551_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-324-3p | chr5 | 44815548 | 44815554 | 7mer-m8 | 44815532 | 44815555 | 170 | -34.39 |
| ADediting_1203715 | chr5_44815551_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-4252 | chr5 | 44815549 | 44815555 | 7mer-m8 | 44815537 | 44815556 | 154 | -22.79 |
| ADediting_1203773 | chr5_44816450_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-1228-5p | chr5 | 44816448 | 44816454 | 7mer-m8 | 44815555 | 44816455 | 162 | -33.11 |
| ADediting_1203774 | chr5_44816467_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-6771-5p | chr5 | 44816462 | 44816469 | 8mer-1a | 44816448 | 44816469 | 151 | -24.79 |
| ADediting_1203775 | chr5_44816468_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-326 | chr5 | 44816464 | 44816470 | 7mer-m8 | 44816452 | 44816471 | 140 | -13.37 |
| ADediting_1203775 | chr5_44816468_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-330-5p | chr5 | 44816464 | 44816470 | 7mer-m8 | 44816450 | 44816471 | 140 | -20.32 |
| ADediting_1203775 | chr5_44816468_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-4314 | chr5 | 44816463 | 44816469 | 7mer-m8 | 44816453 | 44816470 | 140 | -21.18 |
| ADediting_1203775 | chr5_44816468_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-514a-5p | chr5 | 44816465 | 44816471 | 7mer-m8 | 44816449 | 44816472 | 146 | -18.62 |
| ADediting_1203776 | chr5_44816469_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-3189-3p | chr5 | 44816464 | 44816470 | 7mer-m8 | 44816448 | 44816471 | 153 | -24.71 |
| ADediting_1203776 | chr5_44816469_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-6813-3p | chr5 | 44816465 | 44816471 | 7mer-m8 | 44816452 | 44816472 | 140 | -11.6 |
| ADediting_1203778 | chr5_44816483_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-100-5p | chr5 | 44816480 | 44816486 | 7mer-m8 | 44816465 | 44816487 | 162 | -22.89 |
| ADediting_1203778 | chr5_44816483_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-99a-5p | chr5 | 44816480 | 44816486 | 7mer-m8 | 44816464 | 44816487 | 155 | -21.46 |
| ADediting_1203778 | chr5_44816483_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-99b-5p | chr5 | 44816480 | 44816486 | 7mer-m8 | 44816464 | 44816487 | 155 | -25.13 |
| ADediting_1203779 | chr5_44816490_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-663b | chr5 | 44816489 | 44816495 | 7mer-m8 | 44816475 | 44816496 | 147 | -24.56 |
| ADediting_1203780 | chr5_44819764_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-383-3p | chr5 | 44819761 | 44819767 | 7mer-m8 | 44819747 | 44819768 | 156 | -24.23 |
| ADediting_1203782 | chr5_44819786_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-6089 | chr5 | 44819785 | 44819791 | 7mer-m8 | 44819769 | 44819792 | 169 | -38.13 |
| ADediting_1203783 | chr5_44819793_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-25-5p | chr5 | 44819789 | 44819795 | 7mer-m8 | 44819772 | 44819796 | 149 | -24 |
| ADediting_1203783 | chr5_44819793_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-658 | chr5 | 44819788 | 44819794 | 7mer-m8 | 44819769 | 44819795 | 153 | -28.47 |
| ADediting_1203784 | chr5_44819807_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-3140-5p | chr5 | 44819802 | 44819808 | 7mer-m8 | 44819791 | 44819809 | 156 | -14.54 |
| ADediting_1203784 | chr5_44819807_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-5187-3p | chr5 | 44819801 | 44819807 | 7mer-m8 | 44819788 | 44819808 | 145 | -11.7 |
| ADediting_1203786 | chr5_44819856_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-4442 | chr5 | 44819851 | 44819857 | 7mer-m8 | 44819842 | 44819858 | 146 | -21.92 |
| ADediting_1203787 | chr5_44819883_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-548as-3p | chr5 | 44819882 | 44819888 | 7mer-m8 | 44819867 | 44819889 | 146 | -9.47 |
| ADediting_1203787 | chr5_44819883_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-660-5p | chr5 | 44819879 | 44819885 | 7mer-m8 | 44819865 | 44819886 | 141 | -10.24 |
| ADediting_1203789 | chr5_44819902_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-3940-3p | chr5 | 44819900 | 44819906 | 7mer-m8 | 44819889 | 44819907 | 144 | -24.53 |
| ADediting_1203791 | chr5_44819928_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-3622a-3p | chr5 | 44819925 | 44819932 | 8mer-1a | 44819911 | 44819932 | 144 | -13.55 |
| ADediting_1203791 | chr5_44819928_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-3622b-3p | chr5 | 44819925 | 44819932 | 8mer-1a | 44819912 | 44819932 | 153 | -19.33 |
| ADediting_1203791 | chr5_44819928_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-544b | chr5 | 44819923 | 44819929 | 7mer-m8 | 44819910 | 44819930 | 157 | -19.04 |
| ADediting_1203791 | chr5_44819928_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-7162-3p | chr5 | 44819922 | 44819928 | 7mer-m8 | 44819909 | 44819929 | 142 | -17.47 |
| ADediting_1203792 | chr5_44819954_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-3189-3p | chr5 | 44819949 | 44819955 | 7mer-m8 | 44819933 | 44819956 | 144 | -22.22 |
| ADediting_1581596 | chr5_44819824_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-6089 | chr5 | 44819823 | 44819829 | 7mer-m8 | 44819807 | 44819830 | 164 | -37.06 |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1203714 | chr5_44815550_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-32-5p | chr5 | 44815546 | 44815552 | 7mer-m8 | 44815531 | 44815553 | 147 | -18.09 |
| ADediting_1203714 | chr5_44815550_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-363-3p | chr5 | 44815546 | 44815552 | 7mer-m8 | 44815537 | 44815553 | 142 | -16.75 |
| ADediting_1203714 | chr5_44815550_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-367-3p | chr5 | 44815546 | 44815552 | 7mer-m8 | 44815530 | 44815553 | 154 | -17.15 |
| ADediting_1203714 | chr5_44815550_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-500a-3p | chr5 | 44815545 | 44815551 | 7mer-1a | 44815527 | 44815551 | 142 | -20.8 |
| ADediting_1203714 | chr5_44815550_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-92a-3p | chr5 | 44815546 | 44815552 | 7mer-m8 | 44815532 | 44815553 | 145 | -18.9 |
| ADediting_1203714 | chr5_44815550_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-92b-3p | chr5 | 44815546 | 44815552 | 7mer-m8 | 44815532 | 44815553 | 149 | -18.7 |
| ADediting_1203715 | chr5_44815551_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-32-5p | chr5 | 44815546 | 44815552 | 7mer-m8 | 44815531 | 44815553 | 147 | -18.09 |
| ADediting_1203715 | chr5_44815551_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-363-3p | chr5 | 44815546 | 44815552 | 7mer-m8 | 44815537 | 44815553 | 142 | -16.75 |
| ADediting_1203715 | chr5_44815551_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-367-3p | chr5 | 44815546 | 44815552 | 7mer-m8 | 44815530 | 44815553 | 154 | -17.15 |
| ADediting_1203715 | chr5_44815551_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-92a-3p | chr5 | 44815546 | 44815552 | 7mer-m8 | 44815532 | 44815553 | 145 | -18.9 |
| ADediting_1203715 | chr5_44815551_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-92b-3p | chr5 | 44815546 | 44815552 | 7mer-m8 | 44815532 | 44815553 | 149 | -18.7 |
| ADediting_1203773 | chr5_44816450_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-3165 | chr5 | 44816446 | 44816452 | 7mer-m8 | 44815551 | 44816453 | 150 | -17.86 |
| ADediting_1203773 | chr5_44816450_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-6745 | chr5 | 44816447 | 44816454 | 8mer-1a | 44815554 | 44816454 | 154 | -22.8 |
| ADediting_1203773 | chr5_44816450_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-6748-5p | chr5 | 44816449 | 44816455 | 7mer-m8 | 44815553 | 44816456 | 149 | -23.57 |
| ADediting_1203774 | chr5_44816467_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-30b-3p | chr5 | 44816461 | 44816468 | 8mer-1a | 44816447 | 44816468 | 155 | -18.05 |
| ADediting_1203774 | chr5_44816467_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-3689a-3p | chr5 | 44816461 | 44816468 | 8mer-1a | 44816447 | 44816468 | 145 | -21.61 |
| ADediting_1203774 | chr5_44816467_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-3689b-3p | chr5 | 44816461 | 44816468 | 8mer-1a | 44816447 | 44816468 | 145 | -21.66 |
| ADediting_1203774 | chr5_44816467_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-3689c | chr5 | 44816461 | 44816468 | 8mer-1a | 44816447 | 44816468 | 145 | -21.66 |
| ADediting_1203774 | chr5_44816467_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-6779-5p | chr5 | 44816461 | 44816468 | 8mer-1a | 44816445 | 44816468 | 151 | -24.22 |
| ADediting_1203774 | chr5_44816467_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-6780a-5p | chr5 | 44816461 | 44816468 | 8mer-1a | 44816445 | 44816468 | 148 | -20.23 |
| ADediting_1203774 | chr5_44816467_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-887-5p | chr5 | 44816462 | 44816469 | 8mer-1a | 44816449 | 44816469 | 147 | -13.82 |
| ADediting_1203775 | chr5_44816468_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-887-5p | chr5 | 44816462 | 44816469 | 8mer-1a | 44816449 | 44816469 | 147 | -13.82 |
| ADediting_1203779 | chr5_44816490_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-4284 | chr5 | 44816487 | 44816494 | 8mer-1a | 44816477 | 44816494 | 151 | -19.56 |
| ADediting_1203780 | chr5_44819764_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-101-3p | chr5 | 44819762 | 44819768 | 7mer-m8 | 44819750 | 44819769 | 151 | -16.57 |
| ADediting_1203781 | chr5_44819781_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-6807-5p | chr5 | 44819775 | 44819781 | 7mer-m8 | 44819761 | 44819782 | 141 | -18.61 |
| ADediting_1203782 | chr5_44819786_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-17-3p | chr5 | 44819781 | 44819787 | 7mer-m8 | 44819768 | 44819788 | 153 | -17.56 |
| ADediting_1203782 | chr5_44819786_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-485-5p | chr5 | 44819785 | 44819791 | 7mer-m8 | 44819772 | 44819792 | 153 | -17.86 |
| ADediting_1203782 | chr5_44819786_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-6884-5p | chr5 | 44819785 | 44819791 | 7mer-m8 | 44819770 | 44819792 | 146 | -20.16 |
| ADediting_1203783 | chr5_44819793_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-12114 | chr5 | 44819790 | 44819796 | 7mer-m8 | 44819775 | 44819797 | 155 | -25.76 |
| ADediting_1203783 | chr5_44819793_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-4443 | chr5 | 44819787 | 44819793 | 7mer-m8 | 44819777 | 44819794 | 143 | -17.78 |
| ADediting_1203783 | chr5_44819793_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-7847-3p | chr5 | 44819788 | 44819794 | 7mer-m8 | 44819773 | 44819795 | 146 | -20.12 |
| ADediting_1203786 | chr5_44819856_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-1207-3p | chr5 | 44819854 | 44819861 | 8mer-1a | 44819844 | 44819861 | 144 | -15.42 |
| ADediting_1203786 | chr5_44819856_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-4638-3p | chr5 | 44819851 | 44819857 | 7mer-m8 | 44819835 | 44819858 | 145 | -22.83 |
| ADediting_1203787 | chr5_44819883_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-5696 | chr5 | 44819877 | 44819883 | 7mer-m8 | 44819861 | 44819884 | 145 | -12.5 |
| ADediting_1203789 | chr5_44819902_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-3190-5p | chr5 | 44819897 | 44819903 | 7mer-m8 | 44819885 | 44819904 | 147 | -18.34 |
| ADediting_1203789 | chr5_44819902_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-548s | chr5 | 44819896 | 44819902 | 7mer-m8 | 44819877 | 44819903 | 147 | -12.43 |
| ADediting_1581596 | chr5_44819824_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-4478 | chr5 | 44819822 | 44819828 | 7mer-m8 | 44819814 | 44819829 | 149 | -25.05 |
| ADediting_1581596 | chr5_44819824_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-4649-3p | chr5 | 44819819 | 44819825 | 7mer-m8 | 44819806 | 44819826 | 140 | -15.87 |
| ADediting_1581596 | chr5_44819824_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-485-5p | chr5 | 44819823 | 44819829 | 7mer-m8 | 44819809 | 44819830 | 153 | -20.11 |
| ADediting_1581596 | chr5_44819824_+ | ENSG00000112996.11 | ENST00000230914.4 | MRPS30-201 | hsa-miR-7160-5p | chr5 | 44819820 | 44819826 | 7mer-m8 | 44819805 | 44819827 | 149 | -20.61 |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1535953 | chr14_101045971_+ | ENSG00000112996.11 | ENST00000507110.6 | MRPS30-202 | hsa-miR-381-3p | chr5 | 44815413 | 44815419 | 7mer-1a | 44815398 | 44815419 | 141 | -12.62 |
| ADediting_1535954 | chr14_101045974_+ | ENSG00000112996.11 | ENST00000507110.6 | MRPS30-202 | hsa-miR-381-3p | chr5 | 44815413 | 44815419 | 7mer-1a | 44815398 | 44815419 | 141 | -12.62 |
| Differentially expressed gene-miRNA network |
| Differentially expressed lncRNA-miRNA network |
 |
Top |
The effects of the RNA editing to the stability of the RNA structures for MRPS30 |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| ENST00000230914.4 | lncRNA |  |  |
| RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| ADediting_1203714 | ENST00000230914.4 | chr5_44815550_+ | 332 | -1071.40 | -1072.10 | -1103.10 |
| ADediting_1203715 | ENST00000230914.4 | chr5_44815551_+ | 333 | -1078.30 | -1072.10 | -1103.10 |
| ADediting_1203773 | ENST00000230914.4 | chr5_44816450_+ | 353 | -1072.30 | -1072.10 | -1103.10 |
| ADediting_1203774 | ENST00000230914.4 | chr5_44816467_+ | 370 | -1077.70 | -1072.10 | -1103.10 |
| ADediting_1203775 | ENST00000230914.4 | chr5_44816468_+ | 371 | -1074.00 | -1072.10 | -1103.10 |
| ADediting_1203776 | ENST00000230914.4 | chr5_44816469_+ | 372 | -1078.30 | -1072.10 | -1103.10 |
| ADediting_1203777 | ENST00000230914.4 | chr5_44816481_+ | 384 | -1071.10 | -1072.10 | -1103.10 |
| ADediting_1203778 | ENST00000230914.4 | chr5_44816483_+ | 386 | -1071.40 | -1072.10 | -1103.10 |
| ADediting_1203779 | ENST00000230914.4 | chr5_44816490_+ | 393 | -1071.20 | -1072.10 | -1103.10 |
| ADediting_1203780 | ENST00000230914.4 | chr5_44819764_+ | 3667 | -1074.70 | -1072.10 | -1103.10 |
| ADediting_1203781 | ENST00000230914.4 | chr5_44819781_+ | 3684 | -1072.10 | -1072.10 | -1103.10 |
| ADediting_1203782 | ENST00000230914.4 | chr5_44819786_+ | 3689 | -1072.10 | -1072.10 | -1103.10 |
| ADediting_1203783 | ENST00000230914.4 | chr5_44819793_+ | 3696 | -1071.70 | -1072.10 | -1103.10 |
| ADediting_1203784 | ENST00000230914.4 | chr5_44819807_+ | 3710 | -1076.00 | -1072.10 | -1103.10 |
| ADediting_1203785 | ENST00000230914.4 | chr5_44819810_+ | 3713 | -1073.00 | -1072.10 | -1103.10 |
| ADediting_1581596 | ENST00000230914.4 | chr5_44819824_+ | 3727 | -1074.10 | -1072.10 | -1103.10 |
| ADediting_1203786 | ENST00000230914.4 | chr5_44819856_+ | 3759 | -1072.00 | -1072.10 | -1103.10 |
| ADediting_1203787 | ENST00000230914.4 | chr5_44819883_+ | 3786 | -1072.10 | -1072.10 | -1103.10 |
| ADediting_1203788 | ENST00000230914.4 | chr5_44819890_+ | 3793 | -1072.80 | -1072.10 | -1103.10 |
| ADediting_1203789 | ENST00000230914.4 | chr5_44819902_+ | 3805 | -1072.10 | -1072.10 | -1103.10 |
| ADediting_1203790 | ENST00000230914.4 | chr5_44819927_+ | 3830 | -1071.80 | -1072.10 | -1103.10 |
| ADediting_1203791 | ENST00000230914.4 | chr5_44819928_+ | 3831 | -1072.10 | -1072.10 | -1103.10 |
| ADediting_1203792 | ENST00000230914.4 | chr5_44819954_+ | 3857 | -1073.90 | -1072.10 | -1103.10 |
Top |
Relation with ADAR for MRPS30 |
| Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | ADediting_1203715 | chr5_44815551_+ | 4.36430264766592e-08 | 0.30478506368657 | 0.00529136115644349 | 0.158031691139402 | 0.933681997396312 | -0.0047453369946994 |
| CER | ADediting_1203715 | chr5_44815551_+ | 2.68778721265528e-07 | 0.405243931676274 | 1.50086601113463e-06 | 0.381087496806139 | 9.74709938157278e-06 | 0.352406934911611 |
| CER | ADediting_1203716 | chr5_44815566_+ | 7.85262424341476e-05 | 0.316731039478074 | 0.000530264375099039 | 0.279589904863061 | 0.00102659203933585 | 0.265461352932842 |
| DLPFC | ADediting_1203718 | chr5_44815573_+ | 1.03032175063344e-08 | 0.318000173182425 | 5.38129760337631e-05 | 0.227276182265863 | 0.213452814384241 | 0.0708590682721059 |
| CER | ADediting_1203718 | chr5_44815573_+ | 1.65259335545829e-16 | 0.60764143384396 | 1.33876299863902e-16 | 0.609098545342846 | 9.34562182262051e-06 | 0.353083062128062 |
| TCX | ADediting_1203718 | chr5_44815573_+ | 2.04066830587462e-05 | 0.340268468146718 | 0.124983098932878 | 0.125820224535185 | 0.0343678935298919 | 0.172891741660286 |
| CER | ADediting_1203720 | chr5_44815588_+ | 8.77958205248575e-12 | 0.520372726559346 | 1.83591446072336e-14 | 0.572962573696053 | 0.00127359838248914 | 0.260681143137336 |
| TCX | ADediting_1203720 | chr5_44815588_+ | 2.09940603452594e-05 | 0.339792093819327 | 7.765885767513e-06 | 0.35604128702394 | 0.0790995478697265 | -0.143828257505085 |
| IFG | ADediting_1203723 | chr5_44815612_+ | 0.751207357060133 | 0.0667564671094852 | 0.76553391897524 | 0.062800631837835 | 0.00696227513172583 | 0.525658428401746 |
| STG | ADediting_1203725 | chr5_44815623_+ | 0.48880251970544 | -0.0765630552606693 | 0.531408914697745 | -0.0692420490472264 | 0.00281153824916702 | 0.322069415251864 |
| CER | ADediting_1203726 | chr5_44815626_+ | 0.000168008000641296 | 0.3025323534633 | 2.76832576434622e-08 | 0.434501623817059 | 0.348956987825207 | 0.077004792918949 |
| CER | ADediting_1203730 | chr5_44815651_+ | 1.10331611184145e-06 | 0.385552980812303 | 1.45487578222099e-09 | 0.468720419255159 | 0.0095804544606348 | 0.210902418129262 |
| CER | ADediting_1203733 | chr5_44815666_+ | 2.24093334463626e-11 | 0.511525569043223 | 1.62508455875793e-13 | 0.555407276810074 | 0.008683171830869 | 0.213580169249167 |
| CER | ADediting_1203735 | chr5_44815669_+ | 2.13714749989437e-10 | 0.489130731959471 | 8.61380515989328e-11 | 0.498350550176117 | 0.0020367130444063 | 0.249955391784059 |
| TCX | ADediting_1203735 | chr5_44815669_+ | 2.24770024251047e-05 | 0.338643106821882 | 0.369357777956837 | 0.0738124491563433 | 4.08575428099978e-05 | 0.328383541293655 |
| IFG | ADediting_1203735 | chr5_44815669_+ | 0.543948576180939 | 0.127396599626964 | 0.362886551589723 | 0.190038864789258 | 0.00719271455810238 | 0.523866682964641 |
| CER | ADediting_1203739 | chr5_44815675_+ | 2.49755793043613e-12 | 0.531854281896745 | 1.0959651477987e-15 | 0.594207545387348 | 0.000568010731989579 | 0.278153787304273 |
| IFG | ADediting_1203739 | chr5_44815675_+ | 0.635041980092016 | 0.0998002556801203 | 0.606414951323187 | 0.108279204438196 | 0.00221449318711209 | 0.583198039162852 |
| CER | ADediting_1203744 | chr5_44815731_+ | 3.0586680024033e-07 | 0.403493469740018 | 2.42606576215551e-10 | 0.487822095091776 | 0.0815868078543482 | 0.142662322868869 |
| TCX | ADediting_1203744 | chr5_44815731_+ | 0.000817847758566106 | 0.270408639919732 | 1.9994946773299e-07 | 0.409212760922229 | 0.0243429063266812 | -0.183816631603904 |
| CER | ADediting_1203746 | chr5_44815737_+ | 2.95555278572672e-08 | 0.433696909929101 | 1.86717243887454e-10 | 0.490518441129947 | 0.00137691496946941 | 0.258929892352601 |
| TCX | ADediting_1203746 | chr5_44815737_+ | 0.00144204004168556 | 0.25788668105923 | 2.8209619393703e-05 | 0.334785801828325 | 0.348754813081452 | -0.0770370052182631 |
| CER | ADediting_1203749 | chr5_44815754_+ | 1.95445623698312e-09 | 0.465456597059527 | 1.48082040142498e-12 | 0.53650407119413 | 0.0418011381087717 | 0.166428743466147 |
| CER | ADediting_1203754 | chr5_44816252_+ | 1.05424342029646e-16 | 0.610742613827923 | 9.72635026519896e-15 | 0.577887503929092 | 0.0144514795974385 | 0.199360903071551 |
| TCX | ADediting_1203754 | chr5_44816252_+ | 6.3286003856879e-05 | 0.320632229726329 | 0.0618515548771349 | 0.152850648745448 | 0.0126960928999111 | 0.203059917157081 |
| CER | ADediting_1203757 | chr5_44816281_+ | 0.000112864360982028 | 0.310048570727512 | 0.000239218011882721 | 0.295681310680748 | 0.48976265723467 | 0.056824075001442 |
| CER | ADediting_1203758 | chr5_44816290_+ | 5.3802807046651e-09 | 0.453992438708232 | 1.0593740145425e-09 | 0.472190244985538 | 0.326878619695492 | 0.0805948967673082 |
| CER | ADediting_1203760 | chr5_44816304_+ | 0.000131937584099727 | 0.307122587396851 | 3.55455191124255e-05 | 0.330807430884598 | 0.582202673230408 | 0.0452769200191422 |
| IFG | ADediting_1203760 | chr5_44816304_+ | 0.0618510497965813 | 0.378809489133023 | 0.00878135791158078 | 0.512673590435288 | 0.515197862186354 | 0.136531344773757 |
| CER | ADediting_1203761 | chr5_44816321_+ | 0.00407433652911095 | 0.233233969070063 | 4.27729017669294e-05 | 0.327581750802562 | 0.103547891619191 | 0.133437953609536 |
| CER | ADediting_1203771 | chr5_44816416_+ | 9.6590908267616e-05 | 0.312936256486478 | 4.68315177286027e-05 | 0.325988601770678 | 0.59814319819529 | 0.0433779056816445 |
| CER | ADediting_1203772 | chr5_44816441_+ | 0.000177104772908902 | 0.3015207239462 | 3.250188425654e-07 | 0.402667545697093 | 0.00716345688296448 | 0.218732485188924 |
| CER | ADediting_1203776 | chr5_44816469_+ | 6.92216501640421e-05 | 0.319017830101614 | 0.00741624781271575 | 0.217811997134847 | 0.0251536807363567 | 0.182802314595663 |
| CER | ADediting_1203777 | chr5_44816481_+ | 4.53926017635565e-07 | 0.398084410916985 | 2.35560762162404e-05 | 0.337851092751669 | 0.00491196198353593 | 0.228524778399533 |
| IFG | ADediting_1203777 | chr5_44816481_+ | 0.717066832599078 | -0.0762756395467249 | 0.666634910081897 | 0.0906157562643307 | 0.022243815782365 | 0.455151098111274 |
| Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 4.44541822680015e-70 | 0.799246547922073 | 4.19682033571263e-43 | 0.678173825323249 | 0.736843844786894 | 0.0191612070752401 |
| AC | 2.28652357797971e-70 | 0.848109512438186 | 5.94345318922987e-70 | 0.84683073462712 | 0.115461096853152 | 0.0998071608007946 |
| PCC | 4.72709078584552e-44 | 0.801387159848616 | 1.37088796355796e-56 | 0.858029545987908 | 0.468765406280794 | 0.052731865199782 |
| CER | 6.73522826390577e-50 | 0.880751808529987 | 2.20002669295519e-26 | 0.731422265767441 | 0.0360848284113332 | 0.171301191593687 |
| TCX | 2.29651877803196e-46 | 0.865864312050387 | 2.1258788145943e-26 | 0.731568656352526 | 0.579489973795638 | -0.0456024511298398 |
| FP | 2.87687085086237e-17 | 0.578207085706202 | 6.96359365663077e-31 | 0.729819700181948 | 0.660625117555252 | -0.0331325985910103 |
| IFG | 1.91547678066105e-07 | 0.836350831900564 | 6.63693920585468e-05 | 0.711639681786399 | 0.990781244246143 | 0.00243554665963808 |
| PG | 8.51182942304865e-58 | 0.86785481313306 | 5.01298829042266e-39 | 0.778218473625017 | 0.224570825836151 | -0.0894732251448549 |
| STG | 6.4304817167143e-17 | 0.758534472201117 | 1.21330961355712e-21 | 0.820807109581908 | 0.262116183670344 | -0.123738309268964 |
Top |
Relation with AD stages for MRPS30 |
| Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| CER | ADediting_1203718 | chr5_44815573_+ | 1.90850280391525e-05 | 0.398830698502996 |
| CER | ADediting_1203720 | chr5_44815588_+ | 0.001302446090731 | 0.305527643967331 |
| CER | ADediting_1203730 | chr5_44815651_+ | 0.000604031322638309 | 0.324815830539614 |
| CER | ADediting_1203733 | chr5_44815666_+ | 1.9641167507108e-05 | 0.398283526866437 |
| CER | ADediting_1203735 | chr5_44815669_+ | 0.000353768526883424 | 0.337533289746701 |
| CER | ADediting_1203739 | chr5_44815675_+ | 0.000110725003861217 | 0.363413828245581 |
| CER | ADediting_1203754 | chr5_44816252_+ | 0.00130146443390651 | 0.305547214653783 |
| TCX | ADediting_1203716 | chr5_44815566_+ | 4.53310896895115e-05 | 0.385298332802612 |
| TCX | ADediting_1203717 | chr5_44815567_+ | 5.5171980223294e-05 | 0.381294454900631 |
| TCX | ADediting_1203735 | chr5_44815669_+ | 5.63586670738968e-05 | 0.380857619815848 |
| TCX | ADediting_1203739 | chr5_44815675_+ | 1.93624780713935e-06 | 0.443383817987602 |
| TCX | ADediting_1203754 | chr5_44816252_+ | 1.55013382610197e-05 | 0.406299147614194 |
| TCX | ADediting_1203760 | chr5_44816304_+ | 0.000274208757359489 | 0.346499020497558 |
| Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
| CER | 0.000880241512330573 | 0.315522668945613 |
Top |
RelatedDrugs for MRPS30 |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Top |
RelatedDiseases for MRPS30 |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
|