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| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for PHTF1 |
 Gene summary |
| Gene information | Gene symbol | PHTF1 | Gene ID | 10745 |
| Gene name | putative homeodomain transcription factor 1 | |
| Synonyms | PHTF | |
| Cytomap | 1p13.2 | |
| Type of gene | protein-coding | |
| Description | putative homeodomain transcription factor 1 | |
| Modification date | 20200313 | |
| UniProtAcc | Q9UMS5, | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
Top |
RNA A-to-I events for PHTF1 |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA editing frequencies across three data sets. |
 |
| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA A-to-I editing events in AD. |
| ADediting_9617(113702495, -), ADediting_9618(113702509, -), ADediting_9619(113702548, -), ADediting_9620(113702560, -), ADediting_9621(113702583, -), ADediting_9622(113702584, -), ADediting_9623(113702586, -), ADediting_9624(113703580, -), ADediting_9625(113703593, -), ADediting_9626(113703633, -), ADediting_9627(113703634, -), ADediting_9628(113706980, -), ADediting_9629(113715389, -), ADediting_9630(113715390, -), ADediting_9631(113715396, -), ADediting_9632(113715398, -), ADediting_9633(113715445, -), ADediting_9634(113715465, -), ADediting_9635(113715474, -), ADediting_9636(113715484, -), ADediting_9637(113715489, -), ADediting_9638(113715490, -), ADediting_9639(113715491, -), ADediting_9640(113715500, -), ADediting_9641(113715520, -), ADediting_9642(113715536, -), ADediting_9643(113715548, -), ADediting_9644(113715565, -), ADediting_9645(113715566, -), ADediting_9646(113715572, -), ADediting_9647(113715585, -), ADediting_9648(113715591, -), ADediting_9649(113715601, -), ADediting_9650(113715615, -), ADediting_9651(113716397, -), ADediting_9652(113716410, -), ADediting_9653(113716411, -), ADediting_9654(113716421, -), ADediting_9655(113716424, -), ADediting_9656(113716437, -), ADediting_9657(113716442, -), ADediting_9658(113716452, -), ADediting_9659(113716453, -), ADediting_9660(113716455, -), ADediting_9661(113716456, -), ADediting_9662(113716460, -), ADediting_9663(113716477, -), ADediting_9664(113716503, -), ADediting_9665(113716509, -), ADediting_9666(113716513, -), ADediting_9667(113716526, -), ADediting_9668(113716527, -), ADediting_9669(113716528, -), ADediting_9670(113716531, -), ADediting_9671(113716548, -), ADediting_9672(113716553, -), ADediting_9673(113716554, -), ADediting_9674(113716562, -), ADediting_9675(113716568, -), ADediting_9676(113716569, -), ADediting_9677(113716577, -), ADediting_9678(113716582, -), ADediting_9679(113716614, -), ADediting_9680(113716622, -), ADediting_9681(113716623, -), ADediting_9682(113716625, -), ADediting_9683(113716631, -), ADediting_9684(113719112, -), ADediting_9685(113719139, -), ADediting_9686(113719157, -), ADediting_9687(113719161, -), ADediting_9688(113719165, -), ADediting_9689(113719313, -), ADediting_9690(113720887, -), ADediting_9691(113720978, -), ADediting_9692(113721006, -), ADediting_9693(113721042, -), ADediting_9694(113721048, -), ADediting_9695(113721061, -), ADediting_9696(113721091, -), ADediting_9697(113721719, -), ADediting_9698(113721720, -), ADediting_9699(113721725, -), ADediting_9700(113721737, -), ADediting_9701(113721742, -), ADediting_9702(113721750, -), ADediting_9703(113721752, -), ADediting_9704(113721757, -), ADediting_9705(113721758, -), ADediting_9706(113721762, -), ADediting_9707(113721766, -), ADediting_9708(113721787, -), ADediting_9709(113721818, -), ADediting_9710(113721828, -), ADediting_9711(113721834, -), ADediting_9712(113721854, -), ADediting_9713(113721889, -), ADediting_9714(113721890, -), ADediting_9715(113721891, -), ADediting_9716(113721899, -), ADediting_9717(113721944, -), ADediting_9718(113721945, -), ADediting_9719(113721966, -), ADediting_9720(113721967, -), ADediting_9721(113721983, -), ADediting_9722(113722195, -), ADediting_9723(113722207, -), ADediting_9724(113722208, -), ADediting_9725(113722230, -), ADediting_9726(113722275, -), ADediting_9727(113722290, -), ADediting_9728(113722311, -), ADediting_9729(113722317, -), ADediting_9730(113722327, -), ADediting_9731(113722370, -), ADediting_9732(113722376, -), ADediting_9733(113722382, -), ADediting_9734(113722395, -), ADediting_9735(113722408, -), ADediting_9736(113722412, -), ADediting_9737(113722413, -), ADediting_9738(113722420, -), ADediting_9739(113722640, -), ADediting_9740(113722656, -), ADediting_9741(113722668, -), ADediting_9742(113722669, -), ADediting_9743(113722710, -), ADediting_9744(113722801, -), ADediting_9745(113722837, -), ADediting_9746(113722844, -), ADediting_9747(113722857, -), ADediting_9748(113722863, -), ADediting_9749(113722918, -), ADediting_9750(113723213, -), ADediting_9751(113723220, -), ADediting_9752(113723238, -), ADediting_9753(113723246, -), ADediting_9754(113723250, -), ADediting_9755(113723254, -), ADediting_9756(113723263, -), ADediting_9757(113723274, -), ADediting_9758(113723275, -), ADediting_9759(113723283, -), ADediting_9760(113723289, -), ADediting_9761(113723292, -), ADediting_9762(113723310, -), ADediting_9763(113723315, -), ADediting_9764(113723316, -), ADediting_9765(113723322, -), ADediting_9766(113723342, -), ADediting_9767(113723348, -), ADediting_9768(113723351, -), ADediting_9769(113723353, -), ADediting_9770(113723354, -), ADediting_9771(113723356, -), ADediting_9772(113723357, -), ADediting_9773(113723371, -), ADediting_9774(113723381, -), ADediting_9775(113723382, -), ADediting_9776(113723391, -), ADediting_9777(113723396, -), ADediting_9778(113723397, -), ADediting_9779(113723405, -), ADediting_9780(113723434, -), ADediting_9781(113723445, -), ADediting_9782(113723450, -), ADediting_9783(113723451, -), ADediting_9784(113723467, -), ADediting_9785(113723469, -), ADediting_9786(113724348, -), ADediting_9787(113724368, -), ADediting_9788(113724374, -), ADediting_9789(113724391, -), ADediting_9790(113724395, -), ADediting_9791(113724399, -), ADediting_9792(113724415, -), ADediting_9793(113724417, -), ADediting_9794(113724427, -), ADediting_9795(113724458, -), ADediting_9796(113724459, -), ADediting_9797(113724464, -), ADediting_9798(113724478, -), ADediting_9799(113724484, -), ADediting_9800(113724497, -), ADediting_9801(113724502, -), ADediting_9802(113724527, -), ADediting_9803(113732928, -), ADediting_9804(113732975, -), ADediting_9805(113732989, -), ADediting_9806(113732994, -), ADediting_9807(113732999, -), ADediting_9808(113733021, -), ADediting_9809(113733035, -), ADediting_9810(113733054, -), ADediting_9811(113733058, -), ADediting_9812(113733104, -), ADediting_9813(113733118, -), ADediting_9814(113733157, -), ADediting_9815(113733168, -), ADediting_9816(113733175, -), ADediting_9817(113733182, -), ADediting_9818(113734088, -), ADediting_9819(113738899, -), ADediting_9820(113738973, -), ADediting_9821(113738976, -), ADediting_9822(113738980, -), ADediting_9823(113739041, -), ADediting_9824(113739080, -), ADediting_9825(113739085, -), ADediting_9826(113739095, -), ADediting_9827(113739125, -), ADediting_9828(113740813, -), ADediting_9829(113740826, -), ADediting_9830(113740827, -), ADediting_9831(113740828, -), ADediting_9832(113740839, -), ADediting_9833(113740979, -), ADediting_9834(113742367, -), ADediting_9835(113742379, -), ADediting_9836(113742421, -), ADediting_9837(113742524, -), ADediting_9838(113742558, -), ADediting_9839(113742582, -), ADediting_9840(113742608, -), ADediting_9841(113744715, -), ADediting_9842(113744733, -), ADediting_9843(113744760, -), ADediting_9844(113744773, -), ADediting_9845(113744800, -), ADediting_9846(113744837, -), ADediting_9847(113744849, -), ADediting_9848(113744866, -), ADediting_9849(113744918, -), ADediting_9850(113744941, -), ADediting_9851(113748012, -), ADediting_9852(113748075, -), ADediting_9853(113748116, -), ADediting_9854(113748167, -), ADediting_9855(113748224, -), ADediting_9856(113748251, -), ADediting_9857(113748623, -), ADediting_9858(113748632, -), ADediting_9859(113748672, -), ADediting_9860(113748698, -), ADediting_9861(113748709, -), ADediting_9862(113748711, -), ADediting_9863(113748755, -), ADediting_9864(113750773, -), ADediting_9865(113750838, -), ADediting_9866(113752467, -), ADediting_9867(113752468, -), ADediting_9868(113752497, -), ADediting_9869(113752634, -), ADediting_9870(113752656, -), ADediting_9871(113752657, -), ADediting_9872(113753525, -), ADediting_9873(113753539, -), ADediting_9874(113753552, -), ADediting_9875(113753556, -), ADediting_9876(113753566, -), ADediting_9877(113753621, -), ADediting_9878(113753647, -), ADediting_9879(113753773, -), ADediting_9880(113753870, -), ADediting_9881(113753874, -), ADediting_9882(113753920, -), ADediting_9883(113753938, -), ADediting_9884(113753943, -), ADediting_9885(113754194, -), ADediting_9886(113754219, -), ADediting_9887(113754239, -), ADediting_9888(113754245, -), ADediting_9889(113754256, -), ADediting_9890(113754311, -), ADediting_9891(113754316, -), ADediting_9892(113754328, -), ADediting_9893(113754343, -), ADediting_9894(113754359, -), ADediting_9895(113754363, -), ADediting_9896(113754384, -), ADediting_9897(113755791, -), ADediting_9898(113755826, -), ADediting_9899(113755943, -), ADediting_9900(113755945, -), ADediting_9901(113755955, -), ADediting_9902(113755967, -), ADediting_9903(113755983, -), ADediting_9904(113756045, -), ADediting_9905(113757104, -), ADediting_1514045(113702534, -), ADediting_1514046(113715411, -), ADediting_1514047(113715540, -), ADediting_1514048(113715616, -), ADediting_1514049(113716392, -), ADediting_1514050(113719063, -), ADediting_1514051(113719106, -), ADediting_1514052(113719164, -), ADediting_1514053(113722357, -), ADediting_1514054(113724360, -), ADediting_1514055(113724370, -), ADediting_1514056(113724538, -), ADediting_1514057(113742872, -), ADediting_1514058(113742926, -), ADediting_1514059(113743009, -), ADediting_1514060(113743027, -), ADediting_1514061(113743046, -), ADediting_1514062(113743060, -), ADediting_1514063(113744799, -), ADediting_1514064(113744943, -), ADediting_1514065(113748106, -), ADediting_1514066(113748132, -), ADediting_1514067(113748754, -), ADediting_1514068(113748823, -), |
Top |
RNA editing positional annotations for PHTF1 using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_9617 | chr1_113702495_- | intronic |
| ADediting_9618 | chr1_113702509_- | intronic |
| ADediting_9619 | chr1_113702548_- | intronic |
| ADediting_9620 | chr1_113702560_- | intronic |
| ADediting_9621 | chr1_113702583_- | intronic |
| ADediting_9622 | chr1_113702584_- | intronic |
| ADediting_9623 | chr1_113702586_- | intronic |
| ADediting_9624 | chr1_113703580_- | intronic |
| ADediting_9625 | chr1_113703593_- | intronic |
| ADediting_9626 | chr1_113703633_- | intronic |
| ADediting_9627 | chr1_113703634_- | intronic |
| ADediting_9628 | chr1_113706980_- | intronic |
| ADediting_9629 | chr1_113715389_- | intronic |
| ADediting_9630 | chr1_113715390_- | intronic |
| ADediting_9631 | chr1_113715396_- | intronic |
| ADediting_9632 | chr1_113715398_- | intronic |
| ADediting_9633 | chr1_113715445_- | intronic |
| ADediting_9634 | chr1_113715465_- | intronic |
| ADediting_9635 | chr1_113715474_- | intronic |
| ADediting_9636 | chr1_113715484_- | intronic |
| ADediting_9637 | chr1_113715489_- | intronic |
| ADediting_9638 | chr1_113715490_- | intronic |
| ADediting_9639 | chr1_113715491_- | intronic |
| ADediting_9640 | chr1_113715500_- | intronic |
| ADediting_9641 | chr1_113715520_- | intronic |
| ADediting_9642 | chr1_113715536_- | intronic |
| ADediting_9643 | chr1_113715548_- | intronic |
| ADediting_9644 | chr1_113715565_- | intronic |
| ADediting_9645 | chr1_113715566_- | intronic |
| ADediting_9646 | chr1_113715572_- | intronic |
| ADediting_9647 | chr1_113715585_- | intronic |
| ADediting_9648 | chr1_113715591_- | intronic |
| ADediting_9649 | chr1_113715601_- | intronic |
| ADediting_9650 | chr1_113715615_- | intronic |
| ADediting_9651 | chr1_113716397_- | intronic |
| ADediting_9652 | chr1_113716410_- | intronic |
| ADediting_9653 | chr1_113716411_- | intronic |
| ADediting_9654 | chr1_113716421_- | intronic |
| ADediting_9655 | chr1_113716424_- | intronic |
| ADediting_9656 | chr1_113716437_- | intronic |
| ADediting_9657 | chr1_113716442_- | intronic |
| ADediting_9658 | chr1_113716452_- | intronic |
| ADediting_9659 | chr1_113716453_- | intronic |
| ADediting_9660 | chr1_113716455_- | intronic |
| ADediting_9661 | chr1_113716456_- | intronic |
| ADediting_9662 | chr1_113716460_- | intronic |
| ADediting_9663 | chr1_113716477_- | intronic |
| ADediting_9664 | chr1_113716503_- | intronic |
| ADediting_9665 | chr1_113716509_- | intronic |
| ADediting_9666 | chr1_113716513_- | intronic |
| ADediting_9667 | chr1_113716526_- | intronic |
| ADediting_9668 | chr1_113716527_- | intronic |
| ADediting_9669 | chr1_113716528_- | intronic |
| ADediting_9670 | chr1_113716531_- | intronic |
| ADediting_9671 | chr1_113716548_- | intronic |
| ADediting_9672 | chr1_113716553_- | intronic |
| ADediting_9673 | chr1_113716554_- | intronic |
| ADediting_9674 | chr1_113716562_- | intronic |
| ADediting_9675 | chr1_113716568_- | intronic |
| ADediting_9676 | chr1_113716569_- | intronic |
| ADediting_9677 | chr1_113716577_- | intronic |
| ADediting_9678 | chr1_113716582_- | intronic |
| ADediting_9679 | chr1_113716614_- | intronic |
| ADediting_9680 | chr1_113716622_- | intronic |
| ADediting_9681 | chr1_113716623_- | intronic |
| ADediting_9682 | chr1_113716625_- | intronic |
| ADediting_9683 | chr1_113716631_- | intronic |
| ADediting_9684 | chr1_113719112_- | intronic |
| ADediting_9685 | chr1_113719139_- | intronic |
| ADediting_9686 | chr1_113719157_- | intronic |
| ADediting_9687 | chr1_113719161_- | intronic |
| ADediting_9688 | chr1_113719165_- | intronic |
| ADediting_9689 | chr1_113719313_- | intronic |
| ADediting_9690 | chr1_113720887_- | intronic |
| ADediting_9691 | chr1_113720978_- | intronic |
| ADediting_9692 | chr1_113721006_- | intronic |
| ADediting_9693 | chr1_113721042_- | intronic |
| ADediting_9694 | chr1_113721048_- | intronic |
| ADediting_9695 | chr1_113721061_- | intronic |
| ADediting_9696 | chr1_113721091_- | intronic |
| ADediting_9697 | chr1_113721719_- | intronic |
| ADediting_9698 | chr1_113721720_- | intronic |
| ADediting_9699 | chr1_113721725_- | intronic |
| ADediting_9700 | chr1_113721737_- | intronic |
| ADediting_9701 | chr1_113721742_- | intronic |
| ADediting_9702 | chr1_113721750_- | intronic |
| ADediting_9703 | chr1_113721752_- | intronic |
| ADediting_9704 | chr1_113721757_- | intronic |
| ADediting_9705 | chr1_113721758_- | intronic |
| ADediting_9706 | chr1_113721762_- | intronic |
| ADediting_9707 | chr1_113721766_- | intronic |
| ADediting_9708 | chr1_113721787_- | intronic |
| ADediting_9709 | chr1_113721818_- | intronic |
| ADediting_9710 | chr1_113721828_- | intronic |
| ADediting_9711 | chr1_113721834_- | intronic |
| ADediting_9712 | chr1_113721854_- | intronic |
| ADediting_9713 | chr1_113721889_- | intronic |
| ADediting_9714 | chr1_113721890_- | intronic |
| ADediting_9715 | chr1_113721891_- | intronic |
| ADediting_9716 | chr1_113721899_- | intronic |
| ADediting_9717 | chr1_113721944_- | intronic |
| ADediting_9718 | chr1_113721945_- | intronic |
| ADediting_9719 | chr1_113721966_- | intronic |
| ADediting_9720 | chr1_113721967_- | intronic |
| ADediting_9721 | chr1_113721983_- | intronic |
| ADediting_9722 | chr1_113722195_- | intronic |
| ADediting_9723 | chr1_113722207_- | intronic |
| ADediting_9724 | chr1_113722208_- | intronic |
| ADediting_9725 | chr1_113722230_- | intronic |
| ADediting_9726 | chr1_113722275_- | intronic |
| ADediting_9727 | chr1_113722290_- | intronic |
| ADediting_9728 | chr1_113722311_- | intronic |
| ADediting_9729 | chr1_113722317_- | intronic |
| ADediting_9730 | chr1_113722327_- | intronic |
| ADediting_9731 | chr1_113722370_- | intronic |
| ADediting_9732 | chr1_113722376_- | intronic |
| ADediting_9733 | chr1_113722382_- | intronic |
| ADediting_9734 | chr1_113722395_- | intronic |
| ADediting_9735 | chr1_113722408_- | intronic |
| ADediting_9736 | chr1_113722412_- | intronic |
| ADediting_9737 | chr1_113722413_- | intronic |
| ADediting_9738 | chr1_113722420_- | intronic |
| ADediting_9739 | chr1_113722640_- | intronic |
| ADediting_9740 | chr1_113722656_- | intronic |
| ADediting_9741 | chr1_113722668_- | intronic |
| ADediting_9742 | chr1_113722669_- | intronic |
| ADediting_9743 | chr1_113722710_- | intronic |
| ADediting_9744 | chr1_113722801_- | intronic |
| ADediting_9745 | chr1_113722837_- | intronic |
| ADediting_9746 | chr1_113722844_- | intronic |
| ADediting_9747 | chr1_113722857_- | intronic |
| ADediting_9748 | chr1_113722863_- | intronic |
| ADediting_9749 | chr1_113722918_- | intronic |
| ADediting_9750 | chr1_113723213_- | intronic |
| ADediting_9751 | chr1_113723220_- | intronic |
| ADediting_9752 | chr1_113723238_- | intronic |
| ADediting_9753 | chr1_113723246_- | intronic |
| ADediting_9754 | chr1_113723250_- | intronic |
| ADediting_9755 | chr1_113723254_- | intronic |
| ADediting_9756 | chr1_113723263_- | intronic |
| ADediting_9757 | chr1_113723274_- | intronic |
| ADediting_9758 | chr1_113723275_- | intronic |
| ADediting_9759 | chr1_113723283_- | intronic |
| ADediting_9760 | chr1_113723289_- | intronic |
| ADediting_9761 | chr1_113723292_- | intronic |
| ADediting_9762 | chr1_113723310_- | intronic |
| ADediting_9763 | chr1_113723315_- | intronic |
| ADediting_9764 | chr1_113723316_- | intronic |
| ADediting_9765 | chr1_113723322_- | intronic |
| ADediting_9766 | chr1_113723342_- | intronic |
| ADediting_9767 | chr1_113723348_- | intronic |
| ADediting_9768 | chr1_113723351_- | intronic |
| ADediting_9769 | chr1_113723353_- | intronic |
| ADediting_9770 | chr1_113723354_- | intronic |
| ADediting_9771 | chr1_113723356_- | intronic |
| ADediting_9772 | chr1_113723357_- | intronic |
| ADediting_9773 | chr1_113723371_- | intronic |
| ADediting_9774 | chr1_113723381_- | intronic |
| ADediting_9775 | chr1_113723382_- | intronic |
| ADediting_9776 | chr1_113723391_- | intronic |
| ADediting_9777 | chr1_113723396_- | intronic |
| ADediting_9778 | chr1_113723397_- | intronic |
| ADediting_9779 | chr1_113723405_- | intronic |
| ADediting_9780 | chr1_113723434_- | intronic |
| ADediting_9781 | chr1_113723445_- | intronic |
| ADediting_9782 | chr1_113723450_- | intronic |
| ADediting_9783 | chr1_113723451_- | intronic |
| ADediting_9784 | chr1_113723467_- | intronic |
| ADediting_9785 | chr1_113723469_- | intronic |
| ADediting_9786 | chr1_113724348_- | intronic |
| ADediting_9787 | chr1_113724368_- | intronic |
| ADediting_9788 | chr1_113724374_- | intronic |
| ADediting_9789 | chr1_113724391_- | intronic |
| ADediting_9790 | chr1_113724395_- | intronic |
| ADediting_9791 | chr1_113724399_- | intronic |
| ADediting_9792 | chr1_113724415_- | intronic |
| ADediting_9793 | chr1_113724417_- | intronic |
| ADediting_9794 | chr1_113724427_- | intronic |
| ADediting_9795 | chr1_113724458_- | intronic |
| ADediting_9796 | chr1_113724459_- | intronic |
| ADediting_9797 | chr1_113724464_- | intronic |
| ADediting_9798 | chr1_113724478_- | intronic |
| ADediting_9799 | chr1_113724484_- | intronic |
| ADediting_9800 | chr1_113724497_- | intronic |
| ADediting_9801 | chr1_113724502_- | intronic |
| ADediting_9802 | chr1_113724527_- | intronic |
| ADediting_9803 | chr1_113732928_- | intronic |
| ADediting_9804 | chr1_113732975_- | intronic |
| ADediting_9805 | chr1_113732989_- | intronic |
| ADediting_9806 | chr1_113732994_- | intronic |
| ADediting_9807 | chr1_113732999_- | intronic |
| ADediting_9808 | chr1_113733021_- | intronic |
| ADediting_9809 | chr1_113733035_- | intronic |
| ADediting_9810 | chr1_113733054_- | intronic |
| ADediting_9811 | chr1_113733058_- | intronic |
| ADediting_9812 | chr1_113733104_- | intronic |
| ADediting_9813 | chr1_113733118_- | intronic |
| ADediting_9814 | chr1_113733157_- | intronic |
| ADediting_9815 | chr1_113733168_- | intronic |
| ADediting_9816 | chr1_113733175_- | intronic |
| ADediting_9817 | chr1_113733182_- | intronic |
| ADediting_9818 | chr1_113734088_- | intronic |
| ADediting_9819 | chr1_113738899_- | intronic |
| ADediting_9820 | chr1_113738973_- | intronic |
| ADediting_9821 | chr1_113738976_- | intronic |
| ADediting_9822 | chr1_113738980_- | intronic |
| ADediting_9823 | chr1_113739041_- | intronic |
| ADediting_9824 | chr1_113739080_- | intronic |
| ADediting_9825 | chr1_113739085_- | intronic |
| ADediting_9826 | chr1_113739095_- | intronic |
| ADediting_9827 | chr1_113739125_- | intronic |
| ADediting_9828 | chr1_113740813_- | intronic |
| ADediting_9829 | chr1_113740826_- | intronic |
| ADediting_9830 | chr1_113740827_- | intronic |
| ADediting_9831 | chr1_113740828_- | intronic |
| ADediting_9832 | chr1_113740839_- | intronic |
| ADediting_9833 | chr1_113740979_- | intronic |
| ADediting_9834 | chr1_113742367_- | intronic |
| ADediting_9835 | chr1_113742379_- | intronic |
| ADediting_9836 | chr1_113742421_- | intronic |
| ADediting_9837 | chr1_113742524_- | intronic |
| ADediting_9838 | chr1_113742558_- | intronic |
| ADediting_9839 | chr1_113742582_- | intronic |
| ADediting_9840 | chr1_113742608_- | intronic |
| ADediting_9841 | chr1_113744715_- | intronic |
| ADediting_9842 | chr1_113744733_- | intronic |
| ADediting_9843 | chr1_113744760_- | intronic |
| ADediting_9844 | chr1_113744773_- | intronic |
| ADediting_9845 | chr1_113744800_- | intronic |
| ADediting_9846 | chr1_113744837_- | intronic |
| ADediting_9847 | chr1_113744849_- | intronic |
| ADediting_9848 | chr1_113744866_- | intronic |
| ADediting_9849 | chr1_113744918_- | intronic |
| ADediting_9850 | chr1_113744941_- | intronic |
| ADediting_9851 | chr1_113748012_- | intronic |
| ADediting_9852 | chr1_113748075_- | intronic |
| ADediting_9853 | chr1_113748116_- | intronic |
| ADediting_9854 | chr1_113748167_- | intronic |
| ADediting_9855 | chr1_113748224_- | intronic |
| ADediting_9856 | chr1_113748251_- | intronic |
| ADediting_9857 | chr1_113748623_- | intronic |
| ADediting_9858 | chr1_113748632_- | intronic |
| ADediting_9859 | chr1_113748672_- | intronic |
| ADediting_9860 | chr1_113748698_- | intronic |
| ADediting_9861 | chr1_113748709_- | intronic |
| ADediting_9862 | chr1_113748711_- | intronic |
| ADediting_9863 | chr1_113748755_- | intronic |
| ADediting_9864 | chr1_113750773_- | intronic |
| ADediting_9865 | chr1_113750838_- | intronic |
| ADediting_9866 | chr1_113752467_- | intronic |
| ADediting_9867 | chr1_113752468_- | intronic |
| ADediting_9868 | chr1_113752497_- | intronic |
| ADediting_9869 | chr1_113752634_- | intronic |
| ADediting_9870 | chr1_113752656_- | intronic |
| ADediting_9871 | chr1_113752657_- | intronic |
| ADediting_9872 | chr1_113753525_- | intronic |
| ADediting_9873 | chr1_113753539_- | intronic |
| ADediting_9874 | chr1_113753552_- | intronic |
| ADediting_9875 | chr1_113753556_- | intronic |
| ADediting_9876 | chr1_113753566_- | intronic |
| ADediting_9877 | chr1_113753621_- | intronic |
| ADediting_9878 | chr1_113753647_- | intronic |
| ADediting_9879 | chr1_113753773_- | intronic |
| ADediting_9880 | chr1_113753870_- | intronic |
| ADediting_9881 | chr1_113753874_- | intronic |
| ADediting_9882 | chr1_113753920_- | intronic |
| ADediting_9883 | chr1_113753938_- | intronic |
| ADediting_9884 | chr1_113753943_- | intronic |
| ADediting_9885 | chr1_113754194_- | intronic |
| ADediting_9886 | chr1_113754219_- | intronic |
| ADediting_9887 | chr1_113754239_- | intronic |
| ADediting_9888 | chr1_113754245_- | intronic |
| ADediting_9889 | chr1_113754256_- | intronic |
| ADediting_9890 | chr1_113754311_- | intronic |
| ADediting_9891 | chr1_113754316_- | intronic |
| ADediting_9892 | chr1_113754328_- | intronic |
| ADediting_9893 | chr1_113754343_- | intronic |
| ADediting_9894 | chr1_113754359_- | intronic |
| ADediting_9895 | chr1_113754363_- | intronic |
| ADediting_9896 | chr1_113754384_- | intronic |
| ADediting_9897 | chr1_113755791_- | intronic |
| ADediting_9898 | chr1_113755826_- | intronic |
| ADediting_9899 | chr1_113755943_- | intronic |
| ADediting_9900 | chr1_113755945_- | intronic |
| ADediting_9901 | chr1_113755955_- | intronic |
| ADediting_9902 | chr1_113755967_- | intronic |
| ADediting_9903 | chr1_113755983_- | intronic |
| ADediting_9904 | chr1_113756045_- | intronic |
| ADediting_9905 | chr1_113757104_- | intronic |
| ADediting_1514045 | chr1_113702534_- | intronic |
| ADediting_1514046 | chr1_113715411_- | intronic |
| ADediting_1514047 | chr1_113715540_- | intronic |
| ADediting_1514048 | chr1_113715616_- | intronic |
| ADediting_1514049 | chr1_113716392_- | intronic |
| ADediting_1514050 | chr1_113719063_- | intronic |
| ADediting_1514051 | chr1_113719106_- | intronic |
| ADediting_1514052 | chr1_113719164_- | intronic |
| ADediting_1514053 | chr1_113722357_- | intronic |
| ADediting_1514054 | chr1_113724360_- | intronic |
| ADediting_1514055 | chr1_113724370_- | intronic |
| ADediting_1514056 | chr1_113724538_- | intronic |
| ADediting_1514057 | chr1_113742872_- | intronic |
| ADediting_1514058 | chr1_113742926_- | intronic |
| ADediting_1514059 | chr1_113743009_- | intronic |
| ADediting_1514060 | chr1_113743027_- | intronic |
| ADediting_1514061 | chr1_113743046_- | intronic |
| ADediting_1514062 | chr1_113743060_- | intronic |
| ADediting_1514063 | chr1_113744799_- | intronic |
| ADediting_1514064 | chr1_113744943_- | intronic |
| ADediting_1514065 | chr1_113748106_- | intronic |
| ADediting_1514066 | chr1_113748132_- | intronic |
| ADediting_1514067 | chr1_113748754_- | intronic |
| ADediting_1514068 | chr1_113748823_- | intronic |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_9617 | chr1_113702495_- | SINE | Alu | Name=AluJr |
| ADediting_9618 | chr1_113702509_- | SINE | Alu | Name=AluJr |
| ADediting_9619 | chr1_113702548_- | SINE | Alu | Name=AluJr |
| ADediting_9620 | chr1_113702560_- | SINE | Alu | Name=AluJr |
| ADediting_9621 | chr1_113702583_- | SINE | Alu | Name=AluJr |
| ADediting_9622 | chr1_113702584_- | SINE | Alu | Name=AluJr |
| ADediting_9623 | chr1_113702586_- | SINE | Alu | Name=AluJr |
| ADediting_9624 | chr1_113703580_- | SINE | Alu | Name=FLAM_C |
| ADediting_9625 | chr1_113703593_- | SINE | Alu | Name=FLAM_C |
| ADediting_9626 | chr1_113703633_- | SINE | Alu | Name=FLAM_C |
| ADediting_9627 | chr1_113703634_- | SINE | Alu | Name=FLAM_C |
| ADediting_9628 | chr1_113706980_- | SINE | Alu | Name=FLAM_C |
| ADediting_9629 | chr1_113715389_- | SINE | Alu | Name=AluJb |
| ADediting_9630 | chr1_113715390_- | SINE | Alu | Name=AluJb |
| ADediting_9631 | chr1_113715396_- | SINE | Alu | Name=AluJb |
| ADediting_9632 | chr1_113715398_- | SINE | Alu | Name=AluJb |
| ADediting_9633 | chr1_113715445_- | SINE | Alu | Name=AluJb |
| ADediting_9634 | chr1_113715465_- | SINE | Alu | Name=AluJb |
| ADediting_9635 | chr1_113715474_- | SINE | Alu | Name=AluJb |
| ADediting_9636 | chr1_113715484_- | SINE | Alu | Name=AluJb |
| ADediting_9637 | chr1_113715489_- | SINE | Alu | Name=AluJb |
| ADediting_9638 | chr1_113715490_- | SINE | Alu | Name=AluJb |
| ADediting_9639 | chr1_113715491_- | SINE | Alu | Name=AluJb |
| ADediting_9640 | chr1_113715500_- | SINE | Alu | Name=AluJb |
| ADediting_9641 | chr1_113715520_- | SINE | Alu | Name=AluJb |
| ADediting_9642 | chr1_113715536_- | SINE | Alu | Name=AluJb |
| ADediting_9643 | chr1_113715548_- | SINE | Alu | Name=AluJb |
| ADediting_9644 | chr1_113715565_- | SINE | Alu | Name=AluJb |
| ADediting_9645 | chr1_113715566_- | SINE | Alu | Name=AluJb |
| ADediting_9646 | chr1_113715572_- | SINE | Alu | Name=AluJb |
| ADediting_9647 | chr1_113715585_- | SINE | Alu | Name=AluJb |
| ADediting_9648 | chr1_113715591_- | SINE | Alu | Name=AluJb |
| ADediting_9649 | chr1_113715601_- | SINE | Alu | Name=AluJb |
| ADediting_9650 | chr1_113715615_- | SINE | Alu | Name=AluJb |
| ADediting_9651 | chr1_113716397_- | SINE | Alu | Name=AluJr |
| ADediting_9652 | chr1_113716410_- | SINE | Alu | Name=AluJr |
| ADediting_9653 | chr1_113716411_- | SINE | Alu | Name=AluJr |
| ADediting_9654 | chr1_113716421_- | SINE | Alu | Name=AluJr |
| ADediting_9655 | chr1_113716424_- | SINE | Alu | Name=AluJr |
| ADediting_9656 | chr1_113716437_- | SINE | Alu | Name=AluJr |
| ADediting_9657 | chr1_113716442_- | SINE | Alu | Name=AluJr |
| ADediting_9658 | chr1_113716452_- | SINE | Alu | Name=AluJr |
| ADediting_9659 | chr1_113716453_- | SINE | Alu | Name=AluJr |
| ADediting_9660 | chr1_113716455_- | SINE | Alu | Name=AluJr |
| ADediting_9661 | chr1_113716456_- | SINE | Alu | Name=AluJr |
| ADediting_9662 | chr1_113716460_- | SINE | Alu | Name=AluJr |
| ADediting_9663 | chr1_113716477_- | SINE | Alu | Name=AluJr |
| ADediting_9664 | chr1_113716503_- | SINE | Alu | Name=AluJr |
| ADediting_9665 | chr1_113716509_- | SINE | Alu | Name=AluJr |
| ADediting_9666 | chr1_113716513_- | SINE | Alu | Name=AluJr |
| ADediting_9667 | chr1_113716526_- | SINE | Alu | Name=AluJr |
| ADediting_9668 | chr1_113716527_- | SINE | Alu | Name=AluJr |
| ADediting_9669 | chr1_113716528_- | SINE | Alu | Name=AluJr |
| ADediting_9670 | chr1_113716531_- | SINE | Alu | Name=AluJr |
| ADediting_9671 | chr1_113716548_- | SINE | Alu | Name=AluJr |
| ADediting_9672 | chr1_113716553_- | SINE | Alu | Name=AluJr |
| ADediting_9673 | chr1_113716554_- | SINE | Alu | Name=AluJr |
| ADediting_9674 | chr1_113716562_- | SINE | Alu | Name=AluJr |
| ADediting_9675 | chr1_113716568_- | SINE | Alu | Name=AluJr |
| ADediting_9676 | chr1_113716569_- | SINE | Alu | Name=AluJr |
| ADediting_9677 | chr1_113716577_- | SINE | Alu | Name=AluJr |
| ADediting_9678 | chr1_113716582_- | SINE | Alu | Name=AluJr |
| ADediting_9679 | chr1_113716614_- | SINE | Alu | Name=AluJr |
| ADediting_9680 | chr1_113716622_- | SINE | Alu | Name=AluJr |
| ADediting_9681 | chr1_113716623_- | SINE | Alu | Name=AluJr |
| ADediting_9682 | chr1_113716625_- | SINE | Alu | Name=AluJr |
| ADediting_9683 | chr1_113716631_- | SINE | Alu | Name=AluJr |
| ADediting_9684 | chr1_113719112_- | SINE | Alu | Name=AluSx1 |
| ADediting_9685 | chr1_113719139_- | SINE | Alu | Name=AluSx1 |
| ADediting_9686 | chr1_113719157_- | SINE | Alu | Name=AluSx1 |
| ADediting_9687 | chr1_113719161_- | SINE | Alu | Name=AluSx1 |
| ADediting_9688 | chr1_113719165_- | SINE | Alu | Name=AluSx1 |
| ADediting_9689 | chr1_113719313_- | LTR | ERVL-MaLR | Name=THE1A-int |
| ADediting_9690 | chr1_113720887_- | LTR | ERVL-MaLR | Name=THE1-int |
| ADediting_9691 | chr1_113720978_- | SINE | Alu | Name=AluSz6 |
| ADediting_9692 | chr1_113721006_- | SINE | Alu | Name=AluSz6 |
| ADediting_9693 | chr1_113721042_- | SINE | Alu | Name=AluSz6 |
| ADediting_9694 | chr1_113721048_- | SINE | Alu | Name=AluSz6 |
| ADediting_9695 | chr1_113721061_- | SINE | Alu | Name=AluSz6 |
| ADediting_9696 | chr1_113721091_- | SINE | Alu | Name=AluSz6 |
| ADediting_9697 | chr1_113721719_- | SINE | Alu | Name=AluY |
| ADediting_9698 | chr1_113721720_- | SINE | Alu | Name=AluY |
| ADediting_9699 | chr1_113721725_- | SINE | Alu | Name=AluY |
| ADediting_9700 | chr1_113721737_- | SINE | Alu | Name=AluY |
| ADediting_9701 | chr1_113721742_- | SINE | Alu | Name=AluY |
| ADediting_9702 | chr1_113721750_- | SINE | Alu | Name=AluY |
| ADediting_9703 | chr1_113721752_- | SINE | Alu | Name=AluY |
| ADediting_9704 | chr1_113721757_- | SINE | Alu | Name=AluY |
| ADediting_9705 | chr1_113721758_- | SINE | Alu | Name=AluY |
| ADediting_9706 | chr1_113721762_- | SINE | Alu | Name=AluY |
| ADediting_9707 | chr1_113721766_- | SINE | Alu | Name=AluY |
| ADediting_9708 | chr1_113721787_- | SINE | Alu | Name=AluY |
| ADediting_9709 | chr1_113721818_- | SINE | Alu | Name=AluY |
| ADediting_9710 | chr1_113721828_- | SINE | Alu | Name=AluY |
| ADediting_9711 | chr1_113721834_- | SINE | Alu | Name=AluY |
| ADediting_9712 | chr1_113721854_- | SINE | Alu | Name=AluY |
| ADediting_9713 | chr1_113721889_- | SINE | Alu | Name=AluY |
| ADediting_9714 | chr1_113721890_- | SINE | Alu | Name=AluY |
| ADediting_9715 | chr1_113721891_- | SINE | Alu | Name=AluY |
| ADediting_9716 | chr1_113721899_- | SINE | Alu | Name=AluY |
| ADediting_9717 | chr1_113721944_- | SINE | Alu | Name=AluY |
| ADediting_9718 | chr1_113721945_- | SINE | Alu | Name=AluY |
| ADediting_9719 | chr1_113721966_- | SINE | Alu | Name=AluY |
| ADediting_9720 | chr1_113721967_- | SINE | Alu | Name=AluY |
| ADediting_9721 | chr1_113721983_- | SINE | Alu | Name=AluY |
| ADediting_9722 | chr1_113722195_- | SINE | Alu | Name=AluYc |
| ADediting_9723 | chr1_113722207_- | SINE | Alu | Name=AluYc |
| ADediting_9724 | chr1_113722208_- | SINE | Alu | Name=AluYc |
| ADediting_9725 | chr1_113722230_- | SINE | Alu | Name=AluYc |
| ADediting_9726 | chr1_113722275_- | SINE | Alu | Name=AluYc |
| ADediting_9727 | chr1_113722290_- | SINE | Alu | Name=AluYc |
| ADediting_9728 | chr1_113722311_- | SINE | Alu | Name=AluYc |
| ADediting_9729 | chr1_113722317_- | SINE | Alu | Name=AluYc |
| ADediting_9730 | chr1_113722327_- | SINE | Alu | Name=AluYc |
| ADediting_9731 | chr1_113722370_- | SINE | Alu | Name=AluYc |
| ADediting_9732 | chr1_113722376_- | SINE | Alu | Name=AluYc |
| ADediting_9733 | chr1_113722382_- | SINE | Alu | Name=AluYc |
| ADediting_9734 | chr1_113722395_- | SINE | Alu | Name=AluYc |
| ADediting_9735 | chr1_113722408_- | SINE | Alu | Name=AluYc |
| ADediting_9736 | chr1_113722412_- | SINE | Alu | Name=AluYc |
| ADediting_9737 | chr1_113722413_- | SINE | Alu | Name=AluYc |
| ADediting_9738 | chr1_113722420_- | SINE | Alu | Name=AluYc |
| ADediting_9739 | chr1_113722640_- | SINE | Alu | Name=AluSx1 |
| ADediting_9740 | chr1_113722656_- | SINE | Alu | Name=AluSx1 |
| ADediting_9741 | chr1_113722668_- | SINE | Alu | Name=AluSx1 |
| ADediting_9742 | chr1_113722669_- | SINE | Alu | Name=AluSx1 |
| ADediting_9743 | chr1_113722710_- | SINE | Alu | Name=AluSx1 |
| ADediting_9744 | chr1_113722801_- | SINE | Alu | Name=AluSx1 |
| ADediting_9745 | chr1_113722837_- | SINE | Alu | Name=AluSx1 |
| ADediting_9746 | chr1_113722844_- | SINE | Alu | Name=AluSx1 |
| ADediting_9747 | chr1_113722857_- | SINE | Alu | Name=AluSx1 |
| ADediting_9748 | chr1_113722863_- | SINE | Alu | Name=AluSx1 |
| ADediting_9749 | chr1_113722918_- | SINE | Alu | Name=AluSx1 |
| ADediting_9750 | chr1_113723213_- | SINE | Alu | Name=AluSx1 |
| ADediting_9751 | chr1_113723220_- | SINE | Alu | Name=AluSx1 |
| ADediting_9752 | chr1_113723238_- | SINE | Alu | Name=AluSx1 |
| ADediting_9753 | chr1_113723246_- | SINE | Alu | Name=AluSx1 |
| ADediting_9754 | chr1_113723250_- | SINE | Alu | Name=AluSx1 |
| ADediting_9755 | chr1_113723254_- | SINE | Alu | Name=AluSx1 |
| ADediting_9756 | chr1_113723263_- | SINE | Alu | Name=AluSx1 |
| ADediting_9757 | chr1_113723274_- | SINE | Alu | Name=AluSx1 |
| ADediting_9758 | chr1_113723275_- | SINE | Alu | Name=AluSx1 |
| ADediting_9759 | chr1_113723283_- | SINE | Alu | Name=AluSx1 |
| ADediting_9760 | chr1_113723289_- | SINE | Alu | Name=AluSx1 |
| ADediting_9761 | chr1_113723292_- | SINE | Alu | Name=AluSx1 |
| ADediting_9762 | chr1_113723310_- | SINE | Alu | Name=AluSx1 |
| ADediting_9763 | chr1_113723315_- | SINE | Alu | Name=AluSx1 |
| ADediting_9764 | chr1_113723316_- | SINE | Alu | Name=AluSx1 |
| ADediting_9765 | chr1_113723322_- | SINE | Alu | Name=AluSx1 |
| ADediting_9766 | chr1_113723342_- | SINE | Alu | Name=AluSx1 |
| ADediting_9767 | chr1_113723348_- | SINE | Alu | Name=AluSx1 |
| ADediting_9768 | chr1_113723351_- | SINE | Alu | Name=AluSx1 |
| ADediting_9769 | chr1_113723353_- | SINE | Alu | Name=AluSx1 |
| ADediting_9770 | chr1_113723354_- | SINE | Alu | Name=AluSx1 |
| ADediting_9771 | chr1_113723356_- | SINE | Alu | Name=AluSx1 |
| ADediting_9772 | chr1_113723357_- | SINE | Alu | Name=AluSx1 |
| ADediting_9773 | chr1_113723371_- | SINE | Alu | Name=AluSx1 |
| ADediting_9774 | chr1_113723381_- | SINE | Alu | Name=AluSx1 |
| ADediting_9775 | chr1_113723382_- | SINE | Alu | Name=AluSx1 |
| ADediting_9776 | chr1_113723391_- | SINE | Alu | Name=AluSx1 |
| ADediting_9777 | chr1_113723396_- | SINE | Alu | Name=AluSx1 |
| ADediting_9778 | chr1_113723397_- | SINE | Alu | Name=AluSx1 |
| ADediting_9779 | chr1_113723405_- | SINE | Alu | Name=AluSx1 |
| ADediting_9780 | chr1_113723434_- | SINE | Alu | Name=AluSx1 |
| ADediting_9781 | chr1_113723445_- | SINE | Alu | Name=AluSx1 |
| ADediting_9782 | chr1_113723450_- | SINE | Alu | Name=AluSx1 |
| ADediting_9783 | chr1_113723451_- | SINE | Alu | Name=AluSx1 |
| ADediting_9784 | chr1_113723467_- | SINE | Alu | Name=AluSx1 |
| ADediting_9785 | chr1_113723469_- | SINE | Alu | Name=AluSx1 |
| ADediting_9786 | chr1_113724348_- | SINE | Alu | Name=AluSx1 |
| ADediting_9787 | chr1_113724368_- | SINE | Alu | Name=AluSx1 |
| ADediting_9788 | chr1_113724374_- | SINE | Alu | Name=AluSx1 |
| ADediting_9789 | chr1_113724391_- | SINE | Alu | Name=AluSx1 |
| ADediting_9790 | chr1_113724395_- | SINE | Alu | Name=AluSx1 |
| ADediting_9791 | chr1_113724399_- | SINE | Alu | Name=AluSx1 |
| ADediting_9792 | chr1_113724415_- | SINE | Alu | Name=AluSx1 |
| ADediting_9793 | chr1_113724417_- | SINE | Alu | Name=AluSx1 |
| ADediting_9794 | chr1_113724427_- | SINE | Alu | Name=AluSx1 |
| ADediting_9795 | chr1_113724458_- | SINE | Alu | Name=AluSx1 |
| ADediting_9796 | chr1_113724459_- | SINE | Alu | Name=AluSx1 |
| ADediting_9797 | chr1_113724464_- | SINE | Alu | Name=AluSx1 |
| ADediting_9798 | chr1_113724478_- | SINE | Alu | Name=AluSx1 |
| ADediting_9799 | chr1_113724484_- | SINE | Alu | Name=AluSx1 |
| ADediting_9800 | chr1_113724497_- | SINE | Alu | Name=AluSx1 |
| ADediting_9801 | chr1_113724502_- | SINE | Alu | Name=AluSx1 |
| ADediting_9802 | chr1_113724527_- | SINE | Alu | Name=AluSx1 |
| ADediting_9803 | chr1_113732928_- | SINE | Alu | Name=AluJr |
| ADediting_9804 | chr1_113732975_- | SINE | Alu | Name=AluJr |
| ADediting_9805 | chr1_113732989_- | SINE | Alu | Name=AluJr |
| ADediting_9806 | chr1_113732994_- | SINE | Alu | Name=AluJr |
| ADediting_9807 | chr1_113732999_- | SINE | Alu | Name=AluJr |
| ADediting_9808 | chr1_113733021_- | SINE | Alu | Name=AluJr |
| ADediting_9809 | chr1_113733035_- | SINE | Alu | Name=AluJr |
| ADediting_9810 | chr1_113733054_- | SINE | Alu | Name=AluJr |
| ADediting_9811 | chr1_113733058_- | SINE | Alu | Name=AluJr |
| ADediting_9812 | chr1_113733104_- | SINE | Alu | Name=AluJr |
| ADediting_9813 | chr1_113733118_- | SINE | Alu | Name=AluJr |
| ADediting_9814 | chr1_113733157_- | SINE | Alu | Name=AluJr |
| ADediting_9815 | chr1_113733168_- | SINE | Alu | Name=AluJr |
| ADediting_9816 | chr1_113733175_- | SINE | Alu | Name=AluJr |
| ADediting_9817 | chr1_113733182_- | SINE | Alu | Name=AluJr |
| ADediting_9818 | chr1_113734088_- | SINE | Alu | Name=AluSx1 |
| ADediting_9819 | chr1_113738899_- | SINE | Alu | Name=AluSq2 |
| ADediting_9820 | chr1_113738973_- | SINE | Alu | Name=AluSq2 |
| ADediting_9821 | chr1_113738976_- | SINE | Alu | Name=AluSq2 |
| ADediting_9822 | chr1_113738980_- | SINE | Alu | Name=AluSq2 |
| ADediting_9823 | chr1_113739041_- | SINE | Alu | Name=AluSq2 |
| ADediting_9824 | chr1_113739080_- | SINE | Alu | Name=AluSq2 |
| ADediting_9825 | chr1_113739085_- | SINE | Alu | Name=AluSq2 |
| ADediting_9826 | chr1_113739095_- | SINE | Alu | Name=AluSq2 |
| ADediting_9827 | chr1_113739125_- | SINE | Alu | Name=AluSq2 |
| ADediting_9828 | chr1_113740813_- | SINE | Alu | Name=AluSx1 |
| ADediting_9829 | chr1_113740826_- | SINE | Alu | Name=AluSx1 |
| ADediting_9830 | chr1_113740827_- | SINE | Alu | Name=AluSx1 |
| ADediting_9831 | chr1_113740828_- | SINE | Alu | Name=AluSx1 |
| ADediting_9832 | chr1_113740839_- | SINE | Alu | Name=AluSx1 |
| ADediting_9833 | chr1_113740979_- | SINE | Alu | Name=AluSx1 |
| ADediting_9834 | chr1_113742367_- | SINE | Alu | Name=AluSq2 |
| ADediting_9835 | chr1_113742379_- | SINE | Alu | Name=AluSq2 |
| ADediting_9836 | chr1_113742421_- | SINE | Alu | Name=AluSq2 |
| ADediting_9837 | chr1_113742524_- | SINE | Alu | Name=AluSq2 |
| ADediting_9838 | chr1_113742558_- | SINE | Alu | Name=AluSq2 |
| ADediting_9839 | chr1_113742582_- | SINE | Alu | Name=AluSq2 |
| ADediting_9840 | chr1_113742608_- | SINE | Alu | Name=AluSq2 |
| ADediting_9841 | chr1_113744715_- | SINE | Alu | Name=AluSx |
| ADediting_9842 | chr1_113744733_- | SINE | Alu | Name=AluSx |
| ADediting_9843 | chr1_113744760_- | SINE | Alu | Name=AluSx |
| ADediting_9844 | chr1_113744773_- | SINE | Alu | Name=AluSx |
| ADediting_9845 | chr1_113744800_- | SINE | Alu | Name=AluSx |
| ADediting_9846 | chr1_113744837_- | SINE | Alu | Name=AluSx |
| ADediting_9847 | chr1_113744849_- | SINE | Alu | Name=AluSx |
| ADediting_9848 | chr1_113744866_- | SINE | Alu | Name=AluSx |
| ADediting_9849 | chr1_113744918_- | SINE | Alu | Name=AluSx |
| ADediting_9850 | chr1_113744941_- | SINE | Alu | Name=AluSx |
| ADediting_9851 | chr1_113748012_- | SINE | Alu | Name=AluJb |
| ADediting_9852 | chr1_113748075_- | SINE | Alu | Name=AluJb |
| ADediting_9853 | chr1_113748116_- | SINE | Alu | Name=AluJb |
| ADediting_9854 | chr1_113748167_- | SINE | Alu | Name=AluJb |
| ADediting_9855 | chr1_113748224_- | SINE | Alu | Name=AluJb |
| ADediting_9856 | chr1_113748251_- | SINE | Alu | Name=AluJb |
| ADediting_9857 | chr1_113748623_- | SINE | Alu | Name=AluJb |
| ADediting_9858 | chr1_113748632_- | SINE | Alu | Name=AluJb |
| ADediting_9859 | chr1_113748672_- | SINE | Alu | Name=AluJb |
| ADediting_9860 | chr1_113748698_- | SINE | Alu | Name=AluJb |
| ADediting_9861 | chr1_113748709_- | SINE | Alu | Name=AluJb |
| ADediting_9862 | chr1_113748711_- | SINE | Alu | Name=AluJb |
| ADediting_9863 | chr1_113748755_- | SINE | Alu | Name=AluJb |
| ADediting_9864 | chr1_113750773_- | SINE | Alu | Name=AluSc |
| ADediting_9865 | chr1_113750838_- | SINE | Alu | Name=AluSc |
| ADediting_9866 | chr1_113752467_- | SINE | Alu | Name=AluY |
| ADediting_9867 | chr1_113752468_- | SINE | Alu | Name=AluY |
| ADediting_9868 | chr1_113752497_- | SINE | Alu | Name=AluY |
| ADediting_9869 | chr1_113752634_- | SINE | Alu | Name=AluY |
| ADediting_9870 | chr1_113752656_- | SINE | Alu | Name=AluY |
| ADediting_9871 | chr1_113752657_- | SINE | Alu | Name=AluY |
| ADediting_9872 | chr1_113753525_- | SINE | Alu | Name=AluSq2 |
| ADediting_9873 | chr1_113753539_- | SINE | Alu | Name=AluSq2 |
| ADediting_9874 | chr1_113753552_- | SINE | Alu | Name=AluSq2 |
| ADediting_9875 | chr1_113753556_- | SINE | Alu | Name=AluSq2 |
| ADediting_9876 | chr1_113753566_- | SINE | Alu | Name=AluSq2 |
| ADediting_9877 | chr1_113753621_- | SINE | Alu | Name=AluSq2 |
| ADediting_9878 | chr1_113753647_- | SINE | Alu | Name=AluSq2 |
| ADediting_9879 | chr1_113753773_- | SINE | Alu | Name=AluJr |
| ADediting_9880 | chr1_113753870_- | SINE | Alu | Name=AluJr |
| ADediting_9881 | chr1_113753874_- | SINE | Alu | Name=AluJr |
| ADediting_9882 | chr1_113753920_- | SINE | Alu | Name=AluJr |
| ADediting_9883 | chr1_113753938_- | SINE | Alu | Name=AluJr |
| ADediting_9884 | chr1_113753943_- | SINE | Alu | Name=AluJr |
| ADediting_9885 | chr1_113754194_- | SINE | Alu | Name=AluJr |
| ADediting_9886 | chr1_113754219_- | SINE | Alu | Name=AluJr |
| ADediting_9887 | chr1_113754239_- | SINE | Alu | Name=AluJr |
| ADediting_9888 | chr1_113754245_- | SINE | Alu | Name=AluJr |
| ADediting_9889 | chr1_113754256_- | SINE | Alu | Name=AluJr |
| ADediting_9890 | chr1_113754311_- | SINE | Alu | Name=AluJr |
| ADediting_9891 | chr1_113754316_- | SINE | Alu | Name=AluJr |
| ADediting_9892 | chr1_113754328_- | SINE | Alu | Name=AluJr |
| ADediting_9893 | chr1_113754343_- | SINE | Alu | Name=AluJr |
| ADediting_9894 | chr1_113754359_- | SINE | Alu | Name=AluJr |
| ADediting_9895 | chr1_113754363_- | SINE | Alu | Name=AluJr |
| ADediting_9896 | chr1_113754384_- | SINE | Alu | Name=AluJr |
| ADediting_9897 | chr1_113755791_- | SINE | Alu | Name=AluY |
| ADediting_9898 | chr1_113755826_- | SINE | Alu | Name=AluY |
| ADediting_9899 | chr1_113755943_- | SINE | Alu | Name=AluY |
| ADediting_9900 | chr1_113755945_- | SINE | Alu | Name=AluY |
| ADediting_9901 | chr1_113755955_- | SINE | Alu | Name=AluY |
| ADediting_9902 | chr1_113755967_- | SINE | Alu | Name=AluY |
| ADediting_9903 | chr1_113755983_- | SINE | Alu | Name=AluY |
| ADediting_9904 | chr1_113756045_- | SINE | Alu | Name=AluY |
| ADediting_9905 | chr1_113757104_- | SINE | Alu | Name=AluY |
| ADediting_1514045 | chr1_113702534_- | SINE | Alu | Name=AluJr |
| ADediting_1514046 | chr1_113715411_- | SINE | Alu | Name=AluJb |
| ADediting_1514047 | chr1_113715540_- | SINE | Alu | Name=AluJb |
| ADediting_1514048 | chr1_113715616_- | SINE | Alu | Name=AluJb |
| ADediting_1514049 | chr1_113716392_- | SINE | Alu | Name=AluJr |
| ADediting_1514050 | chr1_113719063_- | SINE | Alu | Name=AluSx1 |
| ADediting_1514051 | chr1_113719106_- | SINE | Alu | Name=AluSx1 |
| ADediting_1514052 | chr1_113719164_- | SINE | Alu | Name=AluSx1 |
| ADediting_1514053 | chr1_113722357_- | SINE | Alu | Name=AluYc |
| ADediting_1514054 | chr1_113724360_- | SINE | Alu | Name=AluSx1 |
| ADediting_1514055 | chr1_113724370_- | SINE | Alu | Name=AluSx1 |
| ADediting_1514056 | chr1_113724538_- | SINE | Alu | Name=AluSx1 |
| ADediting_1514057 | chr1_113742872_- | SINE | Alu | Name=AluJo |
| ADediting_1514058 | chr1_113742926_- | SINE | Alu | Name=AluJo |
| ADediting_1514059 | chr1_113743009_- | SINE | Alu | Name=AluJo |
| ADediting_1514060 | chr1_113743027_- | SINE | Alu | Name=AluJo |
| ADediting_1514061 | chr1_113743046_- | SINE | Alu | Name=AluJo |
| ADediting_1514062 | chr1_113743060_- | SINE | Alu | Name=AluJo |
| ADediting_1514063 | chr1_113744799_- | SINE | Alu | Name=AluSx |
| ADediting_1514064 | chr1_113744943_- | SINE | Alu | Name=AluSx |
| ADediting_1514065 | chr1_113748106_- | SINE | Alu | Name=AluJb |
| ADediting_1514066 | chr1_113748132_- | SINE | Alu | Name=AluJb |
| ADediting_1514067 | chr1_113748754_- | SINE | Alu | Name=AluJb |
| ADediting_1514068 | chr1_113748823_- | SINE | Alu | Name=AluJb |
Top |
RNA A-to-I editing events in the alternative splicing sites for PHTF1 |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
Top |
Differntial gene expression between RNA A-to-I edited versus non-edited samples for PHTF1 |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
Top |
Protein coding region RNA A-to-I editings for PHTF1 |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
Top |
The effects of the RNA editing to the miRNA binding sites for PHTF1 |
| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1535954 | chr14_101045974_+ | ENSG00000116793.16 | ENST00000369598.5 | PHTF1-202 | hsa-miR-381-3p | chr1 | 113697507 | 113697513 | 7mer-m8 | 113697506 | 113697532 | 143 | -15.98 |
| ADediting_1535954 | chr14_101045974_+ | ENSG00000116793.16 | ENST00000369600.5 | PHTF1-203 | hsa-miR-381-3p | chr1 | 113697507 | 113697513 | 7mer-m8 | 113697506 | 113697532 | 143 | -15.98 |
| ADediting_1535954 | chr14_101045974_+ | ENSG00000116793.16 | ENST00000369604.6 | PHTF1-204 | hsa-miR-381-3p | chr1 | 113697507 | 113697513 | 7mer-m8 | 113697506 | 113697532 | 143 | -15.98 |
| ADediting_1535954 | chr14_101045974_+ | ENSG00000116793.16 | ENST00000393357.6 | PHTF1-205 | hsa-miR-381-3p | chr1 | 113697507 | 113697513 | 7mer-m8 | 113697506 | 113697532 | 143 | -15.98 |
| ADediting_1596844 | chr1_162342605_+ | ENSG00000116793.16 | ENST00000412670.1 | PHTF1-206 | hsa-miR-556-3p | chr1 | 113705781 | 113705788 | 8mer-1a | 113705781 | 113705805 | 150 | -12.99 |
| ADediting_98288 | chr1_32086990_+ | ENSG00000116793.16 | ENST00000369604.6 | PHTF1-204 | hsa-miR-5585-3p | chr1 | 113697012 | 113697018 | 7mer-m8 | 113697011 | 113697033 | 143 | -11.09 |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1471003 | chr9_63819626_+ | ENSG00000116793.16 | ENST00000357783.6 | PHTF1-201 | hsa-miR-4477b | chr1 | 113703994 | 113704000 | 7mer-m8 | 113703993 | 113704011 | 155 | -16.81 |
| ADediting_1471004 | chr9_63819627_+ | ENSG00000116793.16 | ENST00000357783.6 | PHTF1-201 | hsa-miR-4477b | chr1 | 113703994 | 113704000 | 7mer-m8 | 113703993 | 113704011 | 155 | -16.81 |
| ADediting_291761 | chr11_93733708_- | ENSG00000116793.16 | ENST00000369598.5 | PHTF1-202 | hsa-miR-1304-3p | chr1 | 113697622 | 113697629 | 8mer-1a | 113697622 | 113697643 | 140 | -13.87 |
| ADediting_291761 | chr11_93733708_- | ENSG00000116793.16 | ENST00000369600.5 | PHTF1-203 | hsa-miR-1304-3p | chr1 | 113697622 | 113697629 | 8mer-1a | 113697622 | 113697643 | 140 | -13.87 |
| ADediting_291761 | chr11_93733708_- | ENSG00000116793.16 | ENST00000369604.6 | PHTF1-204 | hsa-miR-1304-3p | chr1 | 113697622 | 113697629 | 8mer-1a | 113697622 | 113697643 | 140 | -13.87 |
| ADediting_291761 | chr11_93733708_- | ENSG00000116793.16 | ENST00000393357.6 | PHTF1-205 | hsa-miR-1304-3p | chr1 | 113697622 | 113697629 | 8mer-1a | 113697622 | 113697643 | 140 | -13.87 |
| Differentially expressed gene-miRNA network |
Top |
The effects of the RNA editing to the stability of the RNA structures for PHTF1 |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
Top |
Relation with ADAR for PHTF1 |
| Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| CER | ADediting_9617 | chr1_113702495_- | 9.71239287711087e-10 | 0.473133560078377 | 1.33045661722686e-07 | 0.41459550317739 | 0.973504859536207 | -0.00273468893399429 |
| CER | ADediting_9618 | chr1_113702509_- | 1.3025907265137e-08 | 0.443624093346075 | 1.50856427504604e-08 | 0.441868610086623 | 0.375567290057481 | 0.0728625127487737 |
| CER | ADediting_9619 | chr1_113702548_- | 2.11767869705043e-18 | 0.636346938884167 | 2.11701324498303e-14 | 0.571846783718493 | 0.208126467744669 | 0.103364352502871 |
| CER | ADediting_9620 | chr1_113702560_- | 0.000137608617809793 | 0.306328694285683 | 7.71931673756915e-05 | 0.317042577659224 | 0.506080511020116 | 0.054710182562071 |
| CER | ADediting_9621 | chr1_113702583_- | 3.89537999365657e-13 | 0.54806916361405 | 4.72748745248065e-10 | 0.480844543975856 | 0.665062765352892 | 0.0356357859881017 |
| CER | ADediting_9622 | chr1_113702584_- | 5.89861909620317e-05 | 0.321892899054057 | 0.0156228395362121 | 0.197105334161387 | 0.934836036493247 | -0.00673207445859598 |
| CER | ADediting_9623 | chr1_113702586_- | 2.06973389014921e-17 | 0.621697054436825 | 1.75225981607926e-13 | 0.55478184324342 | 0.615332553799305 | 0.0413554122936476 |
| CER | ADediting_9624 | chr1_113703580_- | 2.87897503014878e-13 | 0.550627380957927 | 4.07258282078584e-15 | 0.584505023115109 | 0.0272774127485368 | 0.18027236104222 |
| CER | ADediting_9625 | chr1_113703593_- | 1.43515924811949e-06 | 0.381741235885343 | 3.8381388836737e-05 | 0.329474102059156 | 0.760473664949807 | -0.025097651786343 |
| CER | ADediting_9626 | chr1_113703633_- | 5.68412540730241e-08 | 0.425538057191301 | 1.27462986245081e-05 | 0.348057666040056 | 0.957441736179916 | -0.00439390408874452 |
| CER | ADediting_9627 | chr1_113703634_- | 1.0241461462612e-06 | 0.386623688527384 | 8.19380583780034e-05 | 0.315955695102362 | 0.305204073962706 | 0.0842743963168041 |
| CER | ADediting_9629 | chr1_113715389_- | 4.23557050120859e-05 | 0.327753480147534 | 2.53300470752834e-06 | 0.373337582887735 | 0.0166625755651616 | 0.195223431127633 |
| CER | ADediting_9630 | chr1_113715390_- | 6.63249427259755e-13 | 0.543512976483679 | 1.35089273089836e-12 | 0.53731365191009 | 0.0366530636993432 | 0.170788852665 |
| TCX | ADediting_9630 | chr1_113715390_- | 3.0157755746847e-06 | 0.370709296567641 | 9.09025875449615e-09 | 0.447884324084244 | 0.704866175255957 | 0.031178920470788 |
| CER | ADediting_9632 | chr1_113715398_- | 1.60455616422202e-12 | 0.535794806918227 | 9.08221628793719e-12 | 0.520057163085029 | 0.0292406741950253 | 0.178079078976769 |
| TCX | ADediting_9632 | chr1_113715398_- | 3.60974554845238e-05 | 0.330540277332905 | 5.81732851644224e-07 | 0.394635742449004 | 0.871505820855905 | -0.013317331815759 |
| CER | ADediting_9633 | chr1_113715445_- | 4.60732782373373e-11 | 0.504543134712106 | 1.07742476545604e-09 | 0.472006424450559 | 0.0265304312765869 | 0.181142378565927 |
| TCX | ADediting_9633 | chr1_113715445_- | 0.0993785372208683 | 0.135060963325287 | 1.47524856386654e-05 | 0.345660537689723 | 0.279394367507492 | -0.0888875054393381 |
| CER | ADediting_9634 | chr1_113715465_- | 7.27671605397476e-07 | 0.391490163602632 | 1.93968703437487e-06 | 0.377314421800763 | 0.120123273116829 | 0.127452586908937 |
| CER | ADediting_9635 | chr1_113715474_- | 4.945046395353e-10 | 0.480368263201941 | 3.48879200799406e-12 | 0.528843421563425 | 0.0440827440190209 | 0.164639273084957 |
| CER | ADediting_9636 | chr1_113715484_- | 2.64794526590269e-15 | 0.587722874168805 | 2.08774212101234e-14 | 0.571956016741467 | 0.00106165706758627 | 0.264722431227824 |
| CER | ADediting_9638 | chr1_113715490_- | 8.75592661308266e-12 | 0.520397835243152 | 3.1175679883566e-09 | 0.460222765191293 | 0.0209449287833205 | 0.188411494136248 |
| CER | ADediting_9639 | chr1_113715491_- | 2.81217970552512e-12 | 0.530788911761423 | 7.07872060183835e-11 | 0.500306412443608 | 0.0435165825997738 | 0.165075955264195 |
| CER | ADediting_9640 | chr1_113715500_- | 9.0230514624009e-07 | 0.388436369939999 | 1.90459161221887e-05 | 0.341423713600946 | 0.512311601069587 | 0.0539124042912407 |
| CER | ADediting_9641 | chr1_113715520_- | 1.45537359302783e-05 | 0.345883805309623 | 3.11031798227925e-08 | 0.433067855125603 | 0.0254439025949561 | 0.182446037482399 |
| CER | ADediting_9642 | chr1_113715536_- | 5.19738580091756e-14 | 0.564713944148082 | 1.76522924575449e-14 | 0.573269339928158 | 0.015242994536314 | 0.197820119304236 |
| CER | ADediting_9643 | chr1_113715548_- | 4.45152803707851e-08 | 0.42861268286957 | 3.16846291984862e-08 | 0.432839261170306 | 0.280149633626257 | 0.0887485575602128 |
| CER | ADediting_9644 | chr1_113715565_- | 3.53025878493384e-09 | 0.458814326894892 | 3.55221782023157e-08 | 0.431424504657025 | 0.263929947065393 | 0.091790118772455 |
| CER | ADediting_9646 | chr1_113715572_- | 3.37484654260433e-08 | 0.432059170375568 | 6.51697209278825e-05 | 0.320105051931222 | 0.0770269059739213 | 0.144822596985331 |
| DLPFC | ADediting_9647 | chr1_113715585_- | 6.14780924932051e-09 | 0.322574806942819 | 2.19563392234486e-10 | 0.350407255777422 | 0.0921415739042545 | 0.0958234287365032 |
| CER | ADediting_9647 | chr1_113715585_- | 8.20721396409788e-06 | 0.355161344833426 | 0.000203977830842603 | 0.298792109116464 | 0.0952690461061644 | 0.136714178569306 |
| CER | ADediting_9650 | chr1_113715615_- | 7.6597214290772e-11 | 0.499521835083677 | 3.9986504877688e-10 | 0.482610601757002 | 0.906082988427614 | -0.00971411592256691 |
| CER | ADediting_9651 | chr1_113716397_- | 0.000932706942497524 | 0.267560004897639 | 0.000121263346644571 | 0.30870730274976 | 0.915133271669436 | 0.00877431360604152 |
| CER | ADediting_9652 | chr1_113716410_- | 3.05669773586179e-07 | 0.403502220638826 | 5.01947933912255e-07 | 0.396691133265695 | 0.0496308099104971 | 0.160590589328964 |
| CER | ADediting_9656 | chr1_113716437_- | 1.73478316583945e-07 | 0.411099937632376 | 2.29444761280254e-06 | 0.374817668284286 | 0.12510972751821 | 0.125778351998833 |
| TCX | ADediting_9656 | chr1_113716437_- | 0.0341025721447029 | 0.173143495730544 | 1.40977381590773e-05 | 0.346407130320347 | 0.598081320287333 | -0.0433852325644929 |
| CER | ADediting_9657 | chr1_113716442_- | 9.05470777304145e-07 | 0.388386394004426 | 2.27635147499744e-06 | 0.374935836326328 | 0.528266511279188 | 0.0518921090923955 |
| CER | ADediting_9658 | chr1_113716452_- | 4.39357935864344e-06 | 0.364960327824147 | 1.2107157911826e-05 | 0.348896687456631 | 0.0719839185494536 | 0.147335408708018 |
| TCX | ADediting_9658 | chr1_113716452_- | 1.15746351704316e-05 | 0.349628338109906 | 1.40202153373848e-05 | 0.346497685078426 | 0.450540052541519 | -0.0620656715608961 |
| CER | ADediting_9660 | chr1_113716455_- | 7.5598324226216e-07 | 0.390950512516818 | 1.78245935839299e-06 | 0.378563182062538 | 0.0250223073433304 | 0.182964748069705 |
| TCX | ADediting_9660 | chr1_113716455_- | 0.000135892306911056 | 0.306565692248537 | 0.000157029101514211 | 0.303823531392759 | 0.282311495041935 | -0.0883522222309265 |
| FP | ADediting_9660 | chr1_113716455_- | 0.000172938435624948 | 0.277886008871324 | 1.47303129498671e-05 | 0.318494810706199 | 0.637062043664364 | -0.0356033127955618 |
| CER | ADediting_9661 | chr1_113716456_- | 0.000414902359493212 | 0.2846519118711 | 2.96235012299083e-05 | 0.333948647732826 | 0.0624862487473501 | 0.152484297043396 |
| CER | ADediting_9662 | chr1_113716460_- | 2.63843914955409e-05 | 0.335926925304635 | 0.0301168141544172 | 0.177140575312743 | 0.537567694896759 | -0.0507285710072705 |
| CER | ADediting_9663 | chr1_113716477_- | 4.51608557785184e-07 | 0.398155156556588 | 6.51900276996275e-08 | 0.423800728163028 | 0.0173420069152152 | 0.19404810762808 |
| CER | ADediting_9665 | chr1_113716509_- | 3.555743923952e-12 | 0.528671294042203 | 3.05560927858227e-11 | 0.508540925851761 | 0.0777582921203997 | 0.144469282943572 |
| CER | ADediting_9669 | chr1_113716528_- | 1.02806266457579e-06 | 0.386568895773868 | 1.33845636874258e-06 | 0.382757135364823 | 0.172140507880658 | 0.112067011143486 |
| CER | ADediting_9670 | chr1_113716531_- | 4.73406048112866e-11 | 0.504277143886541 | 8.27145121679203e-12 | 0.520927083573046 | 0.162277595039022 | 0.114684053344803 |
| CER | ADediting_9674 | chr1_113716562_- | 0.000131056142361648 | 0.307248829503362 | 0.000340997987870521 | 0.288632334605665 | 0.0717849946934357 | 0.147437415005656 |
| CER | ADediting_9675 | chr1_113716568_- | 1.2461189213007e-07 | 0.415452096828713 | 8.15613944710671e-09 | 0.449157063944595 | 0.00508823339724736 | 0.227626442855993 |
| CER | ADediting_9676 | chr1_113716569_- | 1.18077321494706e-07 | 0.416154865128643 | 4.73922546514718e-06 | 0.363789821669576 | 0.339588705893578 | 0.0785099826898211 |
| TCX | ADediting_9676 | chr1_113716569_- | 0.000506215176644677 | 0.280554906989919 | 4.60867500978086e-07 | 0.39787455137066 | 0.485406083810659 | 0.057394735242824 |
| CER | ADediting_9677 | chr1_113716577_- | 2.23828885946219e-10 | 0.488654152066293 | 1.98276104769487e-08 | 0.438573373601424 | 0.0530665486957629 | 0.158268425722872 |
| TCX | ADediting_9677 | chr1_113716577_- | 3.43148342452582e-06 | 0.3687487765837 | 5.26703910932983e-06 | 0.362149991256309 | 0.984534475353391 | -0.00159607854152852 |
| STG | ADediting_9677 | chr1_113716577_- | 0.117003496204455 | 0.172325600067898 | 0.00457837123062067 | 0.30646683439465 | 0.930729082741967 | 0.00962863192286433 |
| CER | ADediting_9680 | chr1_113716622_- | 3.87987733520869e-07 | 0.400246451018115 | 1.83420158854732e-09 | 0.466161622939291 | 0.0383240645405918 | 0.169320075035213 |
| CER | ADediting_9681 | chr1_113716623_- | 8.61322294294588e-12 | 0.520550715470416 | 5.87043697364364e-11 | 0.502160043850392 | 0.027023352468708 | 0.180565957694258 |
| TCX | ADediting_9681 | chr1_113716623_- | 1.38395649064744e-06 | 0.382270727862048 | 1.57573585266258e-06 | 0.380374995826151 | 0.850906098598063 | -0.0154756103124147 |
| CER | ADediting_9682 | chr1_113716625_- | 1.46791903259764e-11 | 0.515551344779482 | 1.36966255640008e-09 | 0.469383553766885 | 0.0155286385489542 | 0.197281176205309 |
| TCX | ADediting_9682 | chr1_113716625_- | 1.61190824219185e-07 | 0.412071654030189 | 1.78184208541788e-07 | 0.410745143670257 | 0.463689107772639 | -0.0602815484736078 |
| FP | ADediting_9682 | chr1_113716625_- | 3.68031081357858e-05 | 0.304093333640586 | 4.97248539815609e-05 | 0.299191655629559 | 0.163226052761802 | 0.10495802022485 |
| CER | ADediting_9683 | chr1_113716631_- | 4.03717816171924e-11 | 0.505834788052793 | 1.13897556226072e-10 | 0.495545334085034 | 0.0882995775274802 | 0.139652096188383 |
| TCX | ADediting_9683 | chr1_113716631_- | 0.000221592993980213 | 0.297179621915542 | 2.15394754488212e-05 | 0.339360866104182 | 0.159204725772655 | -0.115523607152203 |
| CER | ADediting_9695 | chr1_113721061_- | 9.46206768488156e-09 | 0.447412466849172 | 0.00127908578121709 | 0.260584921685515 | 0.885878467917148 | -0.0118169124358205 |
| CER | ADediting_9696 | chr1_113721091_- | 5.43141738066878e-05 | 0.323364327380901 | 0.00444616263681261 | 0.231045556625515 | 0.925268675784221 | 0.00772316559161367 |
| DLPFC | ADediting_9717 | chr1_113721944_- | 0.959626131486913 | -0.00288683532330587 | 0.0165190541692968 | -0.13606999661513 | 1.79537519973298e-18 | 0.470387093456048 |
| DLPFC | ADediting_9722 | chr1_113722195_- | 1.14161771003713e-06 | 0.272206423989969 | 0.000209790169810137 | 0.209052813574012 | 3.74864298575953e-08 | 0.306208163117048 |
| DLPFC | ADediting_9723 | chr1_113722207_- | 0.000523805709018589 | 0.195864846593055 | 0.0277631512448144 | 0.125001005724438 | 3.55581156449762e-08 | 0.306700622039781 |
| DLPFC | ADediting_9724 | chr1_113722208_- | 1.85586216211123e-05 | 0.240567609520529 | 0.0105773913835568 | 0.145009039356978 | 3.43254363196515e-13 | 0.397698589636255 |
| CER | ADediting_9765 | chr1_113723322_- | 9.11993536691954e-05 | 0.313994060832691 | 0.00460154367912433 | 0.23017940318467 | 0.895122089790389 | -0.0108540124354677 |
| CER | ADediting_9768 | chr1_113723351_- | 6.43310227307076e-06 | 0.359019272285491 | 0.000226162617598414 | 0.296780806862632 | 0.296840981803386 | -0.0857397992898249 |
| CER | ADediting_9774 | chr1_113723381_- | 8.43673152344384e-06 | 0.354721268703236 | 0.00031830762423777 | 0.290015829040802 | 0.479744818691438 | -0.0581404133050363 |
| CER | ADediting_9776 | chr1_113723391_- | 3.42725089060609e-05 | 0.331438784184978 | 0.000162062875746801 | 0.303221427885892 | 0.794835957480633 | 0.0214085139107747 |
| CER | ADediting_9778 | chr1_113723397_- | 2.26659777079336e-06 | 0.374999898952909 | 0.0010531858235223 | 0.264898874221908 | 0.213461907897727 | -0.102169175204658 |
| CER | ADediting_9779 | chr1_113723405_- | 1.93550724519833e-06 | 0.377346353609045 | 0.00275513859396315 | 0.242806241893275 | 0.596273108907414 | -0.043599491348135 |
| CER | ADediting_9782 | chr1_113723450_- | 4.09626226751667e-07 | 0.399500624072093 | 0.00860861577035435 | 0.213813529668775 | 0.752168335121086 | -0.0259965689993428 |
| CER | ADediting_9783 | chr1_113723451_- | 2.36768941518725e-07 | 0.406951449141972 | 0.00145921518669903 | 0.257618728622602 | 0.517741609109804 | -0.0532212661513264 |
| CER | ADediting_9785 | chr1_113723469_- | 2.52775896046873e-05 | 0.336655649611324 | 0.0413908823900825 | 0.166759144519759 | 0.842594182125713 | 0.0163493747648059 |
| CER | ADediting_9786 | chr1_113724348_- | 0.000188170796605009 | 0.300353366315478 | 0.0401678966086005 | 0.167760645140812 | 0.245809173345226 | -0.0953432207003974 |
| DLPFC | ADediting_9790 | chr1_113724395_- | 0.26321486402189 | 0.0637378354399731 | 0.281246399232305 | -0.0613894896953903 | 1.47635602883078e-08 | 0.314767362725841 |
| CER | ADediting_9790 | chr1_113724395_- | 4.32352675375118e-05 | 0.327393256498626 | 0.0544640530387244 | 0.1573593682372 | 0.452568073959346 | 0.0617886260900255 |
| DLPFC | ADediting_9791 | chr1_113724399_- | 0.119746597179904 | 0.088549720753801 | 0.477997803655101 | -0.0404452948470059 | 3.51278190767617e-10 | 0.346645378386353 |
| CER | ADediting_9791 | chr1_113724399_- | 6.69676812092625e-05 | 0.319615023497138 | 0.044024881987206 | 0.164683686508922 | 0.544603813527773 | 0.049855026090703 |
| CER | ADediting_9794 | chr1_113724427_- | 8.46606068319654e-05 | 0.315358359996858 | 0.0287852967165632 | 0.178576365192094 | 0.430208601877344 | 0.0648829571677646 |
| TCX | ADediting_9852 | chr1_113748075_- | 3.93103435669289e-05 | 0.329057423398492 | 1.86745982162776e-05 | 0.341752467626766 | 0.290354308063523 | -0.0868953334211709 |
| CER | ADediting_9855 | chr1_113748224_- | 5.89482077256162e-05 | 0.321904414552167 | 2.2023184727402e-06 | 0.375428758619009 | 0.518054736773387 | -0.0531815246230814 |
| TCX | ADediting_9856 | chr1_113748251_- | 0.0513416824661962 | 0.159418139382638 | 5.34543100748688e-05 | 0.32364800976931 | 0.322710240312715 | -0.0812899602369009 |
| DLPFC | ADediting_9859 | chr1_113748672_- | 0.0735505761013242 | 0.101778130018441 | 0.735748889930476 | -0.0192440088327866 | 5.63309244982046e-15 | 0.424265461548743 |
| Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 8.45921076010881e-62 | 0.768958075610863 | 8.01967087634855e-88 | 0.850208749035652 | 0.00176382430346127 | 0.176933583652205 |
| AC | 6.63634711626997e-48 | 0.757879663868427 | 2.67983831222832e-38 | 0.701128989077781 | 1.15270936827288e-09 | 0.372853672089697 |
| PCC | 2.78283009848801e-28 | 0.689505628572427 | 2.64102920545658e-31 | 0.715874370240365 | 2.2266831204224e-07 | 0.364203371891509 |
| CER | 9.38771627208653e-35 | 0.800732239049648 | 1.53148773037594e-27 | 0.742520959263502 | 0.0403386561740986 | 0.167619286615429 |
| TCX | 1.12103987634286e-28 | 0.752883467015572 | 2.43901312442685e-44 | 0.856430252661135 | 0.190480324803222 | -0.107481628848679 |
| FP | 2.55760292225797e-28 | 0.70736609543179 | 1.18028632099827e-40 | 0.798566585820047 | 0.000985996185477756 | 0.244887119777707 |
| IFG | 1.84290140712347e-07 | 0.836943185294957 | 3.52321159499972e-07 | 0.826688553922299 | 0.147662581590243 | 0.298198101124692 |
| PG | 5.70697442841776e-61 | 0.878628968510209 | 2.97501301828808e-50 | 0.837850824616649 | 0.314773182979759 | -0.0741071806495628 |
| STG | 4.66317576085837e-21 | 0.814184637801043 | 1.41299382050992e-19 | 0.796142583633472 | 0.206426121474949 | 0.139267972423746 |
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Relation with AD stages for PHTF1 |
| Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| CER | ADediting_9624 | chr1_113703580_- | 0.000227232699534795 | 0.347660175236915 |
| CER | ADediting_9630 | chr1_113715390_- | 9.37730597015698e-05 | 0.366941624944672 |
| CER | ADediting_9632 | chr1_113715398_- | 0.000223795684525555 | 0.348002822717937 |
| CER | ADediting_9633 | chr1_113715445_- | 0.000828529327850437 | 0.317036891266128 |
| CER | ADediting_9635 | chr1_113715474_- | 0.000151072814268541 | 0.356705633840273 |
| CER | ADediting_9636 | chr1_113715484_- | 4.80670310951788e-05 | 0.380732003231073 |
| CER | ADediting_9641 | chr1_113715520_- | 0.000592585980820876 | 0.325280154320104 |
| CER | ADediting_9642 | chr1_113715536_- | 5.53476297011513e-06 | 0.421542991559317 |
| CER | ADediting_9652 | chr1_113716410_- | 1.75437047477929e-07 | 0.477363482210583 |
| CER | ADediting_9656 | chr1_113716437_- | 1.65204950305399e-05 | 0.401565121423433 |
| CER | ADediting_9657 | chr1_113716442_- | 3.17957238727744e-05 | 0.388960554700733 |
| CER | ADediting_9658 | chr1_113716452_- | 0.000448027554651269 | 0.331985386537175 |
| CER | ADediting_9659 | chr1_113716453_- | 0.000510041995474283 | 0.328895850620772 |
| CER | ADediting_9660 | chr1_113716455_- | 0.000439598567776108 | 0.332435324274957 |
| CER | ADediting_9665 | chr1_113716509_- | 0.000219165121216652 | 0.348472240313637 |
| CER | ADediting_9675 | chr1_113716568_- | 4.92937025620036e-05 | 0.380223074012606 |
| CER | ADediting_9677 | chr1_113716577_- | 0.00091613923048689 | 0.314518622521752 |
| CER | ADediting_9682 | chr1_113716625_- | 0.00145476241739908 | 0.302642372512841 |
| IFG | ADediting_9676 | chr1_113716569_- | 0.0112614191895443 | 0.498187153213234 |
| IFG | ADediting_9677 | chr1_113716577_- | 0.0113059937049014 | 0.497952103823781 |
| IFG | ADediting_9774 | chr1_113723381_- | 0.0354713369979928 | 0.422303326441651 |
| Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
| CER | 5.40243060040548e-06 | 0.421970976686525 |
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RelatedDrugs for PHTF1 |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for PHTF1 |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
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