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| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for RBBP9 |
 Gene summary |
| Gene information | Gene symbol | RBBP9 | Gene ID | 10741 |
| Gene name | RB binding protein 9, serine hydrolase | |
| Synonyms | BOG|RBBP10 | |
| Cytomap | 20p11.23 | |
| Type of gene | protein-coding | |
| Description | serine hydrolase RBBP9B5T overexpressed gene proteinRBBP-10RBBP-9putative hydrolase RBBP9retinoblastoma-binding protein 10retinoblastoma-binding protein 9retinoma-binding protein 9 | |
| Modification date | 20200313 | |
| UniProtAcc | O75884, | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
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RNA A-to-I events for RBBP9 |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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| RNA editing frequencies across three data sets. |
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| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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| RNA A-to-I editing events in AD. |
| ADediting_914445(18487686, -), ADediting_914446(18487689, -), ADediting_914447(18487693, -), ADediting_914448(18487695, -), ADediting_914449(18487707, -), ADediting_914450(18487708, -), ADediting_914451(18487709, -), ADediting_914452(18487717, -), ADediting_914453(18487734, -), ADediting_914454(18487735, -), ADediting_914455(18487760, -), ADediting_914456(18487769, -), ADediting_914457(18487772, -), ADediting_914458(18487780, -), ADediting_914459(18487786, -), ADediting_914460(18487803, -), ADediting_914461(18487804, -), ADediting_914462(18487824, -), ADediting_914463(18487828, -), ADediting_914464(18487829, -), ADediting_914465(18487830, -), ADediting_914466(18487833, -), ADediting_914467(18487840, -), ADediting_914468(18487843, -), ADediting_914469(18487852, -), ADediting_914470(18487867, -), ADediting_914471(18487868, -), ADediting_914472(18487893, -), ADediting_914473(18487898, -), ADediting_914474(18487903, -), ADediting_914475(18487907, -), ADediting_914476(18487918, -), ADediting_914477(18487925, -), ADediting_914478(18487945, -), ADediting_914479(18488337, -), ADediting_914480(18488361, -), ADediting_914481(18488381, -), ADediting_914482(18488387, -), ADediting_914483(18488404, -), ADediting_914484(18488410, -), ADediting_914485(18488422, -), ADediting_914486(18488426, -), ADediting_914487(18488430, -), ADediting_914488(18488435, -), ADediting_914489(18488437, -), ADediting_914490(18488438, -), ADediting_914491(18488441, -), ADediting_914492(18488443, -), ADediting_914493(18488445, -), ADediting_914494(18488448, -), ADediting_914495(18488454, -), ADediting_914496(18488461, -), ADediting_914497(18488462, -), ADediting_914498(18488465, -), ADediting_914499(18488469, -), ADediting_914500(18488475, -), ADediting_914501(18488479, -), ADediting_914502(18488493, -), ADediting_914503(18488498, -), ADediting_914504(18488506, -), ADediting_914505(18488516, -), ADediting_914506(18488533, -), ADediting_914507(18488538, -), ADediting_914508(18488539, -), ADediting_914509(18488547, -), ADediting_1565226(18487722, -), ADediting_1565227(18488297, -), ADediting_1565228(18488345, -), |
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RNA editing positional annotations for RBBP9 using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_914445 | chr20_18487686_- | UTR3 |
| ADediting_914446 | chr20_18487689_- | UTR3 |
| ADediting_914447 | chr20_18487693_- | UTR3 |
| ADediting_914448 | chr20_18487695_- | UTR3 |
| ADediting_914449 | chr20_18487707_- | UTR3 |
| ADediting_914450 | chr20_18487708_- | UTR3 |
| ADediting_914451 | chr20_18487709_- | UTR3 |
| ADediting_914452 | chr20_18487717_- | UTR3 |
| ADediting_914453 | chr20_18487734_- | UTR3 |
| ADediting_914454 | chr20_18487735_- | UTR3 |
| ADediting_914455 | chr20_18487760_- | UTR3 |
| ADediting_914456 | chr20_18487769_- | UTR3 |
| ADediting_914457 | chr20_18487772_- | UTR3 |
| ADediting_914458 | chr20_18487780_- | UTR3 |
| ADediting_914459 | chr20_18487786_- | UTR3 |
| ADediting_914460 | chr20_18487803_- | UTR3 |
| ADediting_914461 | chr20_18487804_- | UTR3 |
| ADediting_914462 | chr20_18487824_- | UTR3 |
| ADediting_914463 | chr20_18487828_- | UTR3 |
| ADediting_914464 | chr20_18487829_- | UTR3 |
| ADediting_914465 | chr20_18487830_- | UTR3 |
| ADediting_914466 | chr20_18487833_- | UTR3 |
| ADediting_914467 | chr20_18487840_- | UTR3 |
| ADediting_914468 | chr20_18487843_- | UTR3 |
| ADediting_914469 | chr20_18487852_- | UTR3 |
| ADediting_914470 | chr20_18487867_- | UTR3 |
| ADediting_914471 | chr20_18487868_- | UTR3 |
| ADediting_914472 | chr20_18487893_- | UTR3 |
| ADediting_914473 | chr20_18487898_- | UTR3 |
| ADediting_914474 | chr20_18487903_- | UTR3 |
| ADediting_914475 | chr20_18487907_- | UTR3 |
| ADediting_914476 | chr20_18487918_- | UTR3 |
| ADediting_914477 | chr20_18487925_- | UTR3 |
| ADediting_914478 | chr20_18487945_- | UTR3 |
| ADediting_914479 | chr20_18488337_- | UTR3 |
| ADediting_914480 | chr20_18488361_- | UTR3 |
| ADediting_914481 | chr20_18488381_- | UTR3 |
| ADediting_914482 | chr20_18488387_- | UTR3 |
| ADediting_914483 | chr20_18488404_- | UTR3 |
| ADediting_914484 | chr20_18488410_- | UTR3 |
| ADediting_914485 | chr20_18488422_- | UTR3 |
| ADediting_914486 | chr20_18488426_- | UTR3 |
| ADediting_914487 | chr20_18488430_- | UTR3 |
| ADediting_914488 | chr20_18488435_- | UTR3 |
| ADediting_914489 | chr20_18488437_- | UTR3 |
| ADediting_914490 | chr20_18488438_- | UTR3 |
| ADediting_914491 | chr20_18488441_- | UTR3 |
| ADediting_914492 | chr20_18488443_- | UTR3 |
| ADediting_914493 | chr20_18488445_- | UTR3 |
| ADediting_914494 | chr20_18488448_- | UTR3 |
| ADediting_914495 | chr20_18488454_- | UTR3 |
| ADediting_914496 | chr20_18488461_- | UTR3 |
| ADediting_914497 | chr20_18488462_- | UTR3 |
| ADediting_914498 | chr20_18488465_- | UTR3 |
| ADediting_914499 | chr20_18488469_- | UTR3 |
| ADediting_914500 | chr20_18488475_- | UTR3 |
| ADediting_914501 | chr20_18488479_- | UTR3 |
| ADediting_914502 | chr20_18488493_- | UTR3 |
| ADediting_914503 | chr20_18488498_- | UTR3 |
| ADediting_914504 | chr20_18488506_- | UTR3 |
| ADediting_914505 | chr20_18488516_- | UTR3 |
| ADediting_914506 | chr20_18488533_- | UTR3 |
| ADediting_914507 | chr20_18488538_- | UTR3 |
| ADediting_914508 | chr20_18488539_- | UTR3 |
| ADediting_914509 | chr20_18488547_- | UTR3 |
| ADediting_1565226 | chr20_18487722_- | UTR3 |
| ADediting_1565227 | chr20_18488297_- | UTR3 |
| ADediting_1565228 | chr20_18488345_- | UTR3 |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_914445 | chr20_18487686_- | SINE | Alu | Name=AluSz6 |
| ADediting_914446 | chr20_18487689_- | SINE | Alu | Name=AluSz6 |
| ADediting_914447 | chr20_18487693_- | SINE | Alu | Name=AluSz6 |
| ADediting_914448 | chr20_18487695_- | SINE | Alu | Name=AluSz6 |
| ADediting_914449 | chr20_18487707_- | SINE | Alu | Name=AluSz6 |
| ADediting_914450 | chr20_18487708_- | SINE | Alu | Name=AluSz6 |
| ADediting_914451 | chr20_18487709_- | SINE | Alu | Name=AluSz6 |
| ADediting_914452 | chr20_18487717_- | SINE | Alu | Name=AluSz6 |
| ADediting_914453 | chr20_18487734_- | SINE | Alu | Name=AluSz6 |
| ADediting_914454 | chr20_18487735_- | SINE | Alu | Name=AluSz6 |
| ADediting_914455 | chr20_18487760_- | SINE | Alu | Name=AluSz6 |
| ADediting_914456 | chr20_18487769_- | SINE | Alu | Name=AluSz6 |
| ADediting_914457 | chr20_18487772_- | SINE | Alu | Name=AluSz6 |
| ADediting_914458 | chr20_18487780_- | SINE | Alu | Name=AluSz6 |
| ADediting_914459 | chr20_18487786_- | SINE | Alu | Name=AluSz6 |
| ADediting_914460 | chr20_18487803_- | SINE | Alu | Name=AluSz6 |
| ADediting_914461 | chr20_18487804_- | SINE | Alu | Name=AluSz6 |
| ADediting_914462 | chr20_18487824_- | SINE | Alu | Name=AluSz6 |
| ADediting_914463 | chr20_18487828_- | SINE | Alu | Name=AluSz6 |
| ADediting_914464 | chr20_18487829_- | SINE | Alu | Name=AluSz6 |
| ADediting_914465 | chr20_18487830_- | SINE | Alu | Name=AluSz6 |
| ADediting_914466 | chr20_18487833_- | SINE | Alu | Name=AluSz6 |
| ADediting_914467 | chr20_18487840_- | SINE | Alu | Name=AluSz6 |
| ADediting_914468 | chr20_18487843_- | SINE | Alu | Name=AluSz6 |
| ADediting_914469 | chr20_18487852_- | SINE | Alu | Name=AluSz6 |
| ADediting_914470 | chr20_18487867_- | SINE | Alu | Name=AluSz6 |
| ADediting_914471 | chr20_18487868_- | SINE | Alu | Name=AluSz6 |
| ADediting_914472 | chr20_18487893_- | SINE | Alu | Name=AluSz6 |
| ADediting_914473 | chr20_18487898_- | SINE | Alu | Name=AluSz6 |
| ADediting_914474 | chr20_18487903_- | SINE | Alu | Name=AluSz6 |
| ADediting_914475 | chr20_18487907_- | SINE | Alu | Name=AluSz6 |
| ADediting_914476 | chr20_18487918_- | SINE | Alu | Name=AluSz6 |
| ADediting_914477 | chr20_18487925_- | SINE | Alu | Name=AluSz6 |
| ADediting_914478 | chr20_18487945_- | SINE | Alu | Name=AluSz6 |
| ADediting_914479 | chr20_18488337_- | SINE | Alu | Name=AluJr |
| ADediting_914480 | chr20_18488361_- | SINE | Alu | Name=AluJr |
| ADediting_914481 | chr20_18488381_- | SINE | Alu | Name=AluJr |
| ADediting_914482 | chr20_18488387_- | SINE | Alu | Name=AluJr |
| ADediting_914483 | chr20_18488404_- | SINE | Alu | Name=AluJr |
| ADediting_914484 | chr20_18488410_- | SINE | Alu | Name=AluJr |
| ADediting_914485 | chr20_18488422_- | SINE | Alu | Name=AluJr |
| ADediting_914486 | chr20_18488426_- | SINE | Alu | Name=AluJr |
| ADediting_914487 | chr20_18488430_- | SINE | Alu | Name=AluJr |
| ADediting_914488 | chr20_18488435_- | SINE | Alu | Name=AluJr |
| ADediting_914489 | chr20_18488437_- | SINE | Alu | Name=AluJr |
| ADediting_914490 | chr20_18488438_- | SINE | Alu | Name=AluJr |
| ADediting_914491 | chr20_18488441_- | SINE | Alu | Name=AluJr |
| ADediting_914492 | chr20_18488443_- | SINE | Alu | Name=AluJr |
| ADediting_914493 | chr20_18488445_- | SINE | Alu | Name=AluJr |
| ADediting_914494 | chr20_18488448_- | SINE | Alu | Name=AluJr |
| ADediting_914495 | chr20_18488454_- | SINE | Alu | Name=AluJr |
| ADediting_914496 | chr20_18488461_- | SINE | Alu | Name=AluJr |
| ADediting_914497 | chr20_18488462_- | SINE | Alu | Name=AluJr |
| ADediting_914498 | chr20_18488465_- | SINE | Alu | Name=AluJr |
| ADediting_914499 | chr20_18488469_- | SINE | Alu | Name=AluJr |
| ADediting_914500 | chr20_18488475_- | SINE | Alu | Name=AluJr |
| ADediting_914501 | chr20_18488479_- | SINE | Alu | Name=AluJr |
| ADediting_914502 | chr20_18488493_- | SINE | Alu | Name=AluJr |
| ADediting_914503 | chr20_18488498_- | SINE | Alu | Name=AluJr |
| ADediting_914504 | chr20_18488506_- | SINE | Alu | Name=AluJr |
| ADediting_914505 | chr20_18488516_- | SINE | Alu | Name=AluJr |
| ADediting_914506 | chr20_18488533_- | SINE | Alu | Name=AluJr |
| ADediting_914507 | chr20_18488538_- | SINE | Alu | Name=AluJr |
| ADediting_914508 | chr20_18488539_- | SINE | Alu | Name=AluJr |
| ADediting_914509 | chr20_18488547_- | SINE | Alu | Name=AluJr |
| ADediting_1565226 | chr20_18487722_- | SINE | Alu | Name=AluSz6 |
| ADediting_1565227 | chr20_18488297_- | SINE | Alu | Name=AluJr |
| ADediting_1565228 | chr20_18488345_- | SINE | Alu | Name=AluJr |
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RNA A-to-I editing events in the alternative splicing sites for RBBP9 |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for RBBP9 |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |