|
||||||
|
 | |
| |
| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
| |
| |
| The effects of the RNA editing to the stability of the RNA structures |
| |
| |
| |
|
Gene summary for SPTLC1 |
 Gene summary |
| Gene information | Gene symbol | SPTLC1 | Gene ID | 10558 |
| Gene name | serine palmitoyltransferase long chain base subunit 1 | |
| Synonyms | HSAN1|HSN1|LBC1|LCB1|SPT1|SPTI | |
| Cytomap | 9q22.31 | |
| Type of gene | protein-coding | |
| Description | serine palmitoyltransferase 1long chain base biosynthesis protein 1serine C-palmitoyltransferaseserine-palmitoyl-CoA transferase 1 | |
| Modification date | 20200313 | |
| UniProtAcc | O15269, | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
| SPTLC1 | GO:0030148 | sphingolipid biosynthetic process | 25332431 |
| SPTLC1 | GO:0046513 | ceramide biosynthetic process | 25691431 |
| SPTLC1 | GO:1904504 | positive regulation of lipophagy | 25332431 |
Top |
RNA A-to-I events for SPTLC1 |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA editing frequencies across three data sets. |
 |
| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA A-to-I editing events in AD. |
| ADediting_1478853(92032621, -), ADediting_1478854(92032633, -), ADediting_1478855(92032634, -), ADediting_1478856(92032651, -), ADediting_1478857(92032683, -), ADediting_1478858(92032687, -), ADediting_1478859(92032752, -), ADediting_1478860(92032754, -), ADediting_1478861(92032764, -), ADediting_1478862(92032767, -), ADediting_1478863(92032837, -), ADediting_1478864(92033618, -), ADediting_1478865(92033628, -), ADediting_1478866(92033640, -), ADediting_1478867(92033684, -), ADediting_1478868(92033688, -), ADediting_1478869(92033720, -), ADediting_1478870(92033741, -), ADediting_1478871(92033750, -), ADediting_1478872(92033760, -), ADediting_1478873(92033763, -), ADediting_1478874(92033765, -), ADediting_1478875(92033766, -), ADediting_1478876(92033768, -), ADediting_1478877(92033771, -), ADediting_1478878(92033774, -), ADediting_1478879(92033789, -), ADediting_1478880(92033810, -), ADediting_1478881(92033812, -), ADediting_1478882(92033818, -), ADediting_1478883(92033825, -), ADediting_1478884(92033841, -), ADediting_1478885(92050889, -), ADediting_1478886(92050910, -), ADediting_1478887(92050915, -), ADediting_1478888(92050924, -), ADediting_1478889(92050957, -), ADediting_1478890(92052805, -), ADediting_1478891(92052813, -), ADediting_1478892(92054037, -), ADediting_1478893(92054071, -), ADediting_1478894(92054156, -), ADediting_1478895(92054268, -), ADediting_1478896(92054669, -), ADediting_1478897(92054670, -), ADediting_1478898(92054733, -), ADediting_1478899(92054813, -), ADediting_1478900(92054827, -), ADediting_1478901(92054830, -), ADediting_1478902(92054831, -), ADediting_1478903(92054855, -), ADediting_1478904(92054865, -), ADediting_1478905(92055169, -), ADediting_1478906(92055174, -), ADediting_1478907(92071115, -), ADediting_1478908(92071124, -), ADediting_1478909(92071133, -), ADediting_1478910(92071224, -), ADediting_1478911(92071227, -), ADediting_1478912(92071272, -), ADediting_1478913(92071276, -), ADediting_1478914(92071278, -), ADediting_1478915(92071300, -), ADediting_1478916(92071337, -), ADediting_1478917(92071353, -), ADediting_1478918(92071361, -), ADediting_1478919(92071373, -), ADediting_1478920(92071387, -), ADediting_1478921(92071397, -), ADediting_1478922(92078519, -), ADediting_1478923(92078534, -), ADediting_1478924(92078570, -), ADediting_1478925(92078610, -), ADediting_1478926(92078706, -), ADediting_1478927(92078744, -), ADediting_1478928(92079148, -), ADediting_1478929(92079161, -), ADediting_1478930(92079165, -), ADediting_1478931(92079173, -), ADediting_1478932(92079181, -), ADediting_1478933(92079184, -), ADediting_1478934(92079204, -), ADediting_1478935(92079208, -), ADediting_1478936(92079213, -), ADediting_1478937(92079214, -), ADediting_1478938(92079220, -), ADediting_1478939(92079222, -), ADediting_1478940(92079240, -), ADediting_1478941(92079255, -), ADediting_1478942(92079258, -), ADediting_1478943(92079269, -), ADediting_1478944(92079270, -), ADediting_1478945(92079277, -), ADediting_1478946(92079303, -), ADediting_1478947(92079318, -), ADediting_1478948(92079322, -), ADediting_1478949(92079326, -), ADediting_1478950(92079332, -), ADediting_1478951(92079333, -), ADediting_1478952(92079348, -), ADediting_1478953(92079349, -), ADediting_1478954(92079367, -), ADediting_1478956(92107588, -), ADediting_1478957(92107628, -), ADediting_1594282(92032624, -), ADediting_1594283(92032695, -), ADediting_1594284(92033677, -), ADediting_1594285(92033740, -), ADediting_1594286(92033742, -), ADediting_1594287(92033801, -), ADediting_1594288(92033827, -), ADediting_1594289(92055164, -), ADediting_1594290(92078597, -), ADediting_1594291(92078721, -), ADediting_1594292(92078728, -), ADediting_1594293(92079197, -), |
Top |
RNA editing positional annotations for SPTLC1 using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_1478853 | chr9_92032621_- | intronic |
| ADediting_1478854 | chr9_92032633_- | intronic |
| ADediting_1478855 | chr9_92032634_- | intronic |
| ADediting_1478856 | chr9_92032651_- | intronic |
| ADediting_1478857 | chr9_92032683_- | intronic |
| ADediting_1478858 | chr9_92032687_- | intronic |
| ADediting_1478859 | chr9_92032752_- | intronic |
| ADediting_1478860 | chr9_92032754_- | intronic |
| ADediting_1478861 | chr9_92032764_- | intronic |
| ADediting_1478862 | chr9_92032767_- | intronic |
| ADediting_1478863 | chr9_92032837_- | intronic |
| ADediting_1478864 | chr9_92033618_- | intronic |
| ADediting_1478865 | chr9_92033628_- | intronic |
| ADediting_1478866 | chr9_92033640_- | intronic |
| ADediting_1478867 | chr9_92033684_- | intronic |
| ADediting_1478868 | chr9_92033688_- | intronic |
| ADediting_1478869 | chr9_92033720_- | intronic |
| ADediting_1478870 | chr9_92033741_- | intronic |
| ADediting_1478871 | chr9_92033750_- | intronic |
| ADediting_1478872 | chr9_92033760_- | intronic |
| ADediting_1478873 | chr9_92033763_- | intronic |
| ADediting_1478874 | chr9_92033765_- | intronic |
| ADediting_1478875 | chr9_92033766_- | intronic |
| ADediting_1478876 | chr9_92033768_- | intronic |
| ADediting_1478877 | chr9_92033771_- | intronic |
| ADediting_1478878 | chr9_92033774_- | intronic |
| ADediting_1478879 | chr9_92033789_- | intronic |
| ADediting_1478880 | chr9_92033810_- | intronic |
| ADediting_1478881 | chr9_92033812_- | intronic |
| ADediting_1478882 | chr9_92033818_- | intronic |
| ADediting_1478883 | chr9_92033825_- | intronic |
| ADediting_1478884 | chr9_92033841_- | intronic |
| ADediting_1478885 | chr9_92050889_- | intronic |
| ADediting_1478886 | chr9_92050910_- | intronic |
| ADediting_1478887 | chr9_92050915_- | intronic |
| ADediting_1478888 | chr9_92050924_- | intronic |
| ADediting_1478889 | chr9_92050957_- | intronic |
| ADediting_1478890 | chr9_92052805_- | intronic |
| ADediting_1478891 | chr9_92052813_- | intronic |
| ADediting_1478892 | chr9_92054037_- | intronic |
| ADediting_1478893 | chr9_92054071_- | intronic |
| ADediting_1478894 | chr9_92054156_- | intronic |
| ADediting_1478895 | chr9_92054268_- | intronic |
| ADediting_1478896 | chr9_92054669_- | intronic |
| ADediting_1478897 | chr9_92054670_- | intronic |
| ADediting_1478898 | chr9_92054733_- | intronic |
| ADediting_1478899 | chr9_92054813_- | intronic |
| ADediting_1478900 | chr9_92054827_- | intronic |
| ADediting_1478901 | chr9_92054830_- | intronic |
| ADediting_1478902 | chr9_92054831_- | intronic |
| ADediting_1478903 | chr9_92054855_- | intronic |
| ADediting_1478904 | chr9_92054865_- | intronic |
| ADediting_1478905 | chr9_92055169_- | intronic |
| ADediting_1478906 | chr9_92055174_- | intronic |
| ADediting_1478907 | chr9_92071115_- | intronic |
| ADediting_1478908 | chr9_92071124_- | intronic |
| ADediting_1478909 | chr9_92071133_- | intronic |
| ADediting_1478910 | chr9_92071224_- | intronic |
| ADediting_1478911 | chr9_92071227_- | intronic |
| ADediting_1478912 | chr9_92071272_- | intronic |
| ADediting_1478913 | chr9_92071276_- | intronic |
| ADediting_1478914 | chr9_92071278_- | intronic |
| ADediting_1478915 | chr9_92071300_- | intronic |
| ADediting_1478916 | chr9_92071337_- | intronic |
| ADediting_1478917 | chr9_92071353_- | intronic |
| ADediting_1478918 | chr9_92071361_- | intronic |
| ADediting_1478919 | chr9_92071373_- | intronic |
| ADediting_1478920 | chr9_92071387_- | intronic |
| ADediting_1478921 | chr9_92071397_- | intronic |
| ADediting_1478922 | chr9_92078519_- | intronic |
| ADediting_1478923 | chr9_92078534_- | intronic |
| ADediting_1478924 | chr9_92078570_- | intronic |
| ADediting_1478925 | chr9_92078610_- | intronic |
| ADediting_1478926 | chr9_92078706_- | intronic |
| ADediting_1478927 | chr9_92078744_- | intronic |
| ADediting_1478928 | chr9_92079148_- | UTR3 |
| ADediting_1478929 | chr9_92079161_- | UTR3 |
| ADediting_1478930 | chr9_92079165_- | UTR3 |
| ADediting_1478931 | chr9_92079173_- | UTR3 |
| ADediting_1478932 | chr9_92079181_- | UTR3 |
| ADediting_1478933 | chr9_92079184_- | UTR3 |
| ADediting_1478934 | chr9_92079204_- | UTR3 |
| ADediting_1478935 | chr9_92079208_- | UTR3 |
| ADediting_1478936 | chr9_92079213_- | UTR3 |
| ADediting_1478937 | chr9_92079214_- | UTR3 |
| ADediting_1478938 | chr9_92079220_- | UTR3 |
| ADediting_1478939 | chr9_92079222_- | UTR3 |
| ADediting_1478940 | chr9_92079240_- | UTR3 |
| ADediting_1478941 | chr9_92079255_- | UTR3 |
| ADediting_1478942 | chr9_92079258_- | UTR3 |
| ADediting_1478943 | chr9_92079269_- | UTR3 |
| ADediting_1478944 | chr9_92079270_- | UTR3 |
| ADediting_1478945 | chr9_92079277_- | UTR3 |
| ADediting_1478946 | chr9_92079303_- | UTR3 |
| ADediting_1478947 | chr9_92079318_- | UTR3 |
| ADediting_1478948 | chr9_92079322_- | UTR3 |
| ADediting_1478949 | chr9_92079326_- | UTR3 |
| ADediting_1478950 | chr9_92079332_- | UTR3 |
| ADediting_1478951 | chr9_92079333_- | UTR3 |
| ADediting_1478952 | chr9_92079348_- | UTR3 |
| ADediting_1478953 | chr9_92079349_- | UTR3 |
| ADediting_1478954 | chr9_92079367_- | UTR3 |
| ADediting_1478956 | chr9_92107588_- | intronic |
| ADediting_1478957 | chr9_92107628_- | intronic |
| ADediting_1594282 | chr9_92032624_- | intronic |
| ADediting_1594283 | chr9_92032695_- | intronic |
| ADediting_1594284 | chr9_92033677_- | intronic |
| ADediting_1594285 | chr9_92033740_- | intronic |
| ADediting_1594286 | chr9_92033742_- | intronic |
| ADediting_1594287 | chr9_92033801_- | intronic |
| ADediting_1594288 | chr9_92033827_- | intronic |
| ADediting_1594289 | chr9_92055164_- | intronic |
| ADediting_1594290 | chr9_92078597_- | intronic |
| ADediting_1594291 | chr9_92078721_- | intronic |
| ADediting_1594292 | chr9_92078728_- | intronic |
| ADediting_1594293 | chr9_92079197_- | UTR3 |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_1478853 | chr9_92032621_- | SINE | Alu | Name=AluY |
| ADediting_1478854 | chr9_92032633_- | SINE | Alu | Name=AluY |
| ADediting_1478855 | chr9_92032634_- | SINE | Alu | Name=AluY |
| ADediting_1478856 | chr9_92032651_- | SINE | Alu | Name=AluY |
| ADediting_1478857 | chr9_92032683_- | SINE | Alu | Name=AluY |
| ADediting_1478858 | chr9_92032687_- | SINE | Alu | Name=AluY |
| ADediting_1478859 | chr9_92032752_- | SINE | Alu | Name=AluY |
| ADediting_1478860 | chr9_92032754_- | SINE | Alu | Name=AluY |
| ADediting_1478861 | chr9_92032764_- | SINE | Alu | Name=AluY |
| ADediting_1478862 | chr9_92032767_- | SINE | Alu | Name=AluY |
| ADediting_1478863 | chr9_92032837_- | SINE | Alu | Name=AluY |
| ADediting_1478864 | chr9_92033618_- | SINE | Alu | Name=AluJb |
| ADediting_1478865 | chr9_92033628_- | SINE | Alu | Name=AluJb |
| ADediting_1478866 | chr9_92033640_- | SINE | Alu | Name=AluJb |
| ADediting_1478867 | chr9_92033684_- | SINE | Alu | Name=AluJb |
| ADediting_1478868 | chr9_92033688_- | SINE | Alu | Name=AluJb |
| ADediting_1478869 | chr9_92033720_- | SINE | Alu | Name=AluJb |
| ADediting_1478870 | chr9_92033741_- | SINE | Alu | Name=AluJb |
| ADediting_1478871 | chr9_92033750_- | SINE | Alu | Name=AluJb |
| ADediting_1478872 | chr9_92033760_- | SINE | Alu | Name=AluJb |
| ADediting_1478873 | chr9_92033763_- | SINE | Alu | Name=AluJb |
| ADediting_1478874 | chr9_92033765_- | SINE | Alu | Name=AluJb |
| ADediting_1478875 | chr9_92033766_- | SINE | Alu | Name=AluJb |
| ADediting_1478876 | chr9_92033768_- | SINE | Alu | Name=AluJb |
| ADediting_1478877 | chr9_92033771_- | SINE | Alu | Name=AluJb |
| ADediting_1478878 | chr9_92033774_- | SINE | Alu | Name=AluJb |
| ADediting_1478879 | chr9_92033789_- | SINE | Alu | Name=AluJb |
| ADediting_1478880 | chr9_92033810_- | SINE | Alu | Name=AluJb |
| ADediting_1478881 | chr9_92033812_- | SINE | Alu | Name=AluJb |
| ADediting_1478882 | chr9_92033818_- | SINE | Alu | Name=AluJb |
| ADediting_1478883 | chr9_92033825_- | SINE | Alu | Name=AluJb |
| ADediting_1478884 | chr9_92033841_- | SINE | Alu | Name=AluJb |
| ADediting_1478885 | chr9_92050889_- | SINE | Alu | Name=AluJb |
| ADediting_1478886 | chr9_92050910_- | SINE | Alu | Name=AluJb |
| ADediting_1478887 | chr9_92050915_- | SINE | Alu | Name=AluJb |
| ADediting_1478888 | chr9_92050924_- | SINE | Alu | Name=AluJb |
| ADediting_1478889 | chr9_92050957_- | SINE | Alu | Name=AluJb |
| ADediting_1478890 | chr9_92052805_- | SINE | Alu | Name=AluSz |
| ADediting_1478891 | chr9_92052813_- | SINE | Alu | Name=AluSz |
| ADediting_1478892 | chr9_92054037_- | SINE | Alu | Name=AluSp |
| ADediting_1478893 | chr9_92054071_- | SINE | Alu | Name=AluSp |
| ADediting_1478894 | chr9_92054156_- | SINE | Alu | Name=AluSp |
| ADediting_1478895 | chr9_92054268_- | SINE | Alu | Name=AluSp |
| ADediting_1478896 | chr9_92054669_- | SINE | Alu | Name=AluSc |
| ADediting_1478897 | chr9_92054670_- | SINE | Alu | Name=AluSc |
| ADediting_1478898 | chr9_92054733_- | SINE | Alu | Name=AluSc |
| ADediting_1478899 | chr9_92054813_- | SINE | Alu | Name=AluSc |
| ADediting_1478900 | chr9_92054827_- | SINE | Alu | Name=AluSc |
| ADediting_1478901 | chr9_92054830_- | SINE | Alu | Name=AluSc |
| ADediting_1478902 | chr9_92054831_- | SINE | Alu | Name=AluSc |
| ADediting_1478903 | chr9_92054855_- | SINE | Alu | Name=AluSc |
| ADediting_1478904 | chr9_92054865_- | SINE | Alu | Name=AluSc |
| ADediting_1478905 | chr9_92055169_- | SINE | Alu | Name=AluJo |
| ADediting_1478906 | chr9_92055174_- | SINE | Alu | Name=AluJo |
| ADediting_1478907 | chr9_92071115_- | SINE | Alu | Name=AluSp |
| ADediting_1478908 | chr9_92071124_- | SINE | Alu | Name=AluSp |
| ADediting_1478909 | chr9_92071133_- | SINE | Alu | Name=AluSp |
| ADediting_1478910 | chr9_92071224_- | SINE | Alu | Name=AluSp |
| ADediting_1478911 | chr9_92071227_- | SINE | Alu | Name=AluSp |
| ADediting_1478912 | chr9_92071272_- | SINE | Alu | Name=AluSp |
| ADediting_1478913 | chr9_92071276_- | SINE | Alu | Name=AluSp |
| ADediting_1478914 | chr9_92071278_- | SINE | Alu | Name=AluSp |
| ADediting_1478915 | chr9_92071300_- | SINE | Alu | Name=AluSp |
| ADediting_1478916 | chr9_92071337_- | SINE | Alu | Name=AluSp |
| ADediting_1478917 | chr9_92071353_- | SINE | Alu | Name=AluSp |
| ADediting_1478918 | chr9_92071361_- | SINE | Alu | Name=AluSp |
| ADediting_1478919 | chr9_92071373_- | SINE | Alu | Name=AluSp |
| ADediting_1478920 | chr9_92071387_- | SINE | Alu | Name=AluSp |
| ADediting_1478921 | chr9_92071397_- | SINE | Alu | Name=AluSp |
| ADediting_1478922 | chr9_92078519_- | SINE | Alu | Name=AluJb |
| ADediting_1478923 | chr9_92078534_- | SINE | Alu | Name=AluJb |
| ADediting_1478924 | chr9_92078570_- | SINE | Alu | Name=AluJb |
| ADediting_1478925 | chr9_92078610_- | SINE | Alu | Name=AluJb |
| ADediting_1478926 | chr9_92078706_- | SINE | Alu | Name=AluJb |
| ADediting_1478927 | chr9_92078744_- | SINE | Alu | Name=AluJb |
| ADediting_1478928 | chr9_92079148_- | SINE | Alu | Name=AluSx1 |
| ADediting_1478929 | chr9_92079161_- | SINE | Alu | Name=AluSx1 |
| ADediting_1478930 | chr9_92079165_- | SINE | Alu | Name=AluSx1 |
| ADediting_1478931 | chr9_92079173_- | SINE | Alu | Name=AluSx1 |
| ADediting_1478932 | chr9_92079181_- | SINE | Alu | Name=AluSx1 |
| ADediting_1478933 | chr9_92079184_- | SINE | Alu | Name=AluSx1 |
| ADediting_1478934 | chr9_92079204_- | SINE | Alu | Name=AluSx1 |
| ADediting_1478935 | chr9_92079208_- | SINE | Alu | Name=AluSx1 |
| ADediting_1478936 | chr9_92079213_- | SINE | Alu | Name=AluSx1 |
| ADediting_1478937 | chr9_92079214_- | SINE | Alu | Name=AluSx1 |
| ADediting_1478938 | chr9_92079220_- | SINE | Alu | Name=AluSx1 |
| ADediting_1478939 | chr9_92079222_- | SINE | Alu | Name=AluSx1 |
| ADediting_1478940 | chr9_92079240_- | SINE | Alu | Name=AluSx1 |
| ADediting_1478941 | chr9_92079255_- | SINE | Alu | Name=AluSx1 |
| ADediting_1478942 | chr9_92079258_- | SINE | Alu | Name=AluSx1 |
| ADediting_1478943 | chr9_92079269_- | SINE | Alu | Name=AluSx1 |
| ADediting_1478944 | chr9_92079270_- | SINE | Alu | Name=AluSx1 |
| ADediting_1478945 | chr9_92079277_- | SINE | Alu | Name=AluSx1 |
| ADediting_1478946 | chr9_92079303_- | SINE | Alu | Name=AluSx1 |
| ADediting_1478947 | chr9_92079318_- | SINE | Alu | Name=AluSx1 |
| ADediting_1478948 | chr9_92079322_- | SINE | Alu | Name=AluSx1 |
| ADediting_1478949 | chr9_92079326_- | SINE | Alu | Name=AluSx1 |
| ADediting_1478950 | chr9_92079332_- | SINE | Alu | Name=AluSx1 |
| ADediting_1478951 | chr9_92079333_- | SINE | Alu | Name=AluSx1 |
| ADediting_1478952 | chr9_92079348_- | SINE | Alu | Name=AluSx1 |
| ADediting_1478953 | chr9_92079349_- | SINE | Alu | Name=AluSx1 |
| ADediting_1478954 | chr9_92079367_- | SINE | Alu | Name=AluSx1 |
| ADediting_1478956 | chr9_92107588_- | SINE | Alu | Name=AluY |
| ADediting_1478957 | chr9_92107628_- | SINE | Alu | Name=AluY |
| ADediting_1594282 | chr9_92032624_- | SINE | Alu | Name=AluY |
| ADediting_1594283 | chr9_92032695_- | SINE | Alu | Name=AluY |
| ADediting_1594284 | chr9_92033677_- | SINE | Alu | Name=AluJb |
| ADediting_1594285 | chr9_92033740_- | SINE | Alu | Name=AluJb |
| ADediting_1594286 | chr9_92033742_- | SINE | Alu | Name=AluJb |
| ADediting_1594287 | chr9_92033801_- | SINE | Alu | Name=AluJb |
| ADediting_1594288 | chr9_92033827_- | SINE | Alu | Name=AluJb |
| ADediting_1594289 | chr9_92055164_- | SINE | Alu | Name=AluJo |
| ADediting_1594290 | chr9_92078597_- | SINE | Alu | Name=AluJb |
| ADediting_1594291 | chr9_92078721_- | SINE | Alu | Name=AluJb |
| ADediting_1594292 | chr9_92078728_- | SINE | Alu | Name=AluJb |
| ADediting_1594293 | chr9_92079197_- | SINE | Alu | Name=AluSx1 |
Top |
RNA A-to-I editing events in the alternative splicing sites for SPTLC1 |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| ES | ADediting_1478884 | chr9_92033841_- | 92033834:92033842 | 5ss | 2e | CAGGTGCAG | 4.95 | CGGGTGCAG | -0.19 |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
Top |
Differntial gene expression between RNA A-to-I edited versus non-edited samples for SPTLC1 |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
 | |
 | |
 | |
 | |
 | |
 | |
 | |
 | |
 | |
| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
 |
| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |