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| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for TOMM40 |
 Gene summary |
| Gene information | Gene symbol | TOMM40 | Gene ID | 10452 |
| Gene name | translocase of outer mitochondrial membrane 40 | |
| Synonyms | C19orf1|D19S1177E|PER-EC1|PEREC1|TOM40 | |
| Cytomap | 19q13.32 | |
| Type of gene | protein-coding | |
| Description | mitochondrial import receptor subunit TOM40 homologmitochondrial outer membrane proteinp38.5protein Haymakertranslocase of outer membrane 40 kDa subunit homologtranslocase of outer mitochondrial membrane 40 homolog | |
| Modification date | 20200313 | |
| UniProtAcc | O96008, | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
Top |
RNA A-to-I events for TOMM40 |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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| RNA editing frequencies across three data sets. |
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| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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| RNA A-to-I editing events in AD. |
| ADediting_759809(44891344, +), ADediting_759810(44895747, +), ADediting_759811(44896793, +), ADediting_759812(44896800, +), ADediting_759813(44896805, +), ADediting_759814(44896853, +), ADediting_759815(44896873, +), ADediting_759816(44897522, +), ADediting_759817(44897553, +), ADediting_759818(44897653, +), ADediting_759819(44897654, +), ADediting_759820(44897695, +), ADediting_759821(44897706, +), ADediting_759822(44897843, +), ADediting_759823(44897859, +), ADediting_759824(44897861, +), ADediting_759825(44897885, +), ADediting_759826(44897891, +), ADediting_759827(44898607, +), ADediting_759828(44898638, +), ADediting_759829(44898667, +), ADediting_759830(44898774, +), ADediting_759831(44898781, +), ADediting_759832(44898785, +), ADediting_759833(44898790, +), ADediting_759834(44898800, +), ADediting_759835(44898812, +), ADediting_759836(44898814, +), ADediting_759837(44898985, +), ADediting_759838(44899011, +), ADediting_759839(44901479, +), ADediting_759840(44901487, +), ADediting_759841(44901488, +), ADediting_759842(44901493, +), ADediting_759843(44901593, +), ADediting_759844(44901617, +), ADediting_759845(44901619, +), ADediting_759846(44901625, +), ADediting_759847(44901626, +), ADediting_759848(44901647, +), ADediting_759849(44901648, +), ADediting_759850(44901658, +), ADediting_759851(44901662, +), ADediting_759852(44901697, +), ADediting_759853(44901809, +), ADediting_759854(44901823, +), ADediting_759855(44901832, +), ADediting_759856(44901891, +), ADediting_759857(44901901, +), ADediting_759858(44901928, +), ADediting_759859(44901937, +), ADediting_759860(44901940, +), ADediting_759861(44901944, +), ADediting_759862(44901953, +), ADediting_759863(44901964, +), ADediting_759864(44901969, +), ADediting_759865(44902011, +), ADediting_759866(44902031, +), ADediting_759867(44902040, +), ADediting_759868(44902047, +), ADediting_759869(44902050, +), ADediting_759870(44902060, +), ADediting_759871(44902223, +), ADediting_759872(44902251, +), ADediting_759873(44902261, +), ADediting_759874(44902267, +), ADediting_759875(44902277, +), ADediting_759876(44902282, +), ADediting_759877(44902289, +), ADediting_759878(44902315, +), ADediting_759879(44902320, +), ADediting_759880(44902332, +), ADediting_759881(44902336, +), ADediting_759882(44902342, +), ADediting_759883(44902344, +), ADediting_759884(44902355, +), ADediting_759885(44902358, +), ADediting_759886(44902364, +), ADediting_759887(44902404, +), ADediting_759888(44902407, +), ADediting_759889(44902416, +), ADediting_759890(44902428, +), ADediting_759891(44902457, +), ADediting_759892(44902458, +), ADediting_759893(44902470, +), ADediting_759894(44902472, +), ADediting_759895(44902488, +), ADediting_759896(44902628, +), ADediting_1556586(44894666, +), ADediting_1556587(44897539, +), ADediting_1556588(44901557, +), ADediting_1556589(44901837, +), ADediting_1556590(44901872, +), ADediting_1556591(44901888, +), ADediting_1556592(44901936, +), ADediting_1556593(44902010, +), ADediting_1631506(44896854, +), |
Top |
RNA editing positional annotations for TOMM40 using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_759809 | chr19_44891344_+ | UTR5 |
| ADediting_759810 | chr19_44895747_+ | intronic |
| ADediting_759811 | chr19_44896793_+ | intronic |
| ADediting_759812 | chr19_44896800_+ | intronic |
| ADediting_759813 | chr19_44896805_+ | intronic |
| ADediting_759814 | chr19_44896853_+ | intronic |
| ADediting_759815 | chr19_44896873_+ | intronic |
| ADediting_759816 | chr19_44897522_+ | intronic |
| ADediting_759817 | chr19_44897553_+ | intronic |
| ADediting_759818 | chr19_44897653_+ | intronic |
| ADediting_759819 | chr19_44897654_+ | intronic |
| ADediting_759820 | chr19_44897695_+ | intronic |
| ADediting_759821 | chr19_44897706_+ | intronic |
| ADediting_759822 | chr19_44897843_+ | intronic |
| ADediting_759823 | chr19_44897859_+ | intronic |
| ADediting_759824 | chr19_44897861_+ | intronic |
| ADediting_759825 | chr19_44897885_+ | intronic |
| ADediting_759826 | chr19_44897891_+ | intronic |
| ADediting_759827 | chr19_44898607_+ | intronic |
| ADediting_759828 | chr19_44898638_+ | intronic |
| ADediting_759829 | chr19_44898667_+ | intronic |
| ADediting_759830 | chr19_44898774_+ | intronic |
| ADediting_759831 | chr19_44898781_+ | intronic |
| ADediting_759832 | chr19_44898785_+ | intronic |
| ADediting_759833 | chr19_44898790_+ | intronic |
| ADediting_759834 | chr19_44898800_+ | intronic |
| ADediting_759835 | chr19_44898812_+ | intronic |
| ADediting_759836 | chr19_44898814_+ | intronic |
| ADediting_759837 | chr19_44898985_+ | intronic |
| ADediting_759838 | chr19_44899011_+ | intronic |
| ADediting_759839 | chr19_44901479_+ | UTR3 |
| ADediting_759840 | chr19_44901487_+ | UTR3 |
| ADediting_759841 | chr19_44901488_+ | UTR3 |
| ADediting_759842 | chr19_44901493_+ | UTR3 |
| ADediting_759843 | chr19_44901593_+ | UTR3 |
| ADediting_759844 | chr19_44901617_+ | UTR3 |
| ADediting_759845 | chr19_44901619_+ | UTR3 |
| ADediting_759846 | chr19_44901625_+ | UTR3 |
| ADediting_759847 | chr19_44901626_+ | UTR3 |
| ADediting_759848 | chr19_44901647_+ | UTR3 |
| ADediting_759849 | chr19_44901648_+ | UTR3 |
| ADediting_759850 | chr19_44901658_+ | UTR3 |
| ADediting_759851 | chr19_44901662_+ | UTR3 |
| ADediting_759852 | chr19_44901697_+ | UTR3 |
| ADediting_759853 | chr19_44901809_+ | UTR3 |
| ADediting_759854 | chr19_44901823_+ | UTR3 |
| ADediting_759855 | chr19_44901832_+ | UTR3 |
| ADediting_759856 | chr19_44901891_+ | UTR3 |
| ADediting_759857 | chr19_44901901_+ | UTR3 |
| ADediting_759858 | chr19_44901928_+ | UTR3 |
| ADediting_759859 | chr19_44901937_+ | UTR3 |
| ADediting_759860 | chr19_44901940_+ | UTR3 |
| ADediting_759861 | chr19_44901944_+ | UTR3 |
| ADediting_759862 | chr19_44901953_+ | UTR3 |
| ADediting_759863 | chr19_44901964_+ | UTR3 |
| ADediting_759864 | chr19_44901969_+ | UTR3 |
| ADediting_759865 | chr19_44902011_+ | UTR3 |
| ADediting_759866 | chr19_44902031_+ | UTR3 |
| ADediting_759867 | chr19_44902040_+ | UTR3 |
| ADediting_759868 | chr19_44902047_+ | UTR3 |
| ADediting_759869 | chr19_44902050_+ | UTR3 |
| ADediting_759870 | chr19_44902060_+ | UTR3 |
| ADediting_759871 | chr19_44902223_+ | UTR3 |
| ADediting_759872 | chr19_44902251_+ | UTR3 |
| ADediting_759873 | chr19_44902261_+ | UTR3 |
| ADediting_759874 | chr19_44902267_+ | UTR3 |
| ADediting_759875 | chr19_44902277_+ | UTR3 |
| ADediting_759876 | chr19_44902282_+ | UTR3 |
| ADediting_759877 | chr19_44902289_+ | UTR3 |
| ADediting_759878 | chr19_44902315_+ | UTR3 |
| ADediting_759879 | chr19_44902320_+ | UTR3 |
| ADediting_759880 | chr19_44902332_+ | UTR3 |
| ADediting_759881 | chr19_44902336_+ | UTR3 |
| ADediting_759882 | chr19_44902342_+ | UTR3 |
| ADediting_759883 | chr19_44902344_+ | UTR3 |
| ADediting_759884 | chr19_44902355_+ | UTR3 |
| ADediting_759885 | chr19_44902358_+ | UTR3 |
| ADediting_759886 | chr19_44902364_+ | UTR3 |
| ADediting_759887 | chr19_44902404_+ | UTR3 |
| ADediting_759888 | chr19_44902407_+ | UTR3 |
| ADediting_759889 | chr19_44902416_+ | UTR3 |
| ADediting_759890 | chr19_44902428_+ | UTR3 |
| ADediting_759891 | chr19_44902457_+ | UTR3 |
| ADediting_759892 | chr19_44902458_+ | UTR3 |
| ADediting_759893 | chr19_44902470_+ | UTR3 |
| ADediting_759894 | chr19_44902472_+ | UTR3 |
| ADediting_759895 | chr19_44902488_+ | UTR3 |
| ADediting_759896 | chr19_44902628_+ | UTR3 |
| ADediting_1556586 | chr19_44894666_+ | intronic |
| ADediting_1556587 | chr19_44897539_+ | intronic |
| ADediting_1556588 | chr19_44901557_+ | UTR3 |
| ADediting_1556589 | chr19_44901837_+ | UTR3 |
| ADediting_1556590 | chr19_44901872_+ | UTR3 |
| ADediting_1556591 | chr19_44901888_+ | UTR3 |
| ADediting_1556592 | chr19_44901936_+ | UTR3 |
| ADediting_1556593 | chr19_44902010_+ | UTR3 |
| ADediting_1631506 | chr19_44896854_+ | intronic |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_759810 | chr19_44895747_+ | SINE | Alu | Name=AluSz |
| ADediting_759811 | chr19_44896793_+ | SINE | Alu | Name=AluJr |
| ADediting_759812 | chr19_44896800_+ | SINE | Alu | Name=AluJr |
| ADediting_759813 | chr19_44896805_+ | SINE | Alu | Name=AluJr |
| ADediting_759814 | chr19_44896853_+ | SINE | Alu | Name=AluJr |
| ADediting_759815 | chr19_44896873_+ | SINE | Alu | Name=AluJr |
| ADediting_759816 | chr19_44897522_+ | SINE | Alu | Name=AluSx |
| ADediting_759817 | chr19_44897553_+ | SINE | Alu | Name=AluSx |
| ADediting_759818 | chr19_44897653_+ | SINE | Alu | Name=AluSp |
| ADediting_759819 | chr19_44897654_+ | SINE | Alu | Name=AluSp |
| ADediting_759820 | chr19_44897695_+ | SINE | Alu | Name=AluSp |
| ADediting_759821 | chr19_44897706_+ | SINE | Alu | Name=AluSp |
| ADediting_759822 | chr19_44897843_+ | SINE | Alu | Name=AluJo |
| ADediting_759823 | chr19_44897859_+ | SINE | Alu | Name=AluJo |
| ADediting_759824 | chr19_44897861_+ | SINE | Alu | Name=AluJo |
| ADediting_759825 | chr19_44897885_+ | SINE | Alu | Name=AluJo |
| ADediting_759826 | chr19_44897891_+ | SINE | Alu | Name=AluJo |
| ADediting_759827 | chr19_44898607_+ | SINE | Alu | Name=AluSx |
| ADediting_759828 | chr19_44898638_+ | SINE | Alu | Name=AluSx |
| ADediting_759829 | chr19_44898667_+ | SINE | Alu | Name=AluSx |
| ADediting_759830 | chr19_44898774_+ | SINE | Alu | Name=AluSx |
| ADediting_759831 | chr19_44898781_+ | SINE | Alu | Name=AluSx |
| ADediting_759832 | chr19_44898785_+ | SINE | Alu | Name=AluSx |
| ADediting_759833 | chr19_44898790_+ | SINE | Alu | Name=AluSx |
| ADediting_759834 | chr19_44898800_+ | SINE | Alu | Name=AluSx |
| ADediting_759835 | chr19_44898812_+ | SINE | Alu | Name=AluSx |
| ADediting_759836 | chr19_44898814_+ | SINE | Alu | Name=AluSx |
| ADediting_759837 | chr19_44898985_+ | SINE | Alu | Name=AluYc3 |
| ADediting_759838 | chr19_44899011_+ | SINE | Alu | Name=AluYc3 |
| ADediting_759839 | chr19_44901479_+ | SINE | Alu | Name=AluY |
| ADediting_759840 | chr19_44901487_+ | SINE | Alu | Name=AluY |
| ADediting_759841 | chr19_44901488_+ | SINE | Alu | Name=AluY |
| ADediting_759842 | chr19_44901493_+ | SINE | Alu | Name=AluY |
| ADediting_759843 | chr19_44901593_+ | SINE | Alu | Name=AluY |
| ADediting_759844 | chr19_44901617_+ | SINE | Alu | Name=AluY |
| ADediting_759845 | chr19_44901619_+ | SINE | Alu | Name=AluY |
| ADediting_759846 | chr19_44901625_+ | SINE | Alu | Name=AluY |
| ADediting_759847 | chr19_44901626_+ | SINE | Alu | Name=AluY |
| ADediting_759848 | chr19_44901647_+ | SINE | Alu | Name=AluY |
| ADediting_759849 | chr19_44901648_+ | SINE | Alu | Name=AluY |
| ADediting_759850 | chr19_44901658_+ | SINE | Alu | Name=AluY |
| ADediting_759851 | chr19_44901662_+ | SINE | Alu | Name=AluY |
| ADediting_759852 | chr19_44901697_+ | SINE | Alu | Name=AluY |
| ADediting_759853 | chr19_44901809_+ | SINE | Alu | Name=AluSz |
| ADediting_759854 | chr19_44901823_+ | SINE | Alu | Name=AluSz |
| ADediting_759855 | chr19_44901832_+ | SINE | Alu | Name=AluSz |
| ADediting_759856 | chr19_44901891_+ | SINE | Alu | Name=AluSz |
| ADediting_759857 | chr19_44901901_+ | SINE | Alu | Name=AluSz |
| ADediting_759858 | chr19_44901928_+ | SINE | Alu | Name=AluSz |
| ADediting_759859 | chr19_44901937_+ | SINE | Alu | Name=AluSz |
| ADediting_759860 | chr19_44901940_+ | SINE | Alu | Name=AluSz |
| ADediting_759861 | chr19_44901944_+ | SINE | Alu | Name=AluSz |
| ADediting_759862 | chr19_44901953_+ | SINE | Alu | Name=AluSz |
| ADediting_759863 | chr19_44901964_+ | SINE | Alu | Name=AluSz |
| ADediting_759864 | chr19_44901969_+ | SINE | Alu | Name=AluSz |
| ADediting_759865 | chr19_44902011_+ | SINE | Alu | Name=AluSz |
| ADediting_759866 | chr19_44902031_+ | SINE | Alu | Name=AluSz |
| ADediting_759867 | chr19_44902040_+ | SINE | Alu | Name=AluSz |
| ADediting_759868 | chr19_44902047_+ | SINE | Alu | Name=AluSz |
| ADediting_759869 | chr19_44902050_+ | SINE | Alu | Name=AluSz |
| ADediting_759870 | chr19_44902060_+ | SINE | Alu | Name=AluSz |
| ADediting_759871 | chr19_44902223_+ | SINE | Alu | Name=AluJb |
| ADediting_759872 | chr19_44902251_+ | SINE | Alu | Name=AluJb |
| ADediting_759873 | chr19_44902261_+ | SINE | Alu | Name=AluJb |
| ADediting_759874 | chr19_44902267_+ | SINE | Alu | Name=AluJb |
| ADediting_759875 | chr19_44902277_+ | SINE | Alu | Name=AluJb |
| ADediting_759876 | chr19_44902282_+ | SINE | Alu | Name=AluJb |
| ADediting_759877 | chr19_44902289_+ | SINE | Alu | Name=AluJb |
| ADediting_759878 | chr19_44902315_+ | SINE | Alu | Name=AluJb |
| ADediting_759879 | chr19_44902320_+ | SINE | Alu | Name=AluJb |
| ADediting_759880 | chr19_44902332_+ | SINE | Alu | Name=AluJb |
| ADediting_759881 | chr19_44902336_+ | SINE | Alu | Name=AluJb |
| ADediting_759882 | chr19_44902342_+ | SINE | Alu | Name=AluJb |
| ADediting_759883 | chr19_44902344_+ | SINE | Alu | Name=AluJb |
| ADediting_759884 | chr19_44902355_+ | SINE | Alu | Name=AluJb |
| ADediting_759885 | chr19_44902358_+ | SINE | Alu | Name=AluJb |
| ADediting_759886 | chr19_44902364_+ | SINE | Alu | Name=AluJb |
| ADediting_759887 | chr19_44902404_+ | SINE | Alu | Name=AluJb |
| ADediting_759888 | chr19_44902407_+ | SINE | Alu | Name=AluJb |
| ADediting_759889 | chr19_44902416_+ | SINE | Alu | Name=AluJb |
| ADediting_759890 | chr19_44902428_+ | SINE | Alu | Name=AluJb |
| ADediting_759891 | chr19_44902457_+ | SINE | Alu | Name=AluJb |
| ADediting_759892 | chr19_44902458_+ | SINE | Alu | Name=AluJb |
| ADediting_759893 | chr19_44902470_+ | SINE | Alu | Name=AluJb |
| ADediting_759894 | chr19_44902472_+ | SINE | Alu | Name=AluJb |
| ADediting_759895 | chr19_44902488_+ | SINE | Alu | Name=AluJb |
| ADediting_1556586 | chr19_44894666_+ | SINE | Alu | Name=AluJr |
| ADediting_1556587 | chr19_44897539_+ | SINE | Alu | Name=AluSx |
| ADediting_1556588 | chr19_44901557_+ | SINE | Alu | Name=AluY |
| ADediting_1556589 | chr19_44901837_+ | SINE | Alu | Name=AluSz |
| ADediting_1556590 | chr19_44901872_+ | SINE | Alu | Name=AluSz |
| ADediting_1556591 | chr19_44901888_+ | SINE | Alu | Name=AluSz |
| ADediting_1556592 | chr19_44901936_+ | SINE | Alu | Name=AluSz |
| ADediting_1556593 | chr19_44902010_+ | SINE | Alu | Name=AluSz |
| ADediting_1631506 | chr19_44896854_+ | SINE | Alu | Name=AluJr |
Top |
RNA A-to-I editing events in the alternative splicing sites for TOMM40 |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
Top |
Differntial gene expression between RNA A-to-I edited versus non-edited samples for TOMM40 |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
Top |
Protein coding region RNA A-to-I editings for TOMM40 |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
Top |
The effects of the RNA editing to the miRNA binding sites for TOMM40 |
| RNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. |
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| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1556590 | chr19_44901872_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-5699-5p | chr19 | 44901868 | 44901874 | 7mer-m8 | 44901854 | 44901875 | 140 | -13.43 |
| ADediting_1556590 | chr19_44901872_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-874-5p | chr19 | 44901869 | 44901876 | 8mer-1a | 44901854 | 44901876 | 144 | -19.69 |
| ADediting_1556591 | chr19_44901888_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-3176 | chr19 | 44901885 | 44901891 | 7mer-m8 | 44901874 | 44901892 | 152 | -22.74 |
| ADediting_1556591 | chr19_44901888_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-3922-3p | chr19 | 44901885 | 44901891 | 7mer-m8 | 44901870 | 44901892 | 149 | -20.18 |
| ADediting_1556591 | chr19_44901888_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-6878-3p | chr19 | 44901884 | 44901890 | 7mer-m8 | 44901869 | 44901891 | 154 | -26.77 |
| ADediting_1556592 | chr19_44901936_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-6844 | chr19 | 44901930 | 44901936 | 7mer-m8 | 44901915 | 44901937 | 154 | -7.81 |
| ADediting_1556593 | chr19_44902010_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-9900 | chr19 | 44902008 | 44902014 | 7mer-m8 | 44901996 | 44902015 | 155 | -16.75 |
| ADediting_759839 | chr19_44901479_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-4634 | chr19 | 44901476 | 44901482 | 7mer-m8 | 44901460 | 44901483 | 151 | -32 |
| ADediting_759840 | chr19_44901487_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-513a-5p | chr19 | 44901481 | 44901487 | 7mer-m8 | 44901471 | 44901488 | 144 | -16.68 |
| ADediting_759840 | chr19_44901487_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-638 | chr19 | 44901486 | 44901492 | 7mer-1a | 44901468 | 44901492 | 159 | -35.56 |
| ADediting_759841 | chr19_44901488_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-8052 | chr19 | 44901486 | 44901492 | 7mer-1a | 44901474 | 44901492 | 140 | -24.15 |
| ADediting_759842 | chr19_44901493_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-371a-3p | chr19 | 44901491 | 44901497 | 7mer-m8 | 44901476 | 44901498 | 145 | -17.36 |
| ADediting_759844 | chr19_44901617_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-4269 | chr19 | 44901610 | 44901616 | 7mer-m8 | 44901597 | 44901617 | 152 | -22.06 |
| ADediting_759844 | chr19_44901617_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-6715b-5p | chr19 | 44901610 | 44901616 | 7mer-m8 | 44901597 | 44901617 | 140 | -17.24 |
| ADediting_759844 | chr19_44901617_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-7151-3p | chr19 | 44901612 | 44901618 | 7mer-m8 | 44901599 | 44901619 | 140 | -18.58 |
| ADediting_759845 | chr19_44901619_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-3619-3p | chr19 | 44901616 | 44901622 | 7mer-m8 | 44901601 | 44901623 | 148 | -23.61 |
| ADediting_759848 | chr19_44901647_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-629-3p | chr19 | 44901642 | 44901648 | 7mer-m8 | 44901628 | 44901649 | 153 | -27.3 |
| ADediting_759849 | chr19_44901648_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-141-5p | chr19 | 44901643 | 44901649 | 7mer-m8 | 44901628 | 44901650 | 151 | -22.59 |
| ADediting_759850 | chr19_44901658_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-10400-3p | chr19 | 44901655 | 44901661 | 7mer-m8 | 44901641 | 44901662 | 140 | -20.37 |
| ADediting_759850 | chr19_44901658_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-4437 | chr19 | 44901654 | 44901661 | 8mer-1a | 44901641 | 44901661 | 141 | -16.09 |
| ADediting_759850 | chr19_44901658_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-4674 | chr19 | 44901655 | 44901661 | 7mer-m8 | 44901642 | 44901662 | 142 | -22.11 |
| ADediting_759852 | chr19_44901697_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-3960 | chr19 | 44901694 | 44901701 | 8mer-1a | 44901681 | 44901701 | 147 | -30.03 |
| ADediting_759852 | chr19_44901697_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-8072 | chr19 | 44901694 | 44901701 | 8mer-1a | 44901682 | 44901701 | 146 | -24.78 |
| ADediting_759854 | chr19_44901823_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-4634 | chr19 | 44901820 | 44901826 | 7mer-m8 | 44901808 | 44901827 | 143 | -20.77 |
| ADediting_759855 | chr19_44901832_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-8052 | chr19 | 44901830 | 44901836 | 7mer-1a | 44901818 | 44901836 | 140 | -23.7 |
| ADediting_759857 | chr19_44901901_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-3190-5p | chr19 | 44901894 | 44901900 | 7mer-m8 | 44901882 | 44901901 | 154 | -23.32 |
| ADediting_759860 | chr19_44901940_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-3190-5p | chr19 | 44901938 | 44901944 | 7mer-m8 | 44901926 | 44901945 | 143 | -16.24 |
| ADediting_759860 | chr19_44901940_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-548s | chr19 | 44901937 | 44901943 | 7mer-m8 | 44901921 | 44901944 | 143 | -11.4 |
| ADediting_759861 | chr19_44901944_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-941 | chr19 | 44901940 | 44901946 | 7mer-m8 | 44901922 | 44901947 | 152 | -26.27 |
| ADediting_759863 | chr19_44901964_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-1184 | chr19 | 44901957 | 44901963 | 7mer-m8 | 44901943 | 44901964 | 145 | -17.74 |
| ADediting_759864 | chr19_44901969_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-140-3p | chr19 | 44901964 | 44901970 | 7mer-m8 | 44901950 | 44901971 | 151 | -21.18 |
| ADediting_759865 | chr19_44902011_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-3155a | chr19 | 44902008 | 44902014 | 7mer-m8 | 44901997 | 44902015 | 145 | -24.34 |
| ADediting_759865 | chr19_44902011_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-3155b | chr19 | 44902008 | 44902014 | 7mer-m8 | 44902000 | 44902015 | 145 | -23.45 |
| ADediting_759865 | chr19_44902011_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-484 | chr19 | 44902008 | 44902014 | 7mer-m8 | 44901994 | 44902015 | 146 | -17.3 |
| ADediting_759867 | chr19_44902040_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-5588-3p | chr19 | 44902037 | 44902043 | 7mer-m8 | 44902024 | 44902044 | 143 | -18.92 |
| ADediting_759869 | chr19_44902050_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-4746-3p | chr19 | 44902044 | 44902050 | 7mer-m8 | 44902031 | 44902051 | 140 | -21.57 |
| ADediting_759870 | chr19_44902060_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-4743-5p | chr19 | 44902056 | 44902062 | 7mer-m8 | 44902041 | 44902063 | 147 | -23.54 |
| ADediting_759871 | chr19_44902223_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-5588-3p | chr19 | 44902220 | 44902226 | 7mer-m8 | 44902209 | 44902227 | 144 | -11.92 |
| ADediting_759871 | chr19_44902223_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-9902 | chr19 | 44902216 | 44902222 | 7mer-m8 | 44902202 | 44902223 | 143 | -18.01 |
| ADediting_759872 | chr19_44902251_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-508-5p | chr19 | 44902248 | 44902254 | 7mer-m8 | 44902231 | 44902255 | 156 | -25.92 |
| ADediting_759872 | chr19_44902251_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-6512-3p | chr19 | 44902246 | 44902252 | 7mer-m8 | 44902232 | 44902253 | 140 | -20.03 |
| ADediting_759872 | chr19_44902251_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-6720-5p | chr19 | 44902246 | 44902252 | 7mer-m8 | 44902232 | 44902253 | 152 | -23.96 |
| ADediting_759872 | chr19_44902251_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-6849-3p | chr19 | 44902245 | 44902252 | 8mer-1a | 44902232 | 44902252 | 150 | -17.25 |
| ADediting_759872 | chr19_44902251_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-766-3p | chr19 | 44902247 | 44902253 | 7mer-m8 | 44902229 | 44902254 | 146 | -22.78 |
| ADediting_759876 | chr19_44902282_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-6089 | chr19 | 44902280 | 44902286 | 7mer-m8 | 44902264 | 44902287 | 169 | -38.46 |
| ADediting_759877 | chr19_44902289_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-25-5p | chr19 | 44902284 | 44902290 | 7mer-m8 | 44902271 | 44902291 | 147 | -24 |
| ADediting_759877 | chr19_44902289_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-658 | chr19 | 44902283 | 44902289 | 7mer-m8 | 44902262 | 44902290 | 160 | -32.47 |
| ADediting_759878 | chr19_44902315_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-6765-5p | chr19 | 44902313 | 44902319 | 7mer-m8 | 44902298 | 44902320 | 154 | -27.96 |
| ADediting_759881 | chr19_44902336_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-5690 | chr19 | 44902329 | 44902335 | 7mer-m8 | 44902316 | 44902336 | 145 | -17.72 |
| ADediting_759881 | chr19_44902336_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-7977 | chr19 | 44902332 | 44902338 | 7mer-m8 | 44902323 | 44902339 | 145 | -12.78 |
| ADediting_759884 | chr19_44902355_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-10400-5p | chr19 | 44902351 | 44902357 | 7mer-1a | 44902336 | 44902357 | 141 | -24.65 |
| ADediting_759884 | chr19_44902355_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-6770-3p | chr19 | 44902351 | 44902357 | 7mer-m8 | 44902337 | 44902358 | 150 | -23.37 |
| ADediting_759885 | chr19_44902358_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-1538 | chr19 | 44902355 | 44902361 | 7mer-m8 | 44902337 | 44902362 | 153 | -23.39 |
| ADediting_759885 | chr19_44902358_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-4745-3p | chr19 | 44902355 | 44902361 | 7mer-m8 | 44902341 | 44902362 | 153 | -23.09 |
| ADediting_759885 | chr19_44902358_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-4783-3p | chr19 | 44902353 | 44902359 | 7mer-m8 | 44902339 | 44902360 | 143 | -24.52 |
| ADediting_759886 | chr19_44902364_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-6749-5p | chr19 | 44902357 | 44902363 | 7mer-m8 | 44902343 | 44902364 | 152 | -27.71 |
| ADediting_759888 | chr19_44902407_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-433-5p | chr19 | 44902401 | 44902407 | 7mer-m8 | 44902387 | 44902408 | 157 | -22.41 |
| ADediting_759889 | chr19_44902416_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-3940-3p | chr19 | 44902413 | 44902419 | 7mer-m8 | 44902399 | 44902420 | 142 | -21.15 |
| ADediting_759890 | chr19_44902428_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-1289 | chr19 | 44902426 | 44902432 | 7mer-m8 | 44902412 | 44902433 | 154 | -21.53 |
| ADediting_759891 | chr19_44902457_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-3192-5p | chr19 | 44902450 | 44902457 | 8mer-1a | 44902435 | 44902457 | 152 | -24.69 |
| ADediting_759891 | chr19_44902457_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-326 | chr19 | 44902452 | 44902458 | 7mer-m8 | 44902440 | 44902459 | 140 | -14.81 |
| ADediting_759891 | chr19_44902457_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-330-5p | chr19 | 44902452 | 44902458 | 7mer-m8 | 44902435 | 44902459 | 146 | -23.03 |
| ADediting_759891 | chr19_44902457_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-4314 | chr19 | 44902451 | 44902457 | 7mer-m8 | 44902441 | 44902458 | 140 | -18.79 |
| ADediting_759891 | chr19_44902457_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-514a-5p | chr19 | 44902453 | 44902459 | 7mer-m8 | 44902440 | 44902460 | 154 | -19.31 |
| ADediting_759892 | chr19_44902458_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-3189-3p | chr19 | 44902452 | 44902458 | 7mer-m8 | 44902440 | 44902459 | 141 | -18.93 |
| ADediting_759892 | chr19_44902458_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-6813-3p | chr19 | 44902453 | 44902459 | 7mer-m8 | 44902440 | 44902460 | 140 | -12.52 |
| ADediting_759895 | chr19_44902488_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-1268a | chr19 | 44902484 | 44902491 | 8mer-1a | 44902474 | 44902491 | 161 | -26.72 |
| ADediting_759895 | chr19_44902488_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-1268b | chr19 | 44902484 | 44902491 | 8mer-1a | 44902472 | 44902491 | 161 | -26.72 |
| ADediting_759895 | chr19_44902488_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-4486 | chr19 | 44902486 | 44902492 | 7mer-m8 | 44902478 | 44902493 | 153 | -28.59 |
| ADediting_759896 | chr19_44902628_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-6757-3p | chr19 | 44902624 | 44902630 | 7mer-m8 | 44902610 | 44902631 | 154 | -16.68 |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1556589 | chr19_44901837_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-5089-5p | chr19 | 44901830 | 44901836 | 7mer-m8 | 44901812 | 44901837 | 145 | -16.95 |
| ADediting_1556589 | chr19_44901837_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-6506-5p | chr19 | 44901831 | 44901837 | 7mer-m8 | 44901816 | 44901838 | 144 | -13.31 |
| ADediting_1556590 | chr19_44901872_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-1297 | chr19 | 44901865 | 44901871 | 7mer-m8 | 44901857 | 44901872 | 146 | -11 |
| ADediting_1556590 | chr19_44901872_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-26a-5p | chr19 | 44901865 | 44901871 | 7mer-m8 | 44901848 | 44901872 | 151 | -18.2 |
| ADediting_1556590 | chr19_44901872_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-26b-5p | chr19 | 44901865 | 44901871 | 7mer-m8 | 44901853 | 44901872 | 146 | -12.14 |
| ADediting_1556590 | chr19_44901872_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-6878-3p | chr19 | 44901870 | 44901876 | 7mer-m8 | 44901855 | 44901877 | 153 | -24.51 |
| ADediting_1556591 | chr19_44901888_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-3663-5p | chr19 | 44901885 | 44901891 | 7mer-m8 | 44901873 | 44901892 | 144 | -23.05 |
| ADediting_1556591 | chr19_44901888_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-515-5p | chr19 | 44901881 | 44901887 | 7mer-m8 | 44901865 | 44901888 | 140 | -14.91 |
| ADediting_1556591 | chr19_44901888_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-519e-5p | chr19 | 44901881 | 44901887 | 7mer-m8 | 44901867 | 44901888 | 140 | -12.98 |
| ADediting_1556591 | chr19_44901888_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-6131 | chr19 | 44901886 | 44901892 | 7mer-m8 | 44901875 | 44901893 | 140 | -16.72 |
| ADediting_1556591 | chr19_44901888_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-6848-3p | chr19 | 44901884 | 44901890 | 7mer-m8 | 44901874 | 44901891 | 146 | -15.35 |
| ADediting_1556592 | chr19_44901936_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-4735-5p | chr19 | 44901934 | 44901940 | 7mer-m8 | 44901920 | 44901941 | 148 | -7.2 |
| ADediting_759839 | chr19_44901479_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-6807-5p | chr19 | 44901472 | 44901478 | 7mer-m8 | 44901458 | 44901479 | 145 | -24.67 |
| ADediting_759840 | chr19_44901487_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-10399-5p | chr19 | 44901482 | 44901488 | 7mer-m8 | 44901468 | 44901489 | 144 | -11.2 |
| ADediting_759840 | chr19_44901487_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-6504-3p | chr19 | 44901482 | 44901488 | 7mer-m8 | 44901468 | 44901489 | 148 | -14.35 |
| ADediting_759840 | chr19_44901487_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-7151-3p | chr19 | 44901480 | 44901487 | 8mer-1a | 44901467 | 44901487 | 144 | -16.51 |
| ADediting_759841 | chr19_44901488_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-10399-5p | chr19 | 44901482 | 44901488 | 7mer-m8 | 44901468 | 44901489 | 144 | -11.2 |
| ADediting_759841 | chr19_44901488_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-5089-5p | chr19 | 44901486 | 44901492 | 7mer-m8 | 44901471 | 44901493 | 148 | -14.13 |
| ADediting_759841 | chr19_44901488_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-6504-3p | chr19 | 44901482 | 44901488 | 7mer-m8 | 44901468 | 44901489 | 148 | -14.35 |
| ADediting_759842 | chr19_44901493_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-5089-5p | chr19 | 44901486 | 44901492 | 7mer-m8 | 44901471 | 44901493 | 148 | -14.13 |
| ADediting_759842 | chr19_44901493_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-512-3p | chr19 | 44901491 | 44901497 | 7mer-m8 | 44901477 | 44901498 | 149 | -15.51 |
| ADediting_759842 | chr19_44901493_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-6506-5p | chr19 | 44901487 | 44901493 | 7mer-m8 | 44901472 | 44901494 | 144 | -13.78 |
| ADediting_759843 | chr19_44901593_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-4735-5p | chr19 | 44901587 | 44901593 | 7mer-m8 | 44901573 | 44901594 | 140 | -4.47 |
| ADediting_759843 | chr19_44901593_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-4775 | chr19 | 44901586 | 44901592 | 7mer-m8 | 44901572 | 44901593 | 154 | -7.81 |
| ADediting_759844 | chr19_44901617_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-4423-3p | chr19 | 44901610 | 44901616 | 7mer-m8 | 44901596 | 44901617 | 154 | -23.03 |
| ADediting_759844 | chr19_44901617_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-625-3p | chr19 | 44901614 | 44901620 | 7mer-m8 | 44901599 | 44901621 | 146 | -16.85 |
| ADediting_759845 | chr19_44901619_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-625-3p | chr19 | 44901614 | 44901620 | 7mer-m8 | 44901599 | 44901621 | 146 | -16.85 |
| ADediting_759845 | chr19_44901619_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-8052 | chr19 | 44901618 | 44901624 | 7mer-1a | 44901604 | 44901624 | 141 | -22.7 |
| ADediting_759846 | chr19_44901625_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-3122 | chr19 | 44901619 | 44901625 | 7mer-m8 | 44901604 | 44901626 | 155 | -22.8 |
| ADediting_759846 | chr19_44901625_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-3913-5p | chr19 | 44901619 | 44901625 | 7mer-m8 | 44901605 | 44901626 | 146 | -16.51 |
| ADediting_759846 | chr19_44901625_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-4425 | chr19 | 44901620 | 44901626 | 7mer-m8 | 44901607 | 44901627 | 152 | -21.38 |
| ADediting_759846 | chr19_44901625_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-4703-3p | chr19 | 44901623 | 44901629 | 7mer-m8 | 44901608 | 44901630 | 150 | -14.67 |
| ADediting_759847 | chr19_44901626_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-3122 | chr19 | 44901619 | 44901625 | 7mer-m8 | 44901604 | 44901626 | 155 | -22.8 |
| ADediting_759847 | chr19_44901626_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-3913-5p | chr19 | 44901619 | 44901625 | 7mer-m8 | 44901605 | 44901626 | 146 | -16.51 |
| ADediting_759847 | chr19_44901626_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-4425 | chr19 | 44901620 | 44901626 | 7mer-m8 | 44901607 | 44901627 | 152 | -21.38 |
| ADediting_759847 | chr19_44901626_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-4703-3p | chr19 | 44901623 | 44901629 | 7mer-m8 | 44901608 | 44901630 | 150 | -14.67 |
| ADediting_759851 | chr19_44901662_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-1343-3p | chr19 | 44901658 | 44901664 | 7mer-m8 | 44901645 | 44901665 | 141 | -21.17 |
| ADediting_759851 | chr19_44901662_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-6742-3p | chr19 | 44901657 | 44901664 | 8mer-1a | 44901644 | 44901664 | 153 | -16.63 |
| ADediting_759851 | chr19_44901662_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-6783-3p | chr19 | 44901658 | 44901664 | 7mer-m8 | 44901644 | 44901665 | 152 | -19.39 |
| ADediting_759852 | chr19_44901697_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-891a-3p | chr19 | 44901691 | 44901697 | 7mer-m8 | 44901676 | 44901698 | 152 | -16.04 |
| ADediting_759853 | chr19_44901809_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-3064-5p | chr19 | 44901803 | 44901809 | 7mer-m8 | 44901790 | 44901810 | 149 | -21.25 |
| ADediting_759853 | chr19_44901809_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-3085-3p | chr19 | 44901803 | 44901809 | 7mer-m8 | 44901790 | 44901810 | 155 | -24.39 |
| ADediting_759853 | chr19_44901809_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-6504-5p | chr19 | 44901803 | 44901809 | 7mer-m8 | 44901790 | 44901810 | 150 | -20.49 |
| ADediting_759854 | chr19_44901823_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-937-5p | chr19 | 44901816 | 44901822 | 7mer-m8 | 44901802 | 44901823 | 145 | -25.8 |
| ADediting_759855 | chr19_44901832_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-10399-5p | chr19 | 44901826 | 44901832 | 7mer-m8 | 44901812 | 44901833 | 148 | -10.46 |
| ADediting_759855 | chr19_44901832_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-5089-5p | chr19 | 44901830 | 44901836 | 7mer-m8 | 44901812 | 44901837 | 145 | -16.95 |
| ADediting_759855 | chr19_44901832_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-6504-3p | chr19 | 44901826 | 44901832 | 7mer-m8 | 44901814 | 44901833 | 140 | -7.64 |
| ADediting_759856 | chr19_44901891_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-3663-5p | chr19 | 44901885 | 44901891 | 7mer-m8 | 44901873 | 44901892 | 144 | -23.05 |
| ADediting_759856 | chr19_44901891_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-6131 | chr19 | 44901886 | 44901892 | 7mer-m8 | 44901875 | 44901893 | 140 | -16.72 |
| ADediting_759856 | chr19_44901891_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-6848-3p | chr19 | 44901884 | 44901890 | 7mer-m8 | 44901874 | 44901891 | 146 | -15.35 |
| ADediting_759857 | chr19_44901901_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-1306-3p | chr19 | 44901896 | 44901902 | 7mer-m8 | 44901886 | 44901903 | 152 | -23.71 |
| ADediting_759859 | chr19_44901937_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-4735-5p | chr19 | 44901934 | 44901940 | 7mer-m8 | 44901920 | 44901941 | 148 | -7.2 |
| ADediting_759860 | chr19_44901940_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-4735-5p | chr19 | 44901934 | 44901940 | 7mer-m8 | 44901920 | 44901941 | 148 | -7.2 |
| ADediting_759860 | chr19_44901940_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-4794 | chr19 | 44901938 | 44901944 | 7mer-m8 | 44901924 | 44901945 | 140 | -14.58 |
| ADediting_759860 | chr19_44901940_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-664a-5p | chr19 | 44901938 | 44901944 | 7mer-m8 | 44901922 | 44901945 | 141 | -13.02 |
| ADediting_759861 | chr19_44901944_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-4794 | chr19 | 44901938 | 44901944 | 7mer-m8 | 44901924 | 44901945 | 140 | -14.58 |
| ADediting_759861 | chr19_44901944_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-664a-5p | chr19 | 44901938 | 44901944 | 7mer-m8 | 44901922 | 44901945 | 141 | -13.02 |
| ADediting_759861 | chr19_44901944_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-6765-3p | chr19 | 44901941 | 44901947 | 7mer-m8 | 44901928 | 44901948 | 152 | -20.77 |
| ADediting_759863 | chr19_44901964_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-582-5p | chr19 | 44901962 | 44901968 | 7mer-m8 | 44901949 | 44901969 | 154 | -18.88 |
| ADediting_759864 | chr19_44901969_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-582-5p | chr19 | 44901962 | 44901968 | 7mer-m8 | 44901949 | 44901969 | 154 | -18.88 |
| ADediting_759870 | chr19_44902060_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-3652 | chr19 | 44902056 | 44902062 | 7mer-m8 | 44902044 | 44902063 | 148 | -21.89 |
| ADediting_759872 | chr19_44902251_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-1251-5p | chr19 | 44902247 | 44902253 | 7mer-m8 | 44902231 | 44902254 | 146 | -20.43 |
| ADediting_759872 | chr19_44902251_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-1287-3p | chr19 | 44902246 | 44902252 | 7mer-m8 | 44902232 | 44902253 | 148 | -18.96 |
| ADediting_759876 | chr19_44902282_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-485-5p | chr19 | 44902280 | 44902286 | 7mer-m8 | 44902267 | 44902287 | 153 | -18.73 |
| ADediting_759876 | chr19_44902282_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-6884-5p | chr19 | 44902280 | 44902286 | 7mer-m8 | 44902264 | 44902287 | 146 | -24.41 |
| ADediting_759877 | chr19_44902289_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-12114 | chr19 | 44902285 | 44902291 | 7mer-m8 | 44902270 | 44902292 | 155 | -25.76 |
| ADediting_759877 | chr19_44902289_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-3689d | chr19 | 44902287 | 44902293 | 7mer-m8 | 44902272 | 44902294 | 143 | -18.69 |
| ADediting_759877 | chr19_44902289_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-4443 | chr19 | 44902282 | 44902288 | 7mer-m8 | 44902272 | 44902289 | 143 | -17.78 |
| ADediting_759877 | chr19_44902289_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-6851-5p | chr19 | 44902287 | 44902293 | 7mer-m8 | 44902268 | 44902294 | 149 | -29.31 |
| ADediting_759877 | chr19_44902289_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-7847-3p | chr19 | 44902283 | 44902289 | 7mer-m8 | 44902268 | 44902290 | 146 | -20.88 |
| ADediting_759878 | chr19_44902315_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-6134 | chr19 | 44902312 | 44902319 | 8mer-1a | 44902300 | 44902319 | 151 | -21.99 |
| ADediting_759879 | chr19_44902320_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-4478 | chr19 | 44902317 | 44902323 | 7mer-m8 | 44902308 | 44902324 | 155 | -24.8 |
| ADediting_759879 | chr19_44902320_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-485-5p | chr19 | 44902318 | 44902324 | 7mer-m8 | 44902306 | 44902325 | 147 | -16.49 |
| ADediting_759889 | chr19_44902416_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-5189-5p | chr19 | 44902410 | 44902416 | 7mer-m8 | 44902392 | 44902417 | 150 | -22.45 |
| ADediting_759889 | chr19_44902416_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-612 | chr19 | 44902410 | 44902416 | 7mer-m8 | 44902394 | 44902417 | 153 | -23.84 |
| ADediting_759889 | chr19_44902416_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-661 | chr19 | 44902412 | 44902418 | 7mer-m8 | 44902395 | 44902419 | 146 | -21.59 |
| ADediting_759889 | chr19_44902416_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-939-3p | chr19 | 44902411 | 44902417 | 7mer-m8 | 44902397 | 44902418 | 142 | -16.21 |
| ADediting_759891 | chr19_44902457_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-887-5p | chr19 | 44902450 | 44902457 | 8mer-1a | 44902435 | 44902457 | 149 | -15.71 |
| ADediting_759895 | chr19_44902488_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-4455 | chr19 | 44902484 | 44902491 | 8mer-1a | 44902476 | 44902491 | 149 | -17.26 |
| ADediting_759895 | chr19_44902488_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-6776-5p | chr19 | 44902486 | 44902492 | 7mer-m8 | 44902475 | 44902493 | 154 | -21.51 |
| ADediting_759896 | chr19_44902628_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-3122 | chr19 | 44902621 | 44902627 | 7mer-m8 | 44902608 | 44902628 | 149 | -18.13 |
| ADediting_759896 | chr19_44902628_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-3913-5p | chr19 | 44902621 | 44902627 | 7mer-m8 | 44902607 | 44902628 | 152 | -17.75 |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1391023 | chr8_140732605_- | ENSG00000130204.13 | ENST00000252487.9 | TOMM40-201 | hsa-miR-151a-3p | chr19 | 44903559 | 44903565 | 7mer-m8 | 44903546 | 44903566 | 145 | -16.05 |
| ADediting_1391023 | chr8_140732605_- | ENSG00000130204.13 | ENST00000405636.6 | TOMM40-202 | hsa-miR-151a-3p | chr19 | 44903559 | 44903565 | 7mer-m8 | 44903546 | 44903566 | 145 | -16.05 |
| ADediting_1391023 | chr8_140732605_- | ENSG00000130204.13 | ENST00000426677.7 | TOMM40-203 | hsa-miR-151a-3p | chr19 | 44903559 | 44903565 | 7mer-m8 | 44903546 | 44903566 | 145 | -16.05 |
| ADediting_1391023 | chr8_140732605_- | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-151a-3p | chr19 | 44903559 | 44903565 | 7mer-m8 | 44903546 | 44903566 | 145 | -16.05 |
| ADediting_291761 | chr11_93733708_- | ENSG00000130204.13 | ENST00000252487.9 | TOMM40-201 | hsa-miR-1304-3p | chr19 | 44903531 | 44903538 | 8mer-1a | 44903517 | 44903538 | 160 | -28.01 |
| ADediting_291761 | chr11_93733708_- | ENSG00000130204.13 | ENST00000405636.6 | TOMM40-202 | hsa-miR-1304-3p | chr19 | 44903531 | 44903538 | 8mer-1a | 44903517 | 44903538 | 160 | -28.01 |
| ADediting_291761 | chr11_93733708_- | ENSG00000130204.13 | ENST00000426677.7 | TOMM40-203 | hsa-miR-1304-3p | chr19 | 44903531 | 44903538 | 8mer-1a | 44903517 | 44903538 | 160 | -28.01 |
| ADediting_291761 | chr11_93733708_- | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-1304-3p | chr19 | 44903531 | 44903538 | 8mer-1a | 44903517 | 44903538 | 160 | -28.01 |
| ADediting_98289 | chr1_32086992_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-5585-3p | chr19 | 44902530 | 44902536 | 7mer-m8 | 44902516 | 44902537 | 148 | -16.77 |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_107020 | chr1_37500952_- | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-5581-3p | chr19 | 44902976 | 44902982 | 7mer-m8 | 44902962 | 44902983 | 140 | -18.94 |
| ADediting_291761 | chr11_93733708_- | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-1304-3p | chr19 | 44902741 | 44902748 | 8mer-1a | 44902728 | 44902748 | 154 | -22.51 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000130204.13 | ENST00000592434.5 | TOMM40-207 | hsa-miR-4775 | chr19 | 44901586 | 44901592 | 7mer-m8 | 44901572 | 44901593 | 154 | -7.81 |
| Differentially expressed gene-miRNA network |
Top |
The effects of the RNA editing to the stability of the RNA structures for TOMM40 |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| ENST00000592434.5 | protein_coding |  |  |
| ENST00000426677.7 | protein_coding |  |  |
| RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| ADediting_759839 | ENST00000592434.5 | chr19_44901479_+ | 1208 | -1600.70 | -1601.10 | -1663.90 |
| ADediting_759840 | ENST00000592434.5 | chr19_44901487_+ | 1216 | -1601.20 | -1601.10 | -1663.90 |
| ADediting_759841 | ENST00000592434.5 | chr19_44901488_+ | 1217 | -1601.10 | -1601.10 | -1663.90 |
| ADediting_759842 | ENST00000592434.5 | chr19_44901493_+ | 1222 | -1600.40 | -1601.10 | -1663.90 |
| ADediting_1556588 | ENST00000592434.5 | chr19_44901557_+ | 1286 | -1602.60 | -1601.10 | -1663.90 |
| ADediting_759843 | ENST00000592434.5 | chr19_44901593_+ | 1322 | -1600.80 | -1601.10 | -1663.90 |
| ADediting_759844 | ENST00000592434.5 | chr19_44901617_+ | 1346 | -1602.10 | -1601.10 | -1663.90 |
| ADediting_759845 | ENST00000592434.5 | chr19_44901619_+ | 1348 | -1606.00 | -1601.10 | -1663.90 |
| ADediting_759846 | ENST00000592434.5 | chr19_44901625_+ | 1354 | -1602.30 | -1601.10 | -1663.90 |
| ADediting_759847 | ENST00000592434.5 | chr19_44901626_+ | 1355 | -1602.50 | -1601.10 | -1663.90 |
| ADediting_759848 | ENST00000592434.5 | chr19_44901647_+ | 1376 | -1604.10 | -1601.10 | -1663.90 |
| ADediting_759849 | ENST00000592434.5 | chr19_44901648_+ | 1377 | -1602.90 | -1601.10 | -1663.90 |
| ADediting_759850 | ENST00000592434.5 | chr19_44901658_+ | 1387 | -1602.10 | -1601.10 | -1663.90 |
| ADediting_759851 | ENST00000592434.5 | chr19_44901662_+ | 1391 | -1600.40 | -1601.10 | -1663.90 |
| ADediting_759852 | ENST00000592434.5 | chr19_44901697_+ | 1426 | -1600.70 | -1601.10 | -1663.90 |
| ADediting_759853 | ENST00000592434.5 | chr19_44901809_+ | 1538 | -1600.40 | -1601.10 | -1663.90 |
| ADediting_759854 | ENST00000592434.5 | chr19_44901823_+ | 1552 | -1600.70 | -1601.10 | -1663.90 |
| ADediting_759855 | ENST00000592434.5 | chr19_44901832_+ | 1561 | -1601.10 | -1601.10 | -1663.90 |
| ADediting_1556589 | ENST00000592434.5 | chr19_44901837_+ | 1566 | -1600.30 | -1601.10 | -1663.90 |
| ADediting_1556590 | ENST00000592434.5 | chr19_44901872_+ | 1601 | -1603.00 | -1601.10 | -1663.90 |
| ADediting_1556591 | ENST00000592434.5 | chr19_44901888_+ | 1617 | -1600.50 | -1601.10 | -1663.90 |
| ADediting_759856 | ENST00000592434.5 | chr19_44901891_+ | 1620 | -1600.40 | -1601.10 | -1663.90 |
| ADediting_759857 | ENST00000592434.5 | chr19_44901901_+ | 1630 | -1601.10 | -1601.10 | -1663.90 |
| ADediting_759858 | ENST00000592434.5 | chr19_44901928_+ | 1657 | -1600.80 | -1601.10 | -1663.90 |
| ADediting_1556592 | ENST00000592434.5 | chr19_44901936_+ | 1665 | -1601.50 | -1601.10 | -1663.90 |
| ADediting_759859 | ENST00000592434.5 | chr19_44901937_+ | 1666 | -1601.40 | -1601.10 | -1663.90 |
| ADediting_759860 | ENST00000592434.5 | chr19_44901940_+ | 1669 | -1600.80 | -1601.10 | -1663.90 |
| ADediting_759861 | ENST00000592434.5 | chr19_44901944_+ | 1673 | -1605.00 | -1601.10 | -1663.90 |
| ADediting_759862 | ENST00000592434.5 | chr19_44901953_+ | 1682 | -1607.70 | -1601.10 | -1663.90 |
| ADediting_759863 | ENST00000592434.5 | chr19_44901964_+ | 1693 | -1601.70 | -1601.10 | -1663.90 |
| ADediting_759864 | ENST00000592434.5 | chr19_44901969_+ | 1698 | -1607.70 | -1601.10 | -1663.90 |
| ADediting_1556593 | ENST00000592434.5 | chr19_44902010_+ | 1739 | -1600.20 | -1601.10 | -1663.90 |
| ADediting_759865 | ENST00000592434.5 | chr19_44902011_+ | 1740 | -1607.80 | -1601.10 | -1663.90 |
| ADediting_759866 | ENST00000592434.5 | chr19_44902031_+ | 1760 | -1600.40 | -1601.10 | -1663.90 |
| ADediting_759867 | ENST00000592434.5 | chr19_44902040_+ | 1769 | -1601.80 | -1601.10 | -1663.90 |
| ADediting_759868 | ENST00000592434.5 | chr19_44902047_+ | 1776 | -1600.70 | -1601.10 | -1663.90 |
| ADediting_759869 | ENST00000592434.5 | chr19_44902050_+ | 1779 | -1605.00 | -1601.10 | -1663.90 |
| ADediting_759870 | ENST00000592434.5 | chr19_44902060_+ | 1789 | -1601.10 | -1601.10 | -1663.90 |
| ADediting_759871 | ENST00000592434.5 | chr19_44902223_+ | 1952 | -1601.70 | -1601.10 | -1663.90 |
| ADediting_759872 | ENST00000592434.5 | chr19_44902251_+ | 1980 | -1607.70 | -1601.10 | -1663.90 |
| ADediting_759873 | ENST00000592434.5 | chr19_44902261_+ | 1990 | -1605.80 | -1601.10 | -1663.90 |
| ADediting_759874 | ENST00000592434.5 | chr19_44902267_+ | 1996 | -1605.70 | -1601.10 | -1663.90 |
| ADediting_759875 | ENST00000592434.5 | chr19_44902277_+ | 2006 | -1603.80 | -1601.10 | -1663.90 |
| ADediting_759876 | ENST00000592434.5 | chr19_44902282_+ | 2011 | -1600.30 | -1601.10 | -1663.90 |
| ADediting_759877 | ENST00000592434.5 | chr19_44902289_+ | 2018 | -1606.50 | -1601.10 | -1663.90 |
| ADediting_759878 | ENST00000592434.5 | chr19_44902315_+ | 2044 | -1604.60 | -1601.10 | -1663.90 |
| ADediting_759879 | ENST00000592434.5 | chr19_44902320_+ | 2049 | -1600.40 | -1601.10 | -1663.90 |
| ADediting_759880 | ENST00000592434.5 | chr19_44902332_+ | 2061 | -1600.80 | -1601.10 | -1663.90 |
| ADediting_759881 | ENST00000592434.5 | chr19_44902336_+ | 2065 | -1605.10 | -1601.10 | -1663.90 |
| ADediting_759882 | ENST00000592434.5 | chr19_44902342_+ | 2071 | -1601.40 | -1601.10 | -1663.90 |
| ADediting_759883 | ENST00000592434.5 | chr19_44902344_+ | 2073 | -1600.40 | -1601.10 | -1663.90 |
| ADediting_759884 | ENST00000592434.5 | chr19_44902355_+ | 2084 | -1601.40 | -1601.10 | -1663.90 |
| ADediting_759885 | ENST00000592434.5 | chr19_44902358_+ | 2087 | -1600.40 | -1601.10 | -1663.90 |
| ADediting_759886 | ENST00000592434.5 | chr19_44902364_+ | 2093 | -1605.00 | -1601.10 | -1663.90 |
| ADediting_759887 | ENST00000592434.5 | chr19_44902404_+ | 2133 | -1600.70 | -1601.10 | -1663.90 |
| ADediting_759888 | ENST00000592434.5 | chr19_44902407_+ | 2136 | -1597.70 | -1601.10 | -1663.90 |
| ADediting_759889 | ENST00000592434.5 | chr19_44902416_+ | 2145 | -1600.40 | -1601.10 | -1663.90 |
| ADediting_759890 | ENST00000592434.5 | chr19_44902428_+ | 2157 | -1601.50 | -1601.10 | -1663.90 |
| ADediting_759891 | ENST00000592434.5 | chr19_44902457_+ | 2186 | -1601.20 | -1601.10 | -1663.90 |
| ADediting_759892 | ENST00000592434.5 | chr19_44902458_+ | 2187 | -1600.80 | -1601.10 | -1663.90 |
| ADediting_759893 | ENST00000592434.5 | chr19_44902470_+ | 2199 | -1598.10 | -1601.10 | -1663.90 |
| ADediting_759894 | ENST00000592434.5 | chr19_44902472_+ | 2201 | -1599.80 | -1601.10 | -1663.90 |
| ADediting_759895 | ENST00000592434.5 | chr19_44902488_+ | 2217 | -1600.70 | -1601.10 | -1663.90 |
| ADediting_759896 | ENST00000592434.5 | chr19_44902628_+ | 2357 | -1602.00 | -1601.10 | -1663.90 |
| ADediting_759809 | ENST00000426677.7 | chr19_44891344_+ | 91 | -771.00 | -770.50 | -771.00 |
| RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for TOMM40 |
| Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| CER | ADediting_1556588 | chr19_44901557_+ | 0.00251675280052339 | 0.244969007876226 | 6.31924395813487e-06 | 0.35930016525422 | 0.000264606675646461 | 0.293694009643481 |
| CER | ADediting_1556589 | chr19_44901837_+ | 0.192697866629606 | 0.106949420278979 | 0.000121012345627034 | 0.308746111514951 | 0.000985100727561773 | 0.266366165789771 |
| CER | ADediting_759839 | chr19_44901479_+ | 0.00022032137754293 | 0.297291961715317 | 4.16264291709687e-09 | 0.456937598885687 | 0.00155423529565764 | 0.256186323324294 |
| CER | ADediting_759840 | chr19_44901487_+ | 1.54273168656961e-05 | 0.344923082172374 | 4.1613013849847e-11 | 0.505539178499398 | 0.00129313115654427 | 0.260340343758636 |
| CER | ADediting_759841 | chr19_44901488_+ | 1.98620598446615e-06 | 0.376963386854684 | 1.93071498307779e-11 | 0.5129495143543 | 0.00488810733845384 | 0.228648558500935 |
| CER | ADediting_759844 | chr19_44901617_+ | 8.76483259428701e-06 | 0.354111444722558 | 2.77901737033821e-12 | 0.530895596975437 | 0.00138604329388788 | 0.258780989922366 |
| TCX | ADediting_759844 | chr19_44901617_+ | 0.922833022631435 | -0.00797564833735234 | 0.161093884036602 | -0.115006041424049 | 2.68739743348477e-06 | 0.372448747510334 |
| CER | ADediting_759845 | chr19_44901619_+ | 4.02578282989834e-05 | 0.328641855003876 | 5.2468201311375e-11 | 0.503266988752459 | 0.0138804181699419 | 0.200518970271435 |
| TCX | ADediting_759845 | chr19_44901619_+ | 0.939392299699139 | 0.00626043511398154 | 0.268772202144791 | -0.090869116046004 | 1.09751999028527e-05 | 0.350490980916474 |
| CER | ADediting_759846 | chr19_44901625_+ | 8.6414695755729e-05 | 0.314982953535031 | 3.17279601262229e-10 | 0.485034299950018 | 0.000460893334280669 | 0.282494512027332 |
| CER | ADediting_759847 | chr19_44901626_+ | 0.0135553830771636 | 0.201196839015909 | 1.74565616436743e-07 | 0.411017151262087 | 7.67707030618518e-05 | 0.31714235821948 |
| CER | ADediting_759850 | chr19_44901658_+ | 0.000807379575514728 | 0.270686235261085 | 4.66370629017157e-09 | 0.455636442392071 | 2.26329421325563e-06 | 0.375021656227681 |
| CER | ADediting_759851 | chr19_44901662_+ | 0.00133889565484109 | 0.259559924134639 | 3.63347594311868e-08 | 0.431143848204841 | 5.82936699106368e-05 | 0.322103953194013 |
| CER | ADediting_759852 | chr19_44901697_+ | 0.0516727602366796 | 0.159195004246573 | 5.71277910175539e-05 | 0.322464636177163 | 4.48334213104291e-06 | 0.364648178487303 |
| CER | ADediting_759854 | chr19_44901823_+ | 0.000431326259038127 | 0.283857200968483 | 1.66610976228015e-06 | 0.379556665311167 | 0.0138960254660021 | 0.200486771285834 |
| DLPFC | ADediting_759855 | chr19_44901832_+ | 3.22930397121284e-05 | 0.233748236194399 | 3.92082153176808e-08 | 0.305788686537484 | 0.00901050980957892 | 0.148111400373044 |
| CER | ADediting_759855 | chr19_44901832_+ | 0.00601978730322933 | 0.223296294841324 | 5.09152550385265e-06 | 0.362677284007742 | 0.00918163049934407 | 0.212064009494926 |
| CER | ADediting_759856 | chr19_44901891_+ | 0.000665124128153962 | 0.274828027222788 | 2.71547325114572e-09 | 0.461779749501114 | 3.27488719367622e-05 | 0.332224085665177 |
| CER | ADediting_759857 | chr19_44901901_+ | 0.00285512325949268 | 0.241949178753492 | 1.35373602584869e-06 | 0.382592059859718 | 0.0130460643221841 | 0.202288185125139 |
| CER | ADediting_759860 | chr19_44901940_+ | 1.56726496972636e-05 | 0.344662508921729 | 4.1560790852262e-07 | 0.399301087246375 | 0.0955704574845622 | 0.136591024490197 |
| CER | ADediting_759861 | chr19_44901944_+ | 0.0149608258007493 | 0.198361217498545 | 5.47744938743309e-05 | 0.323214186859877 | 0.00963554204793745 | 0.210745343004567 |
| CER | ADediting_759862 | chr19_44901953_+ | 0.00433713598937297 | 0.231669672042359 | 1.67981000449872e-05 | 0.343514412070048 | 0.0243062550733875 | 0.183863164831731 |
| TCX | ADediting_759862 | chr19_44901953_+ | 0.799737743620283 | -0.0208858785204603 | 0.13364403419599 | -0.12302860892423 | 2.87068088107996e-05 | 0.334487006477851 |
| CER | ADediting_759863 | chr19_44901964_+ | 0.000773348582012721 | 0.271612092944119 | 2.53666815130999e-06 | 0.373315903134553 | 0.00303885109983122 | 0.240442649611926 |
| TCX | ADediting_759863 | chr19_44901964_+ | 0.259433127388154 | 0.0926558069796912 | 0.699786857130512 | -0.0317423811383343 | 6.02806341700956e-05 | 0.321504555443099 |
| CER | ADediting_759864 | chr19_44901969_+ | 0.00138491508208405 | 0.258799344897701 | 1.28911510910348e-05 | 0.347873045379975 | 0.0343921158969864 | 0.172868839891807 |
| TCX | ADediting_759864 | chr19_44901969_+ | 0.975497585689596 | -0.00252894359429121 | 0.104832554004183 | -0.132948251302326 | 5.13350827043577e-05 | 0.324365876317054 |
| CER | ADediting_759865 | chr19_44902011_+ | 0.0354200747628429 | 0.171909268580584 | 2.60716199252334e-06 | 0.372904422236586 | 0.00608474746176252 | 0.223017184614064 |
| TCX | ADediting_759865 | chr19_44902011_+ | 0.98389411958157 | -0.0016621734740473 | 0.407756817352454 | -0.0680845512539478 | 0.00012777770594564 | 0.307725430909056 |
| CER | ADediting_759868 | chr19_44902047_+ | 0.0148718917311889 | 0.198533605586155 | 0.000125673942996891 | 0.308037310033685 | 6.7500196591366e-06 | 0.358261521599436 |
| CER | ADediting_759872 | chr19_44902251_+ | 9.7095495009095e-05 | 0.312840101553094 | 5.67734044724837e-09 | 0.45337202829947 | 0.0519370991303632 | 0.15901769744664 |
| CER | ADediting_759876 | chr19_44902282_+ | 0.00103015957591401 | 0.265385127018403 | 1.73366729139742e-07 | 0.41110846190778 | 0.000823024605941277 | 0.27027256400992 |
| TCX | ADediting_759876 | chr19_44902282_+ | 0.652933215021163 | 0.0370141755442379 | 0.414075862915434 | -0.0671732775088421 | 4.82815048415861e-06 | 0.363501786578046 |
| CER | ADediting_759877 | chr19_44902289_+ | 0.00487882305606307 | 0.228696880259011 | 9.48131899615189e-09 | 0.447388523729855 | 0.00722693499205377 | 0.218498661757326 |
| CER | ADediting_759878 | chr19_44902315_+ | 0.00224740279614255 | 0.247648266628021 | 2.59857600776224e-05 | 0.336186012413538 | 0.213984750166425 | 0.102053208990955 |
| CER | ADediting_759880 | chr19_44902332_+ | 0.000826292532991736 | 0.2701870690924 | 1.11634699245379e-11 | 0.518128885202159 | 1.61382963944646e-05 | 0.344178349142806 |
| CER | ADediting_759881 | chr19_44902336_+ | 0.00546058235816664 | 0.225816880155241 | 1.12872294699257e-06 | 0.385224853665852 | 0.0692760434437512 | 0.148744089363561 |
| TCX | ADediting_759881 | chr19_44902336_+ | 0.886136654498029 | -0.0117899962426461 | 0.103904177086849 | -0.133301664061419 | 8.34497036112747e-07 | 0.389549036086958 |
| CER | ADediting_759882 | chr19_44902342_+ | 0.116870493308431 | 0.128573971339512 | 0.000116010178423411 | 0.309535617542363 | 0.0419653336277513 | 0.166297268940296 |
| TCX | ADediting_759882 | chr19_44902342_+ | 0.393595925126353 | -0.0701575075491392 | 0.0425672837186927 | -0.165818931523504 | 2.40217735747858e-06 | 0.374132005445011 |
| CER | ADediting_759883 | chr19_44902344_+ | 4.16960327492469e-06 | 0.365766383527419 | 3.34762386636141e-08 | 0.432159401986678 | 0.00632312667116154 | 0.222015209459433 |
| TCX | ADediting_759884 | chr19_44902355_+ | 0.403479198231588 | -0.0687061636598392 | 0.0407656605519141 | -0.16726798869313 | 0.000139575597830227 | 0.306060448293918 |
| CER | ADediting_759886 | chr19_44902364_+ | 0.000357688701009508 | 0.287668062527922 | 3.93868435440209e-05 | 0.329023523124274 | 0.270494266995744 | 0.0905442994445386 |
| CER | ADediting_759887 | chr19_44902404_+ | 0.000352668343048194 | 0.287953645315208 | 1.50789620235197e-06 | 0.381019171599966 | 0.00173564590450795 | 0.253660301383746 |
| CER | ADediting_759889 | chr19_44902416_+ | 0.0145731938847379 | 0.199119253693237 | 5.50433828496945e-07 | 0.395407950757667 | 4.80405173973591e-05 | 0.325539060352483 |
| CER | ADediting_759890 | chr19_44902428_+ | 0.00100794783025018 | 0.26586370700901 | 6.45608978359189e-10 | 0.477530598632612 | 0.000250020156603156 | 0.294812926884241 |
| CER | ADediting_759892 | chr19_44902458_+ | 0.156929990558227 | 0.116152948260449 | 7.67074749154062e-06 | 0.356237166872878 | 0.104686412230108 | 0.133003720689297 |
| Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 2.23543947895212e-43 | 0.67979118227204 | 8.2855970445953e-56 | 0.743701807503184 | 1.84196124695953e-11 | 0.369466143449947 |
| AC | 1.57246546705267e-82 | 0.880892157268374 | 1.67601207719033e-64 | 0.828883434941813 | 6.18669023602073e-12 | 0.416955706282147 |
| PCC | 2.36579968059293e-50 | 0.832476816390248 | 1.91946262690968e-57 | 0.861182889234393 | 0.511588994019811 | 0.0477794434912179 |
| CER | 2.58967688139717e-11 | 0.510136973402204 | 1.18072272465236e-19 | 0.653835521704625 | 0.00171193915071307 | 0.253976348054992 |
| TCX | 9.61003314069291e-22 | 0.680628144154945 | 1.42668142801451e-21 | 0.67852995614386 | 0.426458467211129 | -0.0654108546570295 |
| FP | 1.1571579360974e-17 | 0.584041422994541 | 1.63346097423841e-19 | 0.609872760352715 | 0.0582152346216505 | 0.142246221854377 |
| IFG | 2.16238006193099e-06 | 0.794015896922076 | 0.000179635132226906 | 0.680859581326374 | 0.998821317061483 | -0.000311395457747314 |
| PG | 0.0628553175540707 | 0.136678063358721 | 1.34425645786245e-05 | 0.313204909870732 | 0.426859858592099 | -0.0586061628830386 |
| STG | 8.61940959044869e-22 | 0.822446819070755 | 2.58945560966426e-15 | 0.731922561649862 | 0.852381158486264 | 0.0206097732897501 |
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Relation with AD stages for TOMM40 |
| Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| CER | ADediting_759840 | chr19_44901487_+ | 7.83181921699997e-05 | 0.370719565026392 |
| CER | ADediting_759841 | chr19_44901488_+ | 0.000693578876327495 | 0.321438503323301 |
| CER | ADediting_759844 | chr19_44901617_+ | 2.41637491047088e-06 | 0.435877913487058 |
| CER | ADediting_759845 | chr19_44901619_+ | 9.18584480640089e-06 | 0.412446280296861 |
| CER | ADediting_759846 | chr19_44901625_+ | 9.89380497063874e-06 | 0.411090638820939 |
| CER | ADediting_759847 | chr19_44901626_+ | 0.00104863646680325 | 0.311099717869079 |
| CER | ADediting_759850 | chr19_44901658_+ | 5.13089704974087e-07 | 0.461043774093575 |
| CER | ADediting_759852 | chr19_44901697_+ | 2.23616075383441e-06 | 0.437185668435884 |
| CER | ADediting_759856 | chr19_44901891_+ | 6.8795568870326e-06 | 0.417669829416312 |
| CER | ADediting_759857 | chr19_44901901_+ | 2.83307130874967e-05 | 0.391219410458395 |
| CER | ADediting_759861 | chr19_44901944_+ | 0.000583417518149428 | 0.325658082254774 |
| CER | ADediting_759865 | chr19_44902011_+ | 0.00014033182636816 | 0.35831139550788 |
| CER | ADediting_759876 | chr19_44902282_+ | 0.000321367183667909 | 0.339760145245349 |
| CER | ADediting_759877 | chr19_44902289_+ | 0.00013571927507555 | 0.359036264555717 |
| CER | ADediting_759880 | chr19_44902332_+ | 1.1317575006481e-06 | 0.448447773105875 |
| CER | ADediting_759881 | chr19_44902336_+ | 1.87651139826896e-06 | 0.440124280003898 |
| CER | ADediting_759883 | chr19_44902344_+ | 0.00102457416149232 | 0.311690147395288 |
| CER | ADediting_759889 | chr19_44902416_+ | 0.000110471709110263 | 0.363462727840588 |
| CER | ADediting_759890 | chr19_44902428_+ | 2.1139185984664e-06 | 0.438130800041789 |
| CER | ADediting_1556589 | chr19_44901837_+ | 0.000521775173944047 | 0.328350476129497 |
| TCX | ADediting_759873 | chr19_44902261_+ | 0.000619959600151555 | 0.327127534911264 |
| TCX | ADediting_759877 | chr19_44902289_+ | 0.000356825726052176 | 0.340381626902896 |
| Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
| IFG | 0.0374004108172464 | -0.418378618929317 |
| PG | 1.49622632100575e-06 | -0.344288367101646 |
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RelatedDrugs for TOMM40 |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for TOMM40 |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
| TOMM40 | C0033975 | Psychotic Disorders | 1 | PSYGENET |
| TOMM40 | C0041696 | Unipolar Depression | 1 | PSYGENET |
| TOMM40 | C0152013 | Adenocarcinoma of lung (disorder) | 1 | CTD_human |
| TOMM40 | C0349204 | Nonorganic psychosis | 1 | PSYGENET |
| TOMM40 | C1269683 | Major Depressive Disorder | 1 | PSYGENET |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
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