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| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for C3orf86 |
 Gene summary |
| Gene information | Gene symbol | C3orf86 | Gene ID | 102724231 |
| Gene name | chromosome 3 open reading frame 86 | |
| Synonyms | LINC00694 | |
| Cytomap | 3p21.31 | |
| Type of gene | protein-coding | |
| Description | uncharacterized protein C3orf86long intergenic non-protein coding RNA 694 | |
| Modification date | 20200320 | |
| UniProtAcc | P0DN24, | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
Top |
RNA A-to-I events for C3orf86 |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA editing frequencies across three data sets. |
 |
| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA A-to-I editing events in AD. |
| ADediting_1064874(44430287, -), ADediting_1064875(44430298, -), ADediting_1064876(44430487, -), ADediting_1064877(44431461, -), ADediting_1064878(44431465, -), ADediting_1064879(44431985, -), ADediting_1064880(44432003, -), ADediting_1064881(44432016, -), ADediting_1064882(44432033, -), ADediting_1064883(44432101, -), ADediting_1064884(44432102, -), ADediting_1064885(44432144, -), ADediting_1064886(44432170, -), ADediting_1064887(44432171, -), ADediting_1064888(44433211, -), ADediting_1064889(44433225, -), ADediting_1064890(44433246, -), ADediting_1064891(44433251, -), ADediting_1064892(44433266, -), ADediting_1064893(44433275, -), ADediting_1064894(44433279, -), ADediting_1064895(44433282, -), ADediting_1064896(44433296, -), ADediting_1064897(44433316, -), ADediting_1064898(44433332, -), ADediting_1064899(44433335, -), ADediting_1064900(44433340, -), ADediting_1064901(44433345, -), ADediting_1064902(44433369, -), ADediting_1064903(44433370, -), ADediting_1064904(44433375, -), ADediting_1064905(44433376, -), ADediting_1064906(44433382, -), ADediting_1064907(44433384, -), ADediting_1064908(44433398, -), ADediting_1064909(44434156, -), ADediting_1064910(44434168, -), ADediting_1064911(44434169, -), ADediting_1064912(44434178, -), ADediting_1064913(44434183, -), ADediting_1064914(44434191, -), ADediting_1064915(44434195, -), ADediting_1064916(44434196, -), ADediting_1064917(44434208, -), ADediting_1064918(44434221, -), ADediting_1064919(44434225, -), ADediting_1064920(44434295, -), ADediting_1064921(44434297, -), ADediting_1064922(44434328, -), ADediting_1064923(44434348, -), ADediting_1064924(44434386, -), ADediting_1064925(44434393, -), ADediting_1064926(44434401, -), ADediting_1064927(44438188, -), ADediting_1064928(44438195, -), ADediting_1064929(44438212, -), ADediting_1064930(44438217, -), ADediting_1064931(44438220, -), ADediting_1064932(44438227, -), ADediting_1064933(44438242, -), ADediting_1064934(44438252, -), ADediting_1064935(44438256, -), ADediting_1064936(44438257, -), ADediting_1064937(44438262, -), ADediting_1064938(44438265, -), ADediting_1064939(44438271, -), ADediting_1064940(44438297, -), ADediting_1064941(44438298, -), ADediting_1064942(44438324, -), ADediting_1064943(44438327, -), ADediting_1064944(44438328, -), ADediting_1064945(44438329, -), ADediting_1064946(44438330, -), ADediting_1064947(44438333, -), ADediting_1064948(44438335, -), ADediting_1064949(44438336, -), ADediting_1064950(44438348, -), ADediting_1064951(44438353, -), ADediting_1064952(44438404, -), ADediting_1064953(44438435, -), ADediting_1064954(44438448, -), ADediting_1064955(44438461, -), ADediting_1064956(44438471, -), ADediting_1064957(44438491, -), ADediting_1064958(44438501, -), ADediting_1064959(44438524, -), ADediting_1064960(44438538, -), ADediting_1064961(44438546, -), ADediting_1064962(44438552, -), ADediting_1064963(44438568, -), ADediting_1064964(44438569, -), ADediting_1064965(44438575, -), ADediting_1064966(44438591, -), ADediting_1064967(44439054, -), ADediting_1064968(44439066, -), ADediting_1064969(44439067, -), ADediting_1064970(44439076, -), ADediting_1064971(44439085, -), ADediting_1064972(44439128, -), ADediting_1064973(44439138, -), ADediting_1064974(44439139, -), ADediting_1064975(44439153, -), ADediting_1064976(44439162, -), ADediting_1064977(44439166, -), ADediting_1064978(44439172, -), ADediting_1064979(44439175, -), ADediting_1064980(44439185, -), ADediting_1064981(44439186, -), ADediting_1064982(44439188, -), ADediting_1064983(44439210, -), ADediting_1064984(44439227, -), ADediting_1064985(44439228, -), ADediting_1064986(44439234, -), ADediting_1064987(44439242, -), ADediting_1064988(44439248, -), ADediting_1064989(44439249, -), ADediting_1064990(44439259, -), ADediting_1064991(44439267, -), ADediting_1064992(44439289, -), ADediting_1064993(44439304, -), ADediting_1064994(44439305, -), ADediting_1574275(44430281, -), ADediting_1574276(44430299, -), ADediting_1574277(44430326, -), ADediting_1574278(44430407, -), ADediting_1574279(44430456, -), ADediting_1574280(44430470, -), ADediting_1574281(44430471, -), ADediting_1574282(44430533, -), ADediting_1574283(44431288, -), ADediting_1574284(44432005, -), ADediting_1574285(44432148, -), ADediting_1574286(44432154, -), ADediting_1574287(44433219, -), ADediting_1574288(44433283, -), ADediting_1574289(44433333, -), ADediting_1574290(44433359, -), ADediting_1574291(44434329, -), ADediting_1574292(44434365, -), ADediting_1574293(44434405, -), ADediting_1574294(44438168, -), ADediting_1574295(44438207, -), ADediting_1574296(44438288, -), ADediting_1574297(44438331, -), ADediting_1574298(44438337, -), ADediting_1574299(44438338, -), ADediting_1574300(44438396, -), ADediting_1574301(44438464, -), ADediting_1574302(44438473, -), ADediting_1574303(44438474, -), ADediting_1574304(44438476, -), ADediting_1574305(44438493, -), ADediting_1574306(44439118, -), ADediting_1574307(44439145, -), ADediting_1574308(44439161, -), |
Top |
RNA editing positional annotations for C3orf86 using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_1064874 | chr3_44430287_- | ncRNA_intronic |
| ADediting_1064875 | chr3_44430298_- | ncRNA_intronic |
| ADediting_1064876 | chr3_44430487_- | ncRNA_intronic |
| ADediting_1064877 | chr3_44431461_- | ncRNA_intronic |
| ADediting_1064878 | chr3_44431465_- | ncRNA_intronic |
| ADediting_1064879 | chr3_44431985_- | ncRNA_intronic |
| ADediting_1064880 | chr3_44432003_- | ncRNA_intronic |
| ADediting_1064881 | chr3_44432016_- | ncRNA_intronic |
| ADediting_1064882 | chr3_44432033_- | ncRNA_intronic |
| ADediting_1064883 | chr3_44432101_- | ncRNA_intronic |
| ADediting_1064884 | chr3_44432102_- | ncRNA_intronic |
| ADediting_1064885 | chr3_44432144_- | ncRNA_intronic |
| ADediting_1064886 | chr3_44432170_- | ncRNA_intronic |
| ADediting_1064887 | chr3_44432171_- | ncRNA_intronic |
| ADediting_1064888 | chr3_44433211_- | ncRNA_intronic |
| ADediting_1064889 | chr3_44433225_- | ncRNA_intronic |
| ADediting_1064890 | chr3_44433246_- | ncRNA_intronic |
| ADediting_1064891 | chr3_44433251_- | ncRNA_intronic |
| ADediting_1064892 | chr3_44433266_- | ncRNA_intronic |
| ADediting_1064893 | chr3_44433275_- | ncRNA_intronic |
| ADediting_1064894 | chr3_44433279_- | ncRNA_intronic |
| ADediting_1064895 | chr3_44433282_- | ncRNA_intronic |
| ADediting_1064896 | chr3_44433296_- | ncRNA_intronic |
| ADediting_1064897 | chr3_44433316_- | ncRNA_intronic |
| ADediting_1064898 | chr3_44433332_- | ncRNA_intronic |
| ADediting_1064899 | chr3_44433335_- | ncRNA_intronic |
| ADediting_1064900 | chr3_44433340_- | ncRNA_intronic |
| ADediting_1064901 | chr3_44433345_- | ncRNA_intronic |
| ADediting_1064902 | chr3_44433369_- | ncRNA_intronic |
| ADediting_1064903 | chr3_44433370_- | ncRNA_intronic |
| ADediting_1064904 | chr3_44433375_- | ncRNA_intronic |
| ADediting_1064905 | chr3_44433376_- | ncRNA_intronic |
| ADediting_1064906 | chr3_44433382_- | ncRNA_intronic |
| ADediting_1064907 | chr3_44433384_- | ncRNA_intronic |
| ADediting_1064908 | chr3_44433398_- | ncRNA_intronic |
| ADediting_1064909 | chr3_44434156_- | ncRNA_intronic |
| ADediting_1064910 | chr3_44434168_- | ncRNA_intronic |
| ADediting_1064911 | chr3_44434169_- | ncRNA_intronic |
| ADediting_1064912 | chr3_44434178_- | ncRNA_intronic |
| ADediting_1064913 | chr3_44434183_- | ncRNA_intronic |
| ADediting_1064914 | chr3_44434191_- | ncRNA_intronic |
| ADediting_1064915 | chr3_44434195_- | ncRNA_intronic |
| ADediting_1064916 | chr3_44434196_- | ncRNA_intronic |
| ADediting_1064917 | chr3_44434208_- | ncRNA_intronic |
| ADediting_1064918 | chr3_44434221_- | ncRNA_intronic |
| ADediting_1064919 | chr3_44434225_- | ncRNA_intronic |
| ADediting_1064920 | chr3_44434295_- | ncRNA_intronic |
| ADediting_1064921 | chr3_44434297_- | ncRNA_intronic |
| ADediting_1064922 | chr3_44434328_- | ncRNA_intronic |
| ADediting_1064923 | chr3_44434348_- | ncRNA_intronic |
| ADediting_1064924 | chr3_44434386_- | ncRNA_intronic |
| ADediting_1064925 | chr3_44434393_- | ncRNA_intronic |
| ADediting_1064926 | chr3_44434401_- | ncRNA_intronic |
| ADediting_1064927 | chr3_44438188_- | ncRNA_intronic |
| ADediting_1064928 | chr3_44438195_- | ncRNA_intronic |
| ADediting_1064929 | chr3_44438212_- | ncRNA_intronic |
| ADediting_1064930 | chr3_44438217_- | ncRNA_intronic |
| ADediting_1064931 | chr3_44438220_- | ncRNA_intronic |
| ADediting_1064932 | chr3_44438227_- | ncRNA_intronic |
| ADediting_1064933 | chr3_44438242_- | ncRNA_intronic |
| ADediting_1064934 | chr3_44438252_- | ncRNA_intronic |
| ADediting_1064935 | chr3_44438256_- | ncRNA_intronic |
| ADediting_1064936 | chr3_44438257_- | ncRNA_intronic |
| ADediting_1064937 | chr3_44438262_- | ncRNA_intronic |
| ADediting_1064938 | chr3_44438265_- | ncRNA_intronic |
| ADediting_1064939 | chr3_44438271_- | ncRNA_intronic |
| ADediting_1064940 | chr3_44438297_- | ncRNA_intronic |
| ADediting_1064941 | chr3_44438298_- | ncRNA_intronic |
| ADediting_1064942 | chr3_44438324_- | ncRNA_intronic |
| ADediting_1064943 | chr3_44438327_- | ncRNA_intronic |
| ADediting_1064944 | chr3_44438328_- | ncRNA_intronic |
| ADediting_1064945 | chr3_44438329_- | ncRNA_intronic |
| ADediting_1064946 | chr3_44438330_- | ncRNA_intronic |
| ADediting_1064947 | chr3_44438333_- | ncRNA_intronic |
| ADediting_1064948 | chr3_44438335_- | ncRNA_intronic |
| ADediting_1064949 | chr3_44438336_- | ncRNA_intronic |
| ADediting_1064950 | chr3_44438348_- | ncRNA_intronic |
| ADediting_1064951 | chr3_44438353_- | ncRNA_intronic |
| ADediting_1064952 | chr3_44438404_- | ncRNA_intronic |
| ADediting_1064953 | chr3_44438435_- | ncRNA_intronic |
| ADediting_1064954 | chr3_44438448_- | ncRNA_intronic |
| ADediting_1064955 | chr3_44438461_- | ncRNA_intronic |
| ADediting_1064956 | chr3_44438471_- | ncRNA_intronic |
| ADediting_1064957 | chr3_44438491_- | ncRNA_intronic |
| ADediting_1064958 | chr3_44438501_- | ncRNA_intronic |
| ADediting_1064959 | chr3_44438524_- | ncRNA_intronic |
| ADediting_1064960 | chr3_44438538_- | ncRNA_intronic |
| ADediting_1064961 | chr3_44438546_- | ncRNA_intronic |
| ADediting_1064962 | chr3_44438552_- | ncRNA_intronic |
| ADediting_1064963 | chr3_44438568_- | ncRNA_intronic |
| ADediting_1064964 | chr3_44438569_- | ncRNA_intronic |
| ADediting_1064965 | chr3_44438575_- | ncRNA_intronic |
| ADediting_1064966 | chr3_44438591_- | ncRNA_intronic |
| ADediting_1064967 | chr3_44439054_- | ncRNA_intronic |
| ADediting_1064968 | chr3_44439066_- | ncRNA_intronic |
| ADediting_1064969 | chr3_44439067_- | ncRNA_intronic |
| ADediting_1064970 | chr3_44439076_- | ncRNA_intronic |
| ADediting_1064971 | chr3_44439085_- | ncRNA_intronic |
| ADediting_1064972 | chr3_44439128_- | ncRNA_intronic |
| ADediting_1064973 | chr3_44439138_- | ncRNA_intronic |
| ADediting_1064974 | chr3_44439139_- | ncRNA_intronic |
| ADediting_1064975 | chr3_44439153_- | ncRNA_intronic |
| ADediting_1064976 | chr3_44439162_- | ncRNA_intronic |
| ADediting_1064977 | chr3_44439166_- | ncRNA_intronic |
| ADediting_1064978 | chr3_44439172_- | ncRNA_intronic |
| ADediting_1064979 | chr3_44439175_- | ncRNA_intronic |
| ADediting_1064980 | chr3_44439185_- | ncRNA_intronic |
| ADediting_1064981 | chr3_44439186_- | ncRNA_intronic |
| ADediting_1064982 | chr3_44439188_- | ncRNA_intronic |
| ADediting_1064983 | chr3_44439210_- | ncRNA_intronic |
| ADediting_1064984 | chr3_44439227_- | ncRNA_intronic |
| ADediting_1064985 | chr3_44439228_- | ncRNA_intronic |
| ADediting_1064986 | chr3_44439234_- | ncRNA_intronic |
| ADediting_1064987 | chr3_44439242_- | ncRNA_intronic |
| ADediting_1064988 | chr3_44439248_- | ncRNA_intronic |
| ADediting_1064989 | chr3_44439249_- | ncRNA_intronic |
| ADediting_1064990 | chr3_44439259_- | ncRNA_intronic |
| ADediting_1064991 | chr3_44439267_- | ncRNA_intronic |
| ADediting_1064992 | chr3_44439289_- | ncRNA_intronic |
| ADediting_1064993 | chr3_44439304_- | ncRNA_intronic |
| ADediting_1064994 | chr3_44439305_- | ncRNA_intronic |
| ADediting_1574275 | chr3_44430281_- | ncRNA_intronic |
| ADediting_1574276 | chr3_44430299_- | ncRNA_intronic |
| ADediting_1574277 | chr3_44430326_- | ncRNA_intronic |
| ADediting_1574278 | chr3_44430407_- | ncRNA_intronic |
| ADediting_1574279 | chr3_44430456_- | ncRNA_intronic |
| ADediting_1574280 | chr3_44430470_- | ncRNA_intronic |
| ADediting_1574281 | chr3_44430471_- | ncRNA_intronic |
| ADediting_1574282 | chr3_44430533_- | ncRNA_intronic |
| ADediting_1574283 | chr3_44431288_- | ncRNA_intronic |
| ADediting_1574284 | chr3_44432005_- | ncRNA_intronic |
| ADediting_1574285 | chr3_44432148_- | ncRNA_intronic |
| ADediting_1574286 | chr3_44432154_- | ncRNA_intronic |
| ADediting_1574287 | chr3_44433219_- | ncRNA_intronic |
| ADediting_1574288 | chr3_44433283_- | ncRNA_intronic |
| ADediting_1574289 | chr3_44433333_- | ncRNA_intronic |
| ADediting_1574290 | chr3_44433359_- | ncRNA_intronic |
| ADediting_1574291 | chr3_44434329_- | ncRNA_intronic |
| ADediting_1574292 | chr3_44434365_- | ncRNA_intronic |
| ADediting_1574293 | chr3_44434405_- | ncRNA_intronic |
| ADediting_1574294 | chr3_44438168_- | ncRNA_intronic |
| ADediting_1574295 | chr3_44438207_- | ncRNA_intronic |
| ADediting_1574296 | chr3_44438288_- | ncRNA_intronic |
| ADediting_1574297 | chr3_44438331_- | ncRNA_intronic |
| ADediting_1574298 | chr3_44438337_- | ncRNA_intronic |
| ADediting_1574299 | chr3_44438338_- | ncRNA_intronic |
| ADediting_1574300 | chr3_44438396_- | ncRNA_intronic |
| ADediting_1574301 | chr3_44438464_- | ncRNA_intronic |
| ADediting_1574302 | chr3_44438473_- | ncRNA_intronic |
| ADediting_1574303 | chr3_44438474_- | ncRNA_intronic |
| ADediting_1574304 | chr3_44438476_- | ncRNA_intronic |
| ADediting_1574305 | chr3_44438493_- | ncRNA_intronic |
| ADediting_1574306 | chr3_44439118_- | ncRNA_intronic |
| ADediting_1574307 | chr3_44439145_- | ncRNA_intronic |
| ADediting_1574308 | chr3_44439161_- | ncRNA_intronic |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_1064874 | chr3_44430287_- | SINE | Alu | Name=AluJr |
| ADediting_1064875 | chr3_44430298_- | SINE | Alu | Name=AluJr |
| ADediting_1064876 | chr3_44430487_- | SINE | Alu | Name=AluJr |
| ADediting_1064877 | chr3_44431461_- | SINE | Alu | Name=AluSx |
| ADediting_1064878 | chr3_44431465_- | SINE | Alu | Name=AluSx |
| ADediting_1064879 | chr3_44431985_- | SINE | Alu | Name=AluSz |
| ADediting_1064880 | chr3_44432003_- | SINE | Alu | Name=AluSz |
| ADediting_1064881 | chr3_44432016_- | SINE | Alu | Name=AluSz |
| ADediting_1064882 | chr3_44432033_- | SINE | Alu | Name=AluSz |
| ADediting_1064883 | chr3_44432101_- | SINE | Alu | Name=AluSz |
| ADediting_1064884 | chr3_44432102_- | SINE | Alu | Name=AluSz |
| ADediting_1064885 | chr3_44432144_- | SINE | Alu | Name=AluSz |
| ADediting_1064886 | chr3_44432170_- | SINE | Alu | Name=AluSz |
| ADediting_1064887 | chr3_44432171_- | SINE | Alu | Name=AluSz |
| ADediting_1064888 | chr3_44433211_- | SINE | Alu | Name=AluSx1 |
| ADediting_1064889 | chr3_44433225_- | SINE | Alu | Name=AluSx1 |
| ADediting_1064890 | chr3_44433246_- | SINE | Alu | Name=AluSx1 |
| ADediting_1064891 | chr3_44433251_- | SINE | Alu | Name=AluSx1 |
| ADediting_1064892 | chr3_44433266_- | SINE | Alu | Name=AluSx1 |
| ADediting_1064893 | chr3_44433275_- | SINE | Alu | Name=AluSx1 |
| ADediting_1064894 | chr3_44433279_- | SINE | Alu | Name=AluSx1 |
| ADediting_1064895 | chr3_44433282_- | SINE | Alu | Name=AluSx1 |
| ADediting_1064896 | chr3_44433296_- | SINE | Alu | Name=AluSx1 |
| ADediting_1064897 | chr3_44433316_- | SINE | Alu | Name=AluSx1 |
| ADediting_1064898 | chr3_44433332_- | SINE | Alu | Name=AluSx1 |
| ADediting_1064899 | chr3_44433335_- | SINE | Alu | Name=AluSx1 |
| ADediting_1064900 | chr3_44433340_- | SINE | Alu | Name=AluSx1 |
| ADediting_1064901 | chr3_44433345_- | SINE | Alu | Name=AluSx1 |
| ADediting_1064902 | chr3_44433369_- | SINE | Alu | Name=AluSx1 |
| ADediting_1064903 | chr3_44433370_- | SINE | Alu | Name=AluSx1 |
| ADediting_1064904 | chr3_44433375_- | SINE | Alu | Name=AluSx1 |
| ADediting_1064905 | chr3_44433376_- | SINE | Alu | Name=AluSx1 |
| ADediting_1064906 | chr3_44433382_- | SINE | Alu | Name=AluSx1 |
| ADediting_1064907 | chr3_44433384_- | SINE | Alu | Name=AluSx1 |
| ADediting_1064908 | chr3_44433398_- | SINE | Alu | Name=AluSx1 |
| ADediting_1064909 | chr3_44434156_- | SINE | Alu | Name=AluSz |
| ADediting_1064910 | chr3_44434168_- | SINE | Alu | Name=AluSz |
| ADediting_1064911 | chr3_44434169_- | SINE | Alu | Name=AluSz |
| ADediting_1064912 | chr3_44434178_- | SINE | Alu | Name=AluSz |
| ADediting_1064913 | chr3_44434183_- | SINE | Alu | Name=AluSz |
| ADediting_1064914 | chr3_44434191_- | SINE | Alu | Name=AluSz |
| ADediting_1064915 | chr3_44434195_- | SINE | Alu | Name=AluSz |
| ADediting_1064916 | chr3_44434196_- | SINE | Alu | Name=AluSz |
| ADediting_1064917 | chr3_44434208_- | SINE | Alu | Name=AluSz |
| ADediting_1064918 | chr3_44434221_- | SINE | Alu | Name=AluSz |
| ADediting_1064919 | chr3_44434225_- | SINE | Alu | Name=AluSz |
| ADediting_1064920 | chr3_44434295_- | SINE | Alu | Name=AluSz |
| ADediting_1064921 | chr3_44434297_- | SINE | Alu | Name=AluSz |
| ADediting_1064922 | chr3_44434328_- | SINE | Alu | Name=AluSz |
| ADediting_1064923 | chr3_44434348_- | SINE | Alu | Name=AluSz |
| ADediting_1064924 | chr3_44434386_- | SINE | Alu | Name=AluSz |
| ADediting_1064925 | chr3_44434393_- | SINE | Alu | Name=AluSz |
| ADediting_1064926 | chr3_44434401_- | SINE | Alu | Name=AluSz |
| ADediting_1064927 | chr3_44438188_- | SINE | Alu | Name=AluSg |
| ADediting_1064928 | chr3_44438195_- | SINE | Alu | Name=AluSg |
| ADediting_1064929 | chr3_44438212_- | SINE | Alu | Name=AluSg |
| ADediting_1064930 | chr3_44438217_- | SINE | Alu | Name=AluSg |
| ADediting_1064931 | chr3_44438220_- | SINE | Alu | Name=AluSg |
| ADediting_1064932 | chr3_44438227_- | SINE | Alu | Name=AluSg |
| ADediting_1064933 | chr3_44438242_- | SINE | Alu | Name=AluSg |
| ADediting_1064934 | chr3_44438252_- | SINE | Alu | Name=AluSg |
| ADediting_1064935 | chr3_44438256_- | SINE | Alu | Name=AluSg |
| ADediting_1064936 | chr3_44438257_- | SINE | Alu | Name=AluSg |
| ADediting_1064937 | chr3_44438262_- | SINE | Alu | Name=AluSg |
| ADediting_1064938 | chr3_44438265_- | SINE | Alu | Name=AluSg |
| ADediting_1064939 | chr3_44438271_- | SINE | Alu | Name=AluSg |
| ADediting_1064940 | chr3_44438297_- | SINE | Alu | Name=AluSg |
| ADediting_1064941 | chr3_44438298_- | SINE | Alu | Name=AluSg |
| ADediting_1064942 | chr3_44438324_- | SINE | Alu | Name=AluSg |
| ADediting_1064943 | chr3_44438327_- | SINE | Alu | Name=AluSg |
| ADediting_1064944 | chr3_44438328_- | SINE | Alu | Name=AluSg |
| ADediting_1064945 | chr3_44438329_- | SINE | Alu | Name=AluSg |
| ADediting_1064946 | chr3_44438330_- | SINE | Alu | Name=AluSg |
| ADediting_1064947 | chr3_44438333_- | SINE | Alu | Name=AluSg |
| ADediting_1064948 | chr3_44438335_- | SINE | Alu | Name=AluSg |
| ADediting_1064949 | chr3_44438336_- | SINE | Alu | Name=AluSg |
| ADediting_1064950 | chr3_44438348_- | SINE | Alu | Name=AluSg |
| ADediting_1064951 | chr3_44438353_- | SINE | Alu | Name=AluSg |
| ADediting_1064952 | chr3_44438404_- | SINE | Alu | Name=AluSg |
| ADediting_1064953 | chr3_44438435_- | SINE | Alu | Name=AluSg |
| ADediting_1064954 | chr3_44438448_- | SINE | Alu | Name=AluSg |
| ADediting_1064955 | chr3_44438461_- | SINE | Alu | Name=AluY |
| ADediting_1064956 | chr3_44438471_- | SINE | Alu | Name=AluY |
| ADediting_1064957 | chr3_44438491_- | SINE | Alu | Name=AluY |
| ADediting_1064958 | chr3_44438501_- | SINE | Alu | Name=AluY |
| ADediting_1064959 | chr3_44438524_- | SINE | Alu | Name=AluY |
| ADediting_1064960 | chr3_44438538_- | SINE | Alu | Name=AluY |
| ADediting_1064961 | chr3_44438546_- | SINE | Alu | Name=AluY |
| ADediting_1064962 | chr3_44438552_- | SINE | Alu | Name=AluY |
| ADediting_1064963 | chr3_44438568_- | SINE | Alu | Name=AluY |
| ADediting_1064964 | chr3_44438569_- | SINE | Alu | Name=AluY |
| ADediting_1064965 | chr3_44438575_- | SINE | Alu | Name=AluY |
| ADediting_1064966 | chr3_44438591_- | SINE | Alu | Name=AluY |
| ADediting_1064967 | chr3_44439054_- | SINE | Alu | Name=AluSz |
| ADediting_1064968 | chr3_44439066_- | SINE | Alu | Name=AluSz |
| ADediting_1064969 | chr3_44439067_- | SINE | Alu | Name=AluSz |
| ADediting_1064970 | chr3_44439076_- | SINE | Alu | Name=AluSz |
| ADediting_1064971 | chr3_44439085_- | SINE | Alu | Name=AluSz |
| ADediting_1064972 | chr3_44439128_- | SINE | Alu | Name=AluSz |
| ADediting_1064973 | chr3_44439138_- | SINE | Alu | Name=AluSz |
| ADediting_1064974 | chr3_44439139_- | SINE | Alu | Name=AluSz |
| ADediting_1064975 | chr3_44439153_- | SINE | Alu | Name=AluSz |
| ADediting_1064976 | chr3_44439162_- | SINE | Alu | Name=AluSz |
| ADediting_1064977 | chr3_44439166_- | SINE | Alu | Name=AluSz |
| ADediting_1064978 | chr3_44439172_- | SINE | Alu | Name=AluSz |
| ADediting_1064979 | chr3_44439175_- | SINE | Alu | Name=AluSz |
| ADediting_1064980 | chr3_44439185_- | SINE | Alu | Name=AluSz |
| ADediting_1064981 | chr3_44439186_- | SINE | Alu | Name=AluSz |
| ADediting_1064982 | chr3_44439188_- | SINE | Alu | Name=AluSz |
| ADediting_1064983 | chr3_44439210_- | SINE | Alu | Name=AluSz |
| ADediting_1064984 | chr3_44439227_- | SINE | Alu | Name=AluSz |
| ADediting_1064985 | chr3_44439228_- | SINE | Alu | Name=AluSz |
| ADediting_1064986 | chr3_44439234_- | SINE | Alu | Name=AluSz |
| ADediting_1064987 | chr3_44439242_- | SINE | Alu | Name=AluSz |
| ADediting_1064988 | chr3_44439248_- | SINE | Alu | Name=AluSz |
| ADediting_1064989 | chr3_44439249_- | SINE | Alu | Name=AluSz |
| ADediting_1064990 | chr3_44439259_- | SINE | Alu | Name=AluSz |
| ADediting_1064991 | chr3_44439267_- | SINE | Alu | Name=AluSz |
| ADediting_1064992 | chr3_44439289_- | SINE | Alu | Name=AluSz |
| ADediting_1064993 | chr3_44439304_- | SINE | Alu | Name=AluSz |
| ADediting_1064994 | chr3_44439305_- | SINE | Alu | Name=AluSz |
| ADediting_1574275 | chr3_44430281_- | SINE | Alu | Name=AluJr |
| ADediting_1574276 | chr3_44430299_- | SINE | Alu | Name=AluJr |
| ADediting_1574277 | chr3_44430326_- | SINE | Alu | Name=AluJr |
| ADediting_1574278 | chr3_44430407_- | SINE | Alu | Name=AluJr |
| ADediting_1574279 | chr3_44430456_- | SINE | Alu | Name=AluJr |
| ADediting_1574280 | chr3_44430470_- | SINE | Alu | Name=AluJr |
| ADediting_1574281 | chr3_44430471_- | SINE | Alu | Name=AluJr |
| ADediting_1574282 | chr3_44430533_- | SINE | Alu | Name=AluJr |
| ADediting_1574283 | chr3_44431288_- | SINE | Alu | Name=AluSx |
| ADediting_1574284 | chr3_44432005_- | SINE | Alu | Name=AluSz |
| ADediting_1574285 | chr3_44432148_- | SINE | Alu | Name=AluSz |
| ADediting_1574286 | chr3_44432154_- | SINE | Alu | Name=AluSz |
| ADediting_1574287 | chr3_44433219_- | SINE | Alu | Name=AluSx1 |
| ADediting_1574288 | chr3_44433283_- | SINE | Alu | Name=AluSx1 |
| ADediting_1574289 | chr3_44433333_- | SINE | Alu | Name=AluSx1 |
| ADediting_1574290 | chr3_44433359_- | SINE | Alu | Name=AluSx1 |
| ADediting_1574291 | chr3_44434329_- | SINE | Alu | Name=AluSz |
| ADediting_1574292 | chr3_44434365_- | SINE | Alu | Name=AluSz |
| ADediting_1574293 | chr3_44434405_- | SINE | Alu | Name=AluSz |
| ADediting_1574294 | chr3_44438168_- | SINE | Alu | Name=AluSg |
| ADediting_1574295 | chr3_44438207_- | SINE | Alu | Name=AluSg |
| ADediting_1574296 | chr3_44438288_- | SINE | Alu | Name=AluSg |
| ADediting_1574297 | chr3_44438331_- | SINE | Alu | Name=AluSg |
| ADediting_1574298 | chr3_44438337_- | SINE | Alu | Name=AluSg |
| ADediting_1574299 | chr3_44438338_- | SINE | Alu | Name=AluSg |
| ADediting_1574300 | chr3_44438396_- | SINE | Alu | Name=AluSg |
| ADediting_1574301 | chr3_44438464_- | SINE | Alu | Name=AluY |
| ADediting_1574302 | chr3_44438473_- | SINE | Alu | Name=AluY |
| ADediting_1574303 | chr3_44438474_- | SINE | Alu | Name=AluY |
| ADediting_1574304 | chr3_44438476_- | SINE | Alu | Name=AluY |
| ADediting_1574305 | chr3_44438493_- | SINE | Alu | Name=AluY |
| ADediting_1574306 | chr3_44439118_- | SINE | Alu | Name=AluSz |
| ADediting_1574307 | chr3_44439145_- | SINE | Alu | Name=AluSz |
| ADediting_1574308 | chr3_44439161_- | SINE | Alu | Name=AluSz |
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RNA A-to-I editing events in the alternative splicing sites for C3orf86 |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for C3orf86 |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
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Protein coding region RNA A-to-I editings for C3orf86 |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
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The effects of the RNA editing to the miRNA binding sites for C3orf86 |
| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| Differentially expressed gene-miRNA network |
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The effects of the RNA editing to the stability of the RNA structures for C3orf86 |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for C3orf86 |
| Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| AC | 1.00834001236391e-07 | 0.329021147114534 | 0.000284644457411947 | 0.227631498838735 | 1.19283374899819e-09 | 0.372542282445432 |
| STG | 0.90900843628375 | 0.0126591748411336 | 0.123064105268615 | -0.169570090701821 | 0.0029872186215483 | 0.320173746401824 |
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Relation with AD stages for C3orf86 |
| Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
| TCX | 0.000232501967040645 | 0.350269008276665 |
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RelatedDrugs for C3orf86 |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for C3orf86 |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
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