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| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for SCAMP2 |
 Gene summary |
| Gene information | Gene symbol | SCAMP2 | Gene ID | 10066 |
| Gene name | secretory carrier membrane protein 2 | |
| Synonyms | - | |
| Cytomap | 15q24.1 | |
| Type of gene | protein-coding | |
| Description | secretory carrier-associated membrane protein 2testis secretory sperm-binding protein Li 219p | |
| Modification date | 20200313 | |
| UniProtAcc | O15127, | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
| SCAMP2 | GO:0015031 | protein transport | 15840657 |
Top |
RNA A-to-I events for SCAMP2 |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA editing frequencies across three data sets. |
 |
| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA A-to-I editing events in AD. |
| ADediting_500659(74845923, -), ADediting_500660(74845940, -), ADediting_500661(74845941, -), ADediting_500662(74845994, -), ADediting_500663(74846039, -), ADediting_500664(74846065, -), ADediting_500665(74846066, -), ADediting_500666(74846080, -), ADediting_500667(74846091, -), ADediting_500668(74846110, -), ADediting_500669(74846119, -), ADediting_500670(74846170, -), ADediting_500671(74846182, -), ADediting_500672(74846199, -), ADediting_500673(74846200, -), ADediting_500674(74846206, -), ADediting_500675(74846220, -), ADediting_500676(74846238, -), ADediting_500677(74846243, -), ADediting_500678(74846246, -), ADediting_500679(74846345, -), ADediting_500680(74846350, -), ADediting_500681(74846362, -), ADediting_500682(74846394, -), ADediting_500683(74846507, -), ADediting_500684(74846519, -), ADediting_500685(74846520, -), ADediting_500686(74846574, -), ADediting_500687(74846582, -), ADediting_500688(74846594, -), ADediting_500689(74846596, -), ADediting_500690(74846599, -), ADediting_500691(74846652, -), ADediting_500692(74846653, -), ADediting_500693(74846665, -), ADediting_500694(74846678, -), ADediting_500695(74846689, -), ADediting_500696(74846702, -), ADediting_500697(74846718, -), ADediting_500698(74847122, -), ADediting_500699(74847125, -), ADediting_500700(74847152, -), ADediting_500701(74847154, -), ADediting_500702(74847164, -), ADediting_500703(74847188, -), ADediting_500704(74847189, -), ADediting_500705(74847197, -), ADediting_500706(74847200, -), ADediting_500707(74847201, -), ADediting_500708(74847203, -), ADediting_500709(74847207, -), ADediting_500710(74847220, -), ADediting_500711(74847224, -), ADediting_500712(74847229, -), ADediting_500713(74847230, -), ADediting_500714(74847232, -), ADediting_500715(74847272, -), ADediting_500716(74847283, -), ADediting_500717(74847286, -), ADediting_500718(74847293, -), ADediting_500719(74847306, -), ADediting_500720(74847308, -), ADediting_500721(74847344, -), ADediting_500722(74847345, -), ADediting_500723(74847350, -), ADediting_500724(74847366, -), ADediting_500725(74847367, -), ADediting_500726(74847404, -), ADediting_500727(74848001, -), ADediting_500728(74848136, -), ADediting_500729(74848160, -), ADediting_500730(74848165, -), ADediting_500731(74848170, -), ADediting_500732(74848179, -), ADediting_500733(74848182, -), ADediting_500734(74848183, -), ADediting_500735(74848196, -), ADediting_500736(74848206, -), ADediting_500737(74848208, -), ADediting_500738(74848232, -), ADediting_500739(74848235, -), ADediting_500740(74848236, -), ADediting_500741(74848244, -), ADediting_500742(74848247, -), ADediting_500743(74848251, -), ADediting_500744(74848264, -), ADediting_500745(74848265, -), ADediting_500746(74848268, -), ADediting_500747(74848270, -), ADediting_500748(74848272, -), ADediting_500749(74848277, -), ADediting_500750(74848300, -), ADediting_500751(74848301, -), ADediting_500752(74848310, -), ADediting_500753(74848335, -), ADediting_500754(74848341, -), ADediting_500755(74855196, -), ADediting_500756(74855307, -), ADediting_500757(74855374, -), ADediting_500758(74855375, -), ADediting_500759(74855500, -), ADediting_500760(74855604, -), ADediting_500761(74855616, -), ADediting_500762(74855633, -), ADediting_500763(74855669, -), ADediting_500764(74855670, -), ADediting_500765(74855672, -), ADediting_500766(74855677, -), ADediting_500767(74856337, -), ADediting_500768(74856367, -), ADediting_500769(74856372, -), ADediting_500770(74856378, -), ADediting_500771(74856412, -), ADediting_500772(74856413, -), ADediting_500773(74856435, -), ADediting_500774(74856439, -), ADediting_500775(74856457, -), ADediting_500776(74856463, -), ADediting_500777(74856493, -), ADediting_500778(74856502, -), ADediting_500779(74856672, -), ADediting_500780(74856732, -), ADediting_500781(74856815, -), ADediting_500782(74858947, -), ADediting_500783(74859741, -), ADediting_500784(74859745, -), ADediting_500785(74859754, -), ADediting_500786(74859755, -), ADediting_500787(74860580, -), ADediting_500788(74860605, -), ADediting_500789(74860640, -), ADediting_500790(74860643, -), ADediting_500791(74860648, -), ADediting_500792(74861012, -), ADediting_500793(74864109, -), ADediting_500794(74864186, -), ADediting_500795(74864199, -), ADediting_500796(74864200, -), ADediting_500797(74864282, -), ADediting_500798(74866454, -), ADediting_500799(74866460, -), ADediting_500800(74866508, -), ADediting_500801(74866546, -), ADediting_500802(74866563, -), ADediting_500803(74866564, -), ADediting_500804(74866857, -), ADediting_500805(74866869, -), ADediting_500806(74866893, -), ADediting_500807(74866935, -), ADediting_500808(74866957, -), ADediting_500809(74866961, -), ADediting_500810(74866972, -), ADediting_500811(74866973, -), ADediting_500812(74866974, -), ADediting_500813(74866979, -), ADediting_500814(74867046, -), ADediting_500815(74868579, -), ADediting_500816(74868640, -), ADediting_500817(74868645, -), ADediting_500818(74868732, -), ADediting_500819(74868752, -), ADediting_500820(74868790, -), ADediting_500821(74868794, -), ADediting_500822(74868795, -), ADediting_500823(74868811, -), ADediting_500824(74868819, -), ADediting_500825(74868905, -), ADediting_500826(74868921, -), ADediting_500827(74868939, -), ADediting_500828(74868946, -), ADediting_500829(74868964, -), ADediting_500830(74868976, -), ADediting_500831(74868984, -), ADediting_500832(74869054, -), ADediting_500833(74869092, -), ADediting_500834(74869115, -), ADediting_500835(74869123, -), ADediting_500836(74871810, -), ADediting_500837(74872327, -), ADediting_1540214(74846079, -), ADediting_1540215(74846100, -), ADediting_1540216(74846195, -), ADediting_1540217(74847303, -), ADediting_1540218(74848120, -), ADediting_1540219(74848222, -), ADediting_1540220(74848245, -), ADediting_1540221(74848248, -), ADediting_1540222(74871261, -), ADediting_1623065(74863182, -), ADediting_1623066(74866588, -), ADediting_1623067(74868687, -), |
Top |
RNA editing positional annotations for SCAMP2 using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_500659 | chr15_74845923_- | intronic |
| ADediting_500660 | chr15_74845940_- | intronic |
| ADediting_500661 | chr15_74845941_- | intronic |
| ADediting_500662 | chr15_74845994_- | intronic |
| ADediting_500663 | chr15_74846039_- | intronic |
| ADediting_500664 | chr15_74846065_- | intronic |
| ADediting_500665 | chr15_74846066_- | intronic |
| ADediting_500666 | chr15_74846080_- | intronic |
| ADediting_500667 | chr15_74846091_- | intronic |
| ADediting_500668 | chr15_74846110_- | intronic |
| ADediting_500669 | chr15_74846119_- | intronic |
| ADediting_500670 | chr15_74846170_- | intronic |
| ADediting_500671 | chr15_74846182_- | intronic |
| ADediting_500672 | chr15_74846199_- | intronic |
| ADediting_500673 | chr15_74846200_- | intronic |
| ADediting_500674 | chr15_74846206_- | intronic |
| ADediting_500675 | chr15_74846220_- | intronic |
| ADediting_500676 | chr15_74846238_- | intronic |
| ADediting_500677 | chr15_74846243_- | intronic |
| ADediting_500678 | chr15_74846246_- | intronic |
| ADediting_500679 | chr15_74846345_- | intronic |
| ADediting_500680 | chr15_74846350_- | intronic |
| ADediting_500681 | chr15_74846362_- | intronic |
| ADediting_500682 | chr15_74846394_- | intronic |
| ADediting_500683 | chr15_74846507_- | intronic |
| ADediting_500684 | chr15_74846519_- | intronic |
| ADediting_500685 | chr15_74846520_- | intronic |
| ADediting_500686 | chr15_74846574_- | intronic |
| ADediting_500687 | chr15_74846582_- | intronic |
| ADediting_500688 | chr15_74846594_- | intronic |
| ADediting_500689 | chr15_74846596_- | intronic |
| ADediting_500690 | chr15_74846599_- | intronic |
| ADediting_500691 | chr15_74846652_- | intronic |
| ADediting_500692 | chr15_74846653_- | intronic |
| ADediting_500693 | chr15_74846665_- | intronic |
| ADediting_500694 | chr15_74846678_- | intronic |
| ADediting_500695 | chr15_74846689_- | intronic |
| ADediting_500696 | chr15_74846702_- | intronic |
| ADediting_500697 | chr15_74846718_- | intronic |
| ADediting_500698 | chr15_74847122_- | intronic |
| ADediting_500699 | chr15_74847125_- | intronic |
| ADediting_500700 | chr15_74847152_- | intronic |
| ADediting_500701 | chr15_74847154_- | intronic |
| ADediting_500702 | chr15_74847164_- | intronic |
| ADediting_500703 | chr15_74847188_- | intronic |
| ADediting_500704 | chr15_74847189_- | intronic |
| ADediting_500705 | chr15_74847197_- | intronic |
| ADediting_500706 | chr15_74847200_- | intronic |
| ADediting_500707 | chr15_74847201_- | intronic |
| ADediting_500708 | chr15_74847203_- | intronic |
| ADediting_500709 | chr15_74847207_- | intronic |
| ADediting_500710 | chr15_74847220_- | intronic |
| ADediting_500711 | chr15_74847224_- | intronic |
| ADediting_500712 | chr15_74847229_- | intronic |
| ADediting_500713 | chr15_74847230_- | intronic |
| ADediting_500714 | chr15_74847232_- | intronic |
| ADediting_500715 | chr15_74847272_- | intronic |
| ADediting_500716 | chr15_74847283_- | intronic |
| ADediting_500717 | chr15_74847286_- | intronic |
| ADediting_500718 | chr15_74847293_- | intronic |
| ADediting_500719 | chr15_74847306_- | intronic |
| ADediting_500720 | chr15_74847308_- | intronic |
| ADediting_500721 | chr15_74847344_- | intronic |
| ADediting_500722 | chr15_74847345_- | intronic |
| ADediting_500723 | chr15_74847350_- | intronic |
| ADediting_500724 | chr15_74847366_- | intronic |
| ADediting_500725 | chr15_74847367_- | intronic |
| ADediting_500726 | chr15_74847404_- | intronic |
| ADediting_500727 | chr15_74848001_- | intronic |
| ADediting_500728 | chr15_74848136_- | intronic |
| ADediting_500729 | chr15_74848160_- | intronic |
| ADediting_500730 | chr15_74848165_- | intronic |
| ADediting_500731 | chr15_74848170_- | intronic |
| ADediting_500732 | chr15_74848179_- | intronic |
| ADediting_500733 | chr15_74848182_- | intronic |
| ADediting_500734 | chr15_74848183_- | intronic |
| ADediting_500735 | chr15_74848196_- | intronic |
| ADediting_500736 | chr15_74848206_- | intronic |
| ADediting_500737 | chr15_74848208_- | intronic |
| ADediting_500738 | chr15_74848232_- | intronic |
| ADediting_500739 | chr15_74848235_- | intronic |
| ADediting_500740 | chr15_74848236_- | intronic |
| ADediting_500741 | chr15_74848244_- | intronic |
| ADediting_500742 | chr15_74848247_- | intronic |
| ADediting_500743 | chr15_74848251_- | intronic |
| ADediting_500744 | chr15_74848264_- | intronic |
| ADediting_500745 | chr15_74848265_- | intronic |
| ADediting_500746 | chr15_74848268_- | intronic |
| ADediting_500747 | chr15_74848270_- | intronic |
| ADediting_500748 | chr15_74848272_- | intronic |
| ADediting_500749 | chr15_74848277_- | intronic |
| ADediting_500750 | chr15_74848300_- | intronic |
| ADediting_500751 | chr15_74848301_- | intronic |
| ADediting_500752 | chr15_74848310_- | intronic |
| ADediting_500753 | chr15_74848335_- | intronic |
| ADediting_500754 | chr15_74848341_- | intronic |
| ADediting_500755 | chr15_74855196_- | intronic |
| ADediting_500756 | chr15_74855307_- | intronic |
| ADediting_500757 | chr15_74855374_- | intronic |
| ADediting_500758 | chr15_74855375_- | intronic |
| ADediting_500759 | chr15_74855500_- | intronic |
| ADediting_500760 | chr15_74855604_- | intronic |
| ADediting_500761 | chr15_74855616_- | intronic |
| ADediting_500762 | chr15_74855633_- | intronic |
| ADediting_500763 | chr15_74855669_- | intronic |
| ADediting_500764 | chr15_74855670_- | intronic |
| ADediting_500765 | chr15_74855672_- | intronic |
| ADediting_500766 | chr15_74855677_- | intronic |
| ADediting_500767 | chr15_74856337_- | intronic |
| ADediting_500768 | chr15_74856367_- | intronic |
| ADediting_500769 | chr15_74856372_- | intronic |
| ADediting_500770 | chr15_74856378_- | intronic |
| ADediting_500771 | chr15_74856412_- | intronic |
| ADediting_500772 | chr15_74856413_- | intronic |
| ADediting_500773 | chr15_74856435_- | intronic |
| ADediting_500774 | chr15_74856439_- | intronic |
| ADediting_500775 | chr15_74856457_- | intronic |
| ADediting_500776 | chr15_74856463_- | intronic |
| ADediting_500777 | chr15_74856493_- | intronic |
| ADediting_500778 | chr15_74856502_- | intronic |
| ADediting_500779 | chr15_74856672_- | intronic |
| ADediting_500780 | chr15_74856732_- | intronic |
| ADediting_500781 | chr15_74856815_- | intronic |
| ADediting_500782 | chr15_74858947_- | intronic |
| ADediting_500783 | chr15_74859741_- | intronic |
| ADediting_500784 | chr15_74859745_- | intronic |
| ADediting_500785 | chr15_74859754_- | intronic |
| ADediting_500786 | chr15_74859755_- | intronic |
| ADediting_500787 | chr15_74860580_- | intronic |
| ADediting_500788 | chr15_74860605_- | intronic |
| ADediting_500789 | chr15_74860640_- | intronic |
| ADediting_500790 | chr15_74860643_- | intronic |
| ADediting_500791 | chr15_74860648_- | intronic |
| ADediting_500792 | chr15_74861012_- | intronic |
| ADediting_500793 | chr15_74864109_- | intronic |
| ADediting_500794 | chr15_74864186_- | intronic |
| ADediting_500795 | chr15_74864199_- | intronic |
| ADediting_500796 | chr15_74864200_- | intronic |
| ADediting_500797 | chr15_74864282_- | intronic |
| ADediting_500798 | chr15_74866454_- | intronic |
| ADediting_500799 | chr15_74866460_- | intronic |
| ADediting_500800 | chr15_74866508_- | intronic |
| ADediting_500801 | chr15_74866546_- | intronic |
| ADediting_500802 | chr15_74866563_- | intronic |
| ADediting_500803 | chr15_74866564_- | intronic |
| ADediting_500804 | chr15_74866857_- | intronic |
| ADediting_500805 | chr15_74866869_- | intronic |
| ADediting_500806 | chr15_74866893_- | intronic |
| ADediting_500807 | chr15_74866935_- | intronic |
| ADediting_500808 | chr15_74866957_- | intronic |
| ADediting_500809 | chr15_74866961_- | intronic |
| ADediting_500810 | chr15_74866972_- | intronic |
| ADediting_500811 | chr15_74866973_- | intronic |
| ADediting_500812 | chr15_74866974_- | intronic |
| ADediting_500813 | chr15_74866979_- | intronic |
| ADediting_500814 | chr15_74867046_- | intronic |
| ADediting_500815 | chr15_74868579_- | intronic |
| ADediting_500816 | chr15_74868640_- | intronic |
| ADediting_500817 | chr15_74868645_- | intronic |
| ADediting_500818 | chr15_74868732_- | intronic |
| ADediting_500819 | chr15_74868752_- | intronic |
| ADediting_500820 | chr15_74868790_- | intronic |
| ADediting_500821 | chr15_74868794_- | intronic |
| ADediting_500822 | chr15_74868795_- | intronic |
| ADediting_500823 | chr15_74868811_- | intronic |
| ADediting_500824 | chr15_74868819_- | intronic |
| ADediting_500825 | chr15_74868905_- | intronic |
| ADediting_500826 | chr15_74868921_- | intronic |
| ADediting_500827 | chr15_74868939_- | intronic |
| ADediting_500828 | chr15_74868946_- | intronic |
| ADediting_500829 | chr15_74868964_- | intronic |
| ADediting_500830 | chr15_74868976_- | intronic |
| ADediting_500831 | chr15_74868984_- | intronic |
| ADediting_500832 | chr15_74869054_- | intronic |
| ADediting_500833 | chr15_74869092_- | intronic |
| ADediting_500834 | chr15_74869115_- | intronic |
| ADediting_500835 | chr15_74869123_- | intronic |
| ADediting_500836 | chr15_74871810_- | intronic |
| ADediting_500837 | chr15_74872327_- | intronic |
| ADediting_1540214 | chr15_74846079_- | intronic |
| ADediting_1540215 | chr15_74846100_- | intronic |
| ADediting_1540216 | chr15_74846195_- | intronic |
| ADediting_1540217 | chr15_74847303_- | intronic |
| ADediting_1540218 | chr15_74848120_- | intronic |
| ADediting_1540219 | chr15_74848222_- | intronic |
| ADediting_1540220 | chr15_74848245_- | intronic |
| ADediting_1540221 | chr15_74848248_- | intronic |
| ADediting_1540222 | chr15_74871261_- | intronic |
| ADediting_1623065 | chr15_74863182_- | intronic |
| ADediting_1623066 | chr15_74866588_- | intronic |
| ADediting_1623067 | chr15_74868687_- | intronic |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_500659 | chr15_74845923_- | SINE | Alu | Name=AluJo |
| ADediting_500660 | chr15_74845940_- | SINE | Alu | Name=AluJo |
| ADediting_500661 | chr15_74845941_- | SINE | Alu | Name=AluJo |
| ADediting_500662 | chr15_74845994_- | SINE | Alu | Name=AluJo |
| ADediting_500663 | chr15_74846039_- | SINE | Alu | Name=AluSz |
| ADediting_500664 | chr15_74846065_- | SINE | Alu | Name=AluSz |
| ADediting_500665 | chr15_74846066_- | SINE | Alu | Name=AluSz |
| ADediting_500666 | chr15_74846080_- | SINE | Alu | Name=AluSz |
| ADediting_500667 | chr15_74846091_- | SINE | Alu | Name=AluSz |
| ADediting_500668 | chr15_74846110_- | SINE | Alu | Name=AluSz |
| ADediting_500669 | chr15_74846119_- | SINE | Alu | Name=AluSz |
| ADediting_500670 | chr15_74846170_- | SINE | Alu | Name=AluSz |
| ADediting_500671 | chr15_74846182_- | SINE | Alu | Name=AluSz |
| ADediting_500672 | chr15_74846199_- | SINE | Alu | Name=AluSz |
| ADediting_500673 | chr15_74846200_- | SINE | Alu | Name=AluSz |
| ADediting_500674 | chr15_74846206_- | SINE | Alu | Name=AluSz |
| ADediting_500675 | chr15_74846220_- | SINE | Alu | Name=AluSz |
| ADediting_500676 | chr15_74846238_- | SINE | Alu | Name=AluSz |
| ADediting_500677 | chr15_74846243_- | SINE | Alu | Name=AluSz |
| ADediting_500678 | chr15_74846246_- | SINE | Alu | Name=AluSz |
| ADediting_500679 | chr15_74846345_- | SINE | Alu | Name=AluJo |
| ADediting_500680 | chr15_74846350_- | SINE | Alu | Name=AluJo |
| ADediting_500681 | chr15_74846362_- | SINE | Alu | Name=AluJo |
| ADediting_500682 | chr15_74846394_- | SINE | Alu | Name=AluJo |
| ADediting_500683 | chr15_74846507_- | SINE | Alu | Name=AluYm1 |
| ADediting_500684 | chr15_74846519_- | SINE | Alu | Name=AluYm1 |
| ADediting_500685 | chr15_74846520_- | SINE | Alu | Name=AluYm1 |
| ADediting_500686 | chr15_74846574_- | SINE | Alu | Name=AluYm1 |
| ADediting_500687 | chr15_74846582_- | SINE | Alu | Name=AluYm1 |
| ADediting_500688 | chr15_74846594_- | SINE | Alu | Name=AluYm1 |
| ADediting_500689 | chr15_74846596_- | SINE | Alu | Name=AluYm1 |
| ADediting_500690 | chr15_74846599_- | SINE | Alu | Name=AluYm1 |
| ADediting_500691 | chr15_74846652_- | SINE | Alu | Name=AluYm1 |
| ADediting_500692 | chr15_74846653_- | SINE | Alu | Name=AluYm1 |
| ADediting_500693 | chr15_74846665_- | SINE | Alu | Name=AluYm1 |
| ADediting_500694 | chr15_74846678_- | SINE | Alu | Name=AluYm1 |
| ADediting_500695 | chr15_74846689_- | SINE | Alu | Name=AluYm1 |
| ADediting_500696 | chr15_74846702_- | SINE | Alu | Name=AluYm1 |
| ADediting_500697 | chr15_74846718_- | SINE | Alu | Name=AluYm1 |
| ADediting_500698 | chr15_74847122_- | SINE | Alu | Name=AluSx1 |
| ADediting_500699 | chr15_74847125_- | SINE | Alu | Name=AluSx1 |
| ADediting_500700 | chr15_74847152_- | SINE | Alu | Name=AluSx1 |
| ADediting_500701 | chr15_74847154_- | SINE | Alu | Name=AluSx1 |
| ADediting_500702 | chr15_74847164_- | SINE | Alu | Name=AluSx1 |
| ADediting_500703 | chr15_74847188_- | SINE | Alu | Name=AluSx1 |
| ADediting_500704 | chr15_74847189_- | SINE | Alu | Name=AluSx1 |
| ADediting_500705 | chr15_74847197_- | SINE | Alu | Name=AluSx1 |
| ADediting_500706 | chr15_74847200_- | SINE | Alu | Name=AluSx1 |
| ADediting_500707 | chr15_74847201_- | SINE | Alu | Name=AluSx1 |
| ADediting_500708 | chr15_74847203_- | SINE | Alu | Name=AluSx1 |
| ADediting_500709 | chr15_74847207_- | SINE | Alu | Name=AluSx1 |
| ADediting_500710 | chr15_74847220_- | SINE | Alu | Name=AluSx1 |
| ADediting_500711 | chr15_74847224_- | SINE | Alu | Name=AluSx1 |
| ADediting_500712 | chr15_74847229_- | SINE | Alu | Name=AluSx1 |
| ADediting_500713 | chr15_74847230_- | SINE | Alu | Name=AluSx1 |
| ADediting_500714 | chr15_74847232_- | SINE | Alu | Name=AluSx1 |
| ADediting_500715 | chr15_74847272_- | SINE | Alu | Name=AluSx1 |
| ADediting_500716 | chr15_74847283_- | SINE | Alu | Name=AluSx1 |
| ADediting_500717 | chr15_74847286_- | SINE | Alu | Name=AluSx1 |
| ADediting_500718 | chr15_74847293_- | SINE | Alu | Name=AluSx1 |
| ADediting_500719 | chr15_74847306_- | SINE | Alu | Name=AluSx1 |
| ADediting_500720 | chr15_74847308_- | SINE | Alu | Name=AluSx1 |
| ADediting_500721 | chr15_74847344_- | SINE | Alu | Name=AluSx1 |
| ADediting_500722 | chr15_74847345_- | SINE | Alu | Name=AluSx1 |
| ADediting_500723 | chr15_74847350_- | SINE | Alu | Name=AluSx1 |
| ADediting_500724 | chr15_74847366_- | SINE | Alu | Name=AluSx1 |
| ADediting_500725 | chr15_74847367_- | SINE | Alu | Name=AluSx1 |
| ADediting_500728 | chr15_74848136_- | SINE | Alu | Name=AluJo |
| ADediting_500729 | chr15_74848160_- | SINE | Alu | Name=AluJo |
| ADediting_500730 | chr15_74848165_- | SINE | Alu | Name=AluJo |
| ADediting_500731 | chr15_74848170_- | SINE | Alu | Name=AluJo |
| ADediting_500732 | chr15_74848179_- | SINE | Alu | Name=AluJo |
| ADediting_500733 | chr15_74848182_- | SINE | Alu | Name=AluJo |
| ADediting_500734 | chr15_74848183_- | SINE | Alu | Name=AluJo |
| ADediting_500735 | chr15_74848196_- | SINE | Alu | Name=AluJo |
| ADediting_500736 | chr15_74848206_- | SINE | Alu | Name=AluJo |
| ADediting_500737 | chr15_74848208_- | SINE | Alu | Name=AluJo |
| ADediting_500738 | chr15_74848232_- | SINE | Alu | Name=AluJo |
| ADediting_500739 | chr15_74848235_- | SINE | Alu | Name=AluJo |
| ADediting_500740 | chr15_74848236_- | SINE | Alu | Name=AluJo |
| ADediting_500741 | chr15_74848244_- | SINE | Alu | Name=AluJo |
| ADediting_500742 | chr15_74848247_- | SINE | Alu | Name=AluJo |
| ADediting_500743 | chr15_74848251_- | SINE | Alu | Name=AluJo |
| ADediting_500744 | chr15_74848264_- | SINE | Alu | Name=AluJo |
| ADediting_500745 | chr15_74848265_- | SINE | Alu | Name=AluJo |
| ADediting_500746 | chr15_74848268_- | SINE | Alu | Name=AluJo |
| ADediting_500747 | chr15_74848270_- | SINE | Alu | Name=AluJo |
| ADediting_500748 | chr15_74848272_- | SINE | Alu | Name=AluJo |
| ADediting_500749 | chr15_74848277_- | SINE | Alu | Name=AluJo |
| ADediting_500750 | chr15_74848300_- | SINE | Alu | Name=AluJo |
| ADediting_500751 | chr15_74848301_- | SINE | Alu | Name=AluJo |
| ADediting_500752 | chr15_74848310_- | SINE | Alu | Name=AluJo |
| ADediting_500753 | chr15_74848335_- | SINE | Alu | Name=AluJo |
| ADediting_500754 | chr15_74848341_- | SINE | Alu | Name=AluJo |
| ADediting_500755 | chr15_74855196_- | SINE | Alu | Name=AluSc |
| ADediting_500756 | chr15_74855307_- | SINE | Alu | Name=AluSc |
| ADediting_500757 | chr15_74855374_- | SINE | Alu | Name=AluSc |
| ADediting_500758 | chr15_74855375_- | SINE | Alu | Name=AluSc |
| ADediting_500759 | chr15_74855500_- | SINE | Alu | Name=AluSp |
| ADediting_500760 | chr15_74855604_- | SINE | Alu | Name=AluSp |
| ADediting_500761 | chr15_74855616_- | SINE | Alu | Name=AluSp |
| ADediting_500762 | chr15_74855633_- | SINE | Alu | Name=AluSp |
| ADediting_500763 | chr15_74855669_- | SINE | Alu | Name=AluSp |
| ADediting_500764 | chr15_74855670_- | SINE | Alu | Name=AluSp |
| ADediting_500765 | chr15_74855672_- | SINE | Alu | Name=AluSp |
| ADediting_500766 | chr15_74855677_- | SINE | Alu | Name=AluSp |
| ADediting_500767 | chr15_74856337_- | SINE | Alu | Name=AluSx1 |
| ADediting_500768 | chr15_74856367_- | SINE | Alu | Name=AluSx1 |
| ADediting_500769 | chr15_74856372_- | SINE | Alu | Name=AluSx1 |
| ADediting_500770 | chr15_74856378_- | SINE | Alu | Name=AluSx1 |
| ADediting_500771 | chr15_74856412_- | SINE | Alu | Name=AluSx1 |
| ADediting_500772 | chr15_74856413_- | SINE | Alu | Name=AluSx1 |
| ADediting_500773 | chr15_74856435_- | SINE | Alu | Name=AluSx1 |
| ADediting_500774 | chr15_74856439_- | SINE | Alu | Name=AluSx1 |
| ADediting_500775 | chr15_74856457_- | SINE | Alu | Name=AluSx1 |
| ADediting_500776 | chr15_74856463_- | SINE | Alu | Name=AluSx1 |
| ADediting_500777 | chr15_74856493_- | SINE | Alu | Name=AluSx1 |
| ADediting_500778 | chr15_74856502_- | SINE | Alu | Name=AluSx1 |
| ADediting_500779 | chr15_74856672_- | SINE | Alu | Name=AluJr4 |
| ADediting_500780 | chr15_74856732_- | SINE | Alu | Name=AluJr4 |
| ADediting_500781 | chr15_74856815_- | SINE | Alu | Name=AluJr4 |
| ADediting_500782 | chr15_74858947_- | SINE | Alu | Name=AluY |
| ADediting_500783 | chr15_74859741_- | SINE | Alu | Name=AluSz6 |
| ADediting_500784 | chr15_74859745_- | SINE | Alu | Name=AluSz6 |
| ADediting_500785 | chr15_74859754_- | SINE | Alu | Name=AluSz6 |
| ADediting_500786 | chr15_74859755_- | SINE | Alu | Name=AluSz6 |
| ADediting_500787 | chr15_74860580_- | SINE | Alu | Name=AluSx1 |
| ADediting_500788 | chr15_74860605_- | SINE | Alu | Name=AluSx1 |
| ADediting_500789 | chr15_74860640_- | SINE | Alu | Name=AluSx1 |
| ADediting_500790 | chr15_74860643_- | SINE | Alu | Name=AluSx1 |
| ADediting_500791 | chr15_74860648_- | SINE | Alu | Name=AluSx1 |
| ADediting_500792 | chr15_74861012_- | SINE | Alu | Name=AluSx1 |
| ADediting_500793 | chr15_74864109_- | SINE | Alu | Name=AluSc8 |
| ADediting_500794 | chr15_74864186_- | SINE | Alu | Name=AluSc8 |
| ADediting_500795 | chr15_74864199_- | SINE | Alu | Name=AluSc8 |
| ADediting_500796 | chr15_74864200_- | SINE | Alu | Name=AluSc8 |
| ADediting_500797 | chr15_74864282_- | SINE | Alu | Name=AluSc8 |
| ADediting_500798 | chr15_74866454_- | SINE | Alu | Name=AluSx |
| ADediting_500799 | chr15_74866460_- | SINE | Alu | Name=AluSx |
| ADediting_500800 | chr15_74866508_- | SINE | Alu | Name=AluSx |
| ADediting_500801 | chr15_74866546_- | SINE | Alu | Name=AluSx |
| ADediting_500802 | chr15_74866563_- | SINE | Alu | Name=AluSx |
| ADediting_500803 | chr15_74866564_- | SINE | Alu | Name=AluSx |
| ADediting_500804 | chr15_74866857_- | SINE | Alu | Name=AluSx4 |
| ADediting_500805 | chr15_74866869_- | SINE | Alu | Name=AluSx4 |
| ADediting_500806 | chr15_74866893_- | SINE | Alu | Name=AluSx4 |
| ADediting_500807 | chr15_74866935_- | SINE | Alu | Name=AluSx4 |
| ADediting_500808 | chr15_74866957_- | SINE | Alu | Name=AluSx4 |
| ADediting_500809 | chr15_74866961_- | SINE | Alu | Name=AluSx4 |
| ADediting_500810 | chr15_74866972_- | SINE | Alu | Name=AluSx4 |
| ADediting_500811 | chr15_74866973_- | SINE | Alu | Name=AluSx4 |
| ADediting_500812 | chr15_74866974_- | SINE | Alu | Name=AluSx4 |
| ADediting_500813 | chr15_74866979_- | SINE | Alu | Name=AluSx4 |
| ADediting_500814 | chr15_74867046_- | SINE | Alu | Name=AluSx4 |
| ADediting_500815 | chr15_74868579_- | SINE | Alu | Name=AluSz6 |
| ADediting_500816 | chr15_74868640_- | SINE | Alu | Name=AluSz6 |
| ADediting_500817 | chr15_74868645_- | SINE | Alu | Name=AluSz6 |
| ADediting_500818 | chr15_74868732_- | SINE | Alu | Name=AluSz6 |
| ADediting_500819 | chr15_74868752_- | SINE | Alu | Name=AluSz6 |
| ADediting_500820 | chr15_74868790_- | SINE | Alu | Name=AluSz6 |
| ADediting_500821 | chr15_74868794_- | SINE | Alu | Name=AluSz6 |
| ADediting_500822 | chr15_74868795_- | SINE | Alu | Name=AluSz6 |
| ADediting_500823 | chr15_74868811_- | SINE | Alu | Name=AluSz6 |
| ADediting_500824 | chr15_74868819_- | SINE | Alu | Name=AluSz6 |
| ADediting_500825 | chr15_74868905_- | SINE | Alu | Name=AluSq2 |
| ADediting_500826 | chr15_74868921_- | SINE | Alu | Name=AluSq2 |
| ADediting_500827 | chr15_74868939_- | SINE | Alu | Name=AluSq2 |
| ADediting_500828 | chr15_74868946_- | SINE | Alu | Name=AluSq2 |
| ADediting_500829 | chr15_74868964_- | SINE | Alu | Name=AluSq2 |
| ADediting_500830 | chr15_74868976_- | SINE | Alu | Name=AluSq2 |
| ADediting_500831 | chr15_74868984_- | SINE | Alu | Name=AluSq2 |
| ADediting_500832 | chr15_74869054_- | SINE | Alu | Name=AluSq2 |
| ADediting_500833 | chr15_74869092_- | SINE | Alu | Name=AluSq2 |
| ADediting_500834 | chr15_74869115_- | SINE | Alu | Name=AluSq2 |
| ADediting_500835 | chr15_74869123_- | SINE | Alu | Name=AluSq2 |
| ADediting_500836 | chr15_74871810_- | SINE | Alu | Name=AluSz6 |
| ADediting_500837 | chr15_74872327_- | SINE | Alu | Name=AluSx |
| ADediting_1540214 | chr15_74846079_- | SINE | Alu | Name=AluSz |
| ADediting_1540215 | chr15_74846100_- | SINE | Alu | Name=AluSz |
| ADediting_1540216 | chr15_74846195_- | SINE | Alu | Name=AluSz |
| ADediting_1540217 | chr15_74847303_- | SINE | Alu | Name=AluSx1 |
| ADediting_1540218 | chr15_74848120_- | SINE | Alu | Name=AluJo |
| ADediting_1540219 | chr15_74848222_- | SINE | Alu | Name=AluJo |
| ADediting_1540220 | chr15_74848245_- | SINE | Alu | Name=AluJo |
| ADediting_1540221 | chr15_74848248_- | SINE | Alu | Name=AluJo |
| ADediting_1540222 | chr15_74871261_- | SINE | Alu | Name=AluJr |
| ADediting_1623065 | chr15_74863182_- | SINE | Alu | Name=AluSx1 |
| ADediting_1623066 | chr15_74866588_- | SINE | Alu | Name=AluSx |
| ADediting_1623067 | chr15_74868687_- | SINE | Alu | Name=AluSz6 |
Top |
RNA A-to-I editing events in the alternative splicing sites for SCAMP2 |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
Top |
Differntial gene expression between RNA A-to-I edited versus non-edited samples for SCAMP2 |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
Top |
Protein coding region RNA A-to-I editings for SCAMP2 |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
Top |
The effects of the RNA editing to the miRNA binding sites for SCAMP2 |
| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1391023 | chr8_140732605_- | ENSG00000140497.16 | ENST00000268099.13 | SCAMP2-201 | hsa-miR-151a-3p | chr15 | 74844091 | 74844097 | 7mer-m8 | 74844090 | 74844110 | 150 | -24.57 |
| ADediting_1391023 | chr8_140732605_- | ENSG00000140497.16 | ENST00000566480.5 | SCAMP2-207 | hsa-miR-151a-3p | chr15 | 74844091 | 74844097 | 7mer-m8 | 74844090 | 74844110 | 150 | -24.57 |
| ADediting_286380 | chr11_79422188_- | ENSG00000140497.16 | ENST00000268099.13 | SCAMP2-201 | hsa-miR-5579-3p | chr15 | 74844058 | 74844064 | 7mer-m8 | 74844057 | 74844077 | 149 | -13.78 |
| ADediting_286380 | chr11_79422188_- | ENSG00000140497.16 | ENST00000566480.5 | SCAMP2-207 | hsa-miR-5579-3p | chr15 | 74844058 | 74844064 | 7mer-m8 | 74844057 | 74844077 | 149 | -13.78 |
| ADediting_496066 | chr15_66496985_- | ENSG00000140497.16 | ENST00000268099.13 | SCAMP2-201 | hsa-miR-4512 | chr15 | 74843862 | 74843869 | 8mer-1a | 74843862 | 74843885 | 156 | -24.94 |
| ADediting_496066 | chr15_66496985_- | ENSG00000140497.16 | ENST00000566480.5 | SCAMP2-207 | hsa-miR-4512 | chr15 | 74843862 | 74843869 | 8mer-1a | 74843862 | 74843885 | 156 | -24.94 |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| Differentially expressed gene-miRNA network |
Top |
The effects of the RNA editing to the stability of the RNA structures for SCAMP2 |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
Top |
Relation with ADAR for SCAMP2 |
| Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| CER | ADediting_500669 | chr15_74846119_- | 0.00611741762675999 | 0.222877815404621 | 5.39094556731098e-05 | 0.323497321499475 | 0.038169232494793 | 0.169453877208628 |
| DLPFC | ADediting_500683 | chr15_74846507_- | 0.00127434639818012 | 0.182182288416436 | 0.691622548313446 | 0.0226169241350842 | 2.8158001126266e-15 | 0.428525226912959 |
| DLPFC | ADediting_500685 | chr15_74846520_- | 0.0275849977546207 | 0.125143100868698 | 0.32524100896383 | 0.0560554571326329 | 7.86683222226199e-12 | 0.375729451823548 |
| DLPFC | ADediting_500686 | chr15_74846574_- | 0.00436151499705291 | 0.161500400235113 | 0.0441427100797941 | 0.114402142733683 | 3.37378411085273e-08 | 0.307189736311865 |
| CER | ADediting_500686 | chr15_74846574_- | 0.00343939268750063 | 0.237424369719129 | 0.000171185632986165 | 0.302173304957267 | 0.714322732911491 | -0.0301337009620235 |
| DLPFC | ADediting_500687 | chr15_74846582_- | 0.0139264078504668 | 0.139550341523941 | 0.117266952468504 | 0.0891455634584243 | 6.73546915307431e-08 | 0.300681751740251 |
| DLPFC | ADediting_500690 | chr15_74846599_- | 0.00372232188362635 | 0.164296099041387 | 0.103952776125762 | 0.092525341799382 | 5.11446860317164e-08 | 0.303292513697597 |
| CER | ADediting_500690 | chr15_74846599_- | 0.020721304981519 | 0.18873590105768 | 0.000181639042113632 | 0.30103441432537 | 0.75787717840627 | 0.0253783561342909 |
| TCX | ADediting_500690 | chr15_74846599_- | 0.301628121436084 | 0.0848977032001958 | 0.133885271966792 | -0.122952865994425 | 7.37574910466801e-06 | 0.35685949741356 |
| CER | ADediting_500691 | chr15_74846652_- | 0.00129633995629904 | 0.260284808300452 | 1.09954852906517e-06 | 0.38560225046298 | 0.189287549506847 | 0.107769763453254 |
| CER | ADediting_500695 | chr15_74846689_- | 0.004134420804966 | 0.232868496244844 | 9.17258230909574e-06 | 0.353382986455642 | 0.459549757603154 | 0.060840128258137 |
| TCX | ADediting_500695 | chr15_74846689_- | 0.181079119596353 | 0.109789524228031 | 0.127252558115277 | -0.125074685267468 | 5.67814735426086e-05 | 0.322573104685543 |
| CER | ADediting_500696 | chr15_74846702_- | 0.00759587790931744 | 0.217174693418715 | 1.58724741360383e-05 | 0.344453099595531 | 0.926446698415155 | -0.00760107627573288 |
| TCX | ADediting_500696 | chr15_74846702_- | 0.433918433145137 | 0.0643633287057575 | 0.271554966518374 | -0.090344927781298 | 7.27230360609304e-05 | 0.31812530984583 |
| CER | ADediting_500724 | chr15_74847366_- | 0.031838324154938 | 0.17536222418654 | 9.26756378542574e-05 | 0.313698725782754 | 0.0772495801566635 | 0.144714743332128 |
| TCX | ADediting_500733 | chr15_74848182_- | 0.293560848306532 | 0.0863220022239673 | 0.304749980740639 | -0.084353279994534 | 4.23922866175114e-06 | 0.365511500817854 |
| CER | ADediting_500736 | chr15_74848206_- | 0.019730793862292 | 0.19021019883724 | 0.000124671215988356 | 0.308187680312737 | 0.116864915249907 | 0.128575915056829 |
| TCX | ADediting_500736 | chr15_74848206_- | 0.89011388564484 | 0.0113755219547486 | 0.0573098154780326 | -0.155566215580225 | 6.60926036955906e-07 | 0.39284614926242 |
| TCX | ADediting_500745 | chr15_74848265_- | 0.206381960305278 | 0.103759897069194 | 0.567731378539311 | -0.0470218123056203 | 0.000173451212845548 | 0.301921080993597 |
| TCX | ADediting_500749 | chr15_74848277_- | 0.925887629525895 | -0.00765901564597404 | 0.0370888622331986 | -0.170400441916983 | 0.000172790957290779 | 0.301994268185843 |
| CER | ADediting_500752 | chr15_74848310_- | 0.000902118559134357 | 0.268285739382093 | 7.23053087164242e-07 | 0.39158009218039 | 0.00407975018266056 | 0.233200841848134 |
| TCX | ADediting_500752 | chr15_74848310_- | 0.541346410027708 | 0.0502587397008982 | 0.177565446240532 | -0.110674670281345 | 1.74869366132055e-05 | 0.34284700720717 |
| DLPFC | ADediting_500778 | chr15_74856502_- | 0.554803709747521 | -0.0336690371857083 | 0.0173135364664014 | -0.135099323408604 | 1.56441204928407e-11 | 0.370679018118619 |
| Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 6.21954770312175e-12 | 0.377435765398801 | 2.60197744838615e-08 | 0.309594544623371 | 1.66255628325948e-18 | 0.470795396009654 |
| AC | 9.56970365197905e-49 | 0.762205999030075 | 5.31112809007059e-23 | 0.570668100535354 | 3.7011557826941e-30 | 0.639569038016152 |
| PCC | 2.33460522752865e-05 | 0.300937843801083 | 0.00220377707757605 | 0.220227572718755 | 8.17160220384062e-09 | 0.402036097523684 |
| CER | 0.00022015249656635 | 0.297306926648493 | 0.0218770258138533 | 0.187090686754346 | 1.3868235711958e-17 | 0.624326933913884 |
| TCX | 9.83078379978132e-06 | 0.352269324372731 | 0.00676630013142143 | -0.220238676800605 | 1.09747319407709e-31 | 0.778062110098224 |
| FP | 0.00224141332308703 | 0.227662044855376 | 0.200479392642482 | -0.0964096202918548 | 2.38735767720604e-12 | 0.49415279618145 |
| IFG | 0.0259780352990363 | 0.444558752366619 | 0.100250626695135 | 0.336289837597357 | 1.24131566621991e-05 | 0.755930402948798 |
| PG | 0.00861493866343374 | 0.192116113260297 | 0.865572412142757 | -0.0124963412277674 | 1.87721351020977e-16 | 0.555529289240397 |
| STG | 0.902849376018698 | 0.0135201076802828 | 0.00069578298668454 | -0.362760544730846 | 0.00041719956674161 | 0.376416717658712 |
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Relation with AD stages for SCAMP2 |
| Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| CER | ADediting_500724 | chr15_74847366_- | 0.00019324889214328 | 0.35128231760226 |
| TCX | ADediting_500690 | chr15_74846599_- | 0.000910777850012112 | 0.317534493022509 |
| TCX | ADediting_500733 | chr15_74848182_- | 0.000329646672124854 | 0.342235090983896 |
| Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
| CER | 7.08019036944854e-05 | 0.372815818570286 |
| TCX | 1.20426469034919e-11 | 0.598785770024205 |
| PG | 9.11352250484104e-06 | 0.318962904745221 |
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RelatedDrugs for SCAMP2 |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for SCAMP2 |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
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