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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited versus non-edited samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with AD stages

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene


Gene summary for NDUFC2-KCTD14

check button Gene summary
Gene informationGene symbol

NDUFC2-KCTD14

Gene ID

100532726

Gene nameNDUFC2-KCTD14 readthrough
Synonyms-
Cytomap

11q14.1

Type of geneprotein-coding
DescriptionNADH dehydrogenase [ubiquinone] 1 subunit C2, isoform 2NDUFC2-KCTD14 readthrough transcript protein
Modification date20200313
UniProtAcc

E9PQ53,

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID

Top

RNA A-to-I events for NDUFC2-KCTD14

check buttonRNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure.
* This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage).
all structure

check button RNA editing frequencies across three data sets.
boxplot

check buttonThe number of RNA A-to-I editing events in different types of transcripts (# event, percentage).
boxplot

check button RNA A-to-I editing events in AD.
ADediting_285469(78040738, -), ADediting_285470(78040780, -), ADediting_285471(78049279, -), ADediting_285472(78049349, -), ADediting_285473(78049371, -), ADediting_285474(78049395, -), ADediting_285475(78050751, -), ADediting_285476(78053138, -), ADediting_285477(78053631, -), ADediting_285478(78053743, -), ADediting_285479(78053921, -), ADediting_285480(78054507, -), ADediting_285481(78054533, -), ADediting_285482(78054618, -), ADediting_285483(78055542, -), ADediting_285484(78055546, -), ADediting_285485(78055574, -), ADediting_285486(78055587, -), ADediting_285487(78055588, -), ADediting_285488(78055797, -), ADediting_285489(78056539, -), ADediting_285490(78056587, -), ADediting_285491(78056708, -), ADediting_285492(78056709, -), ADediting_285493(78056747, -), ADediting_285494(78056755, -), ADediting_285495(78056811, -), ADediting_285496(78056832, -), ADediting_285497(78058502, -), ADediting_285498(78058505, -), ADediting_285499(78058521, -), ADediting_285500(78058594, -), ADediting_285501(78059144, -), ADediting_285502(78059179, -), ADediting_285503(78059180, -), ADediting_285504(78059221, -), ADediting_285505(78059304, -), ADediting_285506(78059356, -), ADediting_285507(78059370, -), ADediting_285508(78060309, -), ADediting_285509(78060378, -), ADediting_285510(78060379, -), ADediting_285511(78060537, -), ADediting_285512(78060801, -), ADediting_285513(78060848, -), ADediting_285514(78060942, -), ADediting_285515(78061661, -), ADediting_285516(78061754, -), ADediting_285517(78061755, -), ADediting_285518(78068528, -), ADediting_285519(78068530, -), ADediting_285520(78068534, -), ADediting_285521(78068542, -), ADediting_285522(78068543, -), ADediting_285523(78068582, -), ADediting_285524(78068592, -), ADediting_285525(78068593, -), ADediting_285526(78068602, -), ADediting_285527(78068605, -), ADediting_285528(78068617, -), ADediting_285529(78068619, -), ADediting_285530(78068647, -), ADediting_285531(78068650, -), ADediting_285532(78068655, -), ADediting_285533(78068661, -), ADediting_285534(78068663, -), ADediting_285535(78068666, -), ADediting_285536(78068673, -), ADediting_285537(78068702, -), ADediting_285538(78068738, -), ADediting_285539(78068776, -), ADediting_285540(78068783, -), ADediting_285541(78068904, -), ADediting_285542(78068964, -), ADediting_285543(78069010, -), ADediting_285544(78069026, -), ADediting_285545(78069027, -), ADediting_285546(78069037, -), ADediting_285547(78069053, -), ADediting_285548(78069056, -), ADediting_285549(78069057, -), ADediting_285550(78069058, -), ADediting_285551(78069059, -), ADediting_285552(78069060, -), ADediting_285553(78069065, -), ADediting_285554(78069066, -), ADediting_285555(78069071, -), ADediting_285556(78069101, -), ADediting_285557(78069105, -), ADediting_285558(78069107, -), ADediting_285559(78069131, -), ADediting_285560(78069157, -), ADediting_285561(78069162, -), ADediting_285562(78069163, -), ADediting_285563(78069179, -), ADediting_285564(78073247, -), ADediting_285565(78073572, -), ADediting_285566(78073739, -), ADediting_285567(78073992, -), ADediting_285568(78074079, -), ADediting_285569(78074126, -), ADediting_285570(78074152, -), ADediting_285571(78074153, -), ADediting_285572(78074530, -), ADediting_285573(78074582, -), ADediting_285574(78077035, -), ADediting_285575(78077074, -), ADediting_285576(78077087, -), ADediting_285577(78077088, -), ADediting_285578(78077089, -), ADediting_285579(78077100, -), ADediting_285580(78077109, -), ADediting_285581(78077235, -), ADediting_285582(78077242, -), ADediting_285583(78077658, -), ADediting_285584(78077671, -), ADediting_285585(78077676, -), ADediting_285586(78077680, -), ADediting_285587(78077694, -), ADediting_285588(78077716, -), ADediting_285589(78077720, -), ADediting_285590(78077757, -), ADediting_285591(78077777, -), ADediting_285592(78077837, -), ADediting_285593(78078786, -), ADediting_285594(78078889, -), ADediting_1529007(78045214, -), ADediting_1529008(78045299, -), ADediting_1529009(78049331, -), ADediting_1529010(78052447, -), ADediting_1529011(78053845, -), ADediting_1529012(78054059, -), ADediting_1529013(78054253, -), ADediting_1529014(78054830, -), ADediting_1529015(78055526, -), ADediting_1529016(78056533, -), ADediting_1529017(78056555, -), ADediting_1529018(78056586, -), ADediting_1529019(78056858, -), ADediting_1529020(78058031, -), ADediting_1529021(78058591, -), ADediting_1529022(78058610, -), ADediting_1529023(78061691, -), ADediting_1529024(78063151, -), ADediting_1529025(78063166, -), ADediting_1529026(78068622, -), ADediting_1529027(78068641, -), ADediting_1529028(78069011, -), ADediting_1529029(78069017, -), ADediting_1529030(78069082, -), ADediting_1529031(78069102, -), ADediting_1610902(78068533, -), ADediting_1610903(78068685, -), ADediting_1610904(78068698, -), ADediting_1610905(78068699, -), ADediting_1610906(78068977, -),

Top

RNA editing positional annotations for NDUFC2-KCTD14 using Annovar

check button Protein coding RNA editing(s).
ADeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
ADeditome IDPositionVariant type
ADediting_285469chr11_78040738_-intronic
ADediting_285470chr11_78040780_-intronic
ADediting_285471chr11_78049279_-intronic
ADediting_285472chr11_78049349_-intronic
ADediting_285473chr11_78049371_-intronic
ADediting_285474chr11_78049395_-intronic
ADediting_285475chr11_78050751_-intronic
ADediting_285476chr11_78053138_-intronic
ADediting_285477chr11_78053631_-intronic
ADediting_285478chr11_78053743_-intronic
ADediting_285479chr11_78053921_-intronic
ADediting_285480chr11_78054507_-intronic
ADediting_285481chr11_78054533_-intronic
ADediting_285482chr11_78054618_-intronic
ADediting_285483chr11_78055542_-intronic
ADediting_285484chr11_78055546_-intronic
ADediting_285485chr11_78055574_-intronic
ADediting_285486chr11_78055587_-intronic
ADediting_285487chr11_78055588_-intronic
ADediting_285488chr11_78055797_-intronic
ADediting_285489chr11_78056539_-intronic
ADediting_285490chr11_78056587_-intronic
ADediting_285491chr11_78056708_-intronic
ADediting_285492chr11_78056709_-intronic
ADediting_285493chr11_78056747_-intronic
ADediting_285494chr11_78056755_-intronic
ADediting_285495chr11_78056811_-intronic
ADediting_285496chr11_78056832_-intronic
ADediting_285497chr11_78058502_-intronic
ADediting_285498chr11_78058505_-intronic
ADediting_285499chr11_78058521_-intronic
ADediting_285500chr11_78058594_-intronic
ADediting_285501chr11_78059144_-intronic
ADediting_285502chr11_78059179_-intronic
ADediting_285503chr11_78059180_-intronic
ADediting_285504chr11_78059221_-intronic
ADediting_285505chr11_78059304_-intronic
ADediting_285506chr11_78059356_-intronic
ADediting_285507chr11_78059370_-intronic
ADediting_285508chr11_78060309_-intronic
ADediting_285509chr11_78060378_-intronic
ADediting_285510chr11_78060379_-intronic
ADediting_285511chr11_78060537_-intronic
ADediting_285512chr11_78060801_-intronic
ADediting_285513chr11_78060848_-intronic
ADediting_285514chr11_78060942_-intronic
ADediting_285515chr11_78061661_-intronic
ADediting_285516chr11_78061754_-intronic
ADediting_285517chr11_78061755_-intronic
ADediting_285518chr11_78068528_-UTR3
ADediting_285519chr11_78068530_-UTR3
ADediting_285520chr11_78068534_-UTR3
ADediting_285521chr11_78068542_-UTR3
ADediting_285522chr11_78068543_-UTR3
ADediting_285523chr11_78068582_-UTR3
ADediting_285524chr11_78068592_-UTR3
ADediting_285525chr11_78068593_-UTR3
ADediting_285526chr11_78068602_-UTR3
ADediting_285527chr11_78068605_-UTR3
ADediting_285528chr11_78068617_-UTR3
ADediting_285529chr11_78068619_-UTR3
ADediting_285530chr11_78068647_-UTR3
ADediting_285531chr11_78068650_-UTR3
ADediting_285532chr11_78068655_-UTR3
ADediting_285533chr11_78068661_-UTR3
ADediting_285534chr11_78068663_-UTR3
ADediting_285535chr11_78068666_-UTR3
ADediting_285536chr11_78068673_-UTR3
ADediting_285537chr11_78068702_-UTR3
ADediting_285538chr11_78068738_-UTR3
ADediting_285539chr11_78068776_-UTR3
ADediting_285540chr11_78068783_-UTR3
ADediting_285541chr11_78068904_-UTR3
ADediting_285542chr11_78068964_-UTR3
ADediting_285543chr11_78069010_-UTR3
ADediting_285544chr11_78069026_-UTR3
ADediting_285545chr11_78069027_-UTR3
ADediting_285546chr11_78069037_-UTR3
ADediting_285547chr11_78069053_-UTR3
ADediting_285548chr11_78069056_-UTR3
ADediting_285549chr11_78069057_-UTR3
ADediting_285550chr11_78069058_-UTR3
ADediting_285551chr11_78069059_-UTR3
ADediting_285552chr11_78069060_-UTR3
ADediting_285553chr11_78069065_-UTR3
ADediting_285554chr11_78069066_-UTR3
ADediting_285555chr11_78069071_-UTR3
ADediting_285556chr11_78069101_-UTR3
ADediting_285557chr11_78069105_-UTR3
ADediting_285558chr11_78069107_-UTR3
ADediting_285559chr11_78069131_-UTR3
ADediting_285560chr11_78069157_-UTR3
ADediting_285561chr11_78069162_-UTR3
ADediting_285562chr11_78069163_-UTR3
ADediting_285563chr11_78069179_-UTR3
ADediting_285564chr11_78073247_-intronic
ADediting_285565chr11_78073572_-intronic
ADediting_285566chr11_78073739_-intronic
ADediting_285567chr11_78073992_-intronic
ADediting_285568chr11_78074079_-intronic
ADediting_285569chr11_78074126_-intronic
ADediting_285570chr11_78074152_-intronic
ADediting_285571chr11_78074153_-intronic
ADediting_285572chr11_78074530_-intronic
ADediting_285573chr11_78074582_-intronic
ADediting_285574chr11_78077035_-intronic
ADediting_285575chr11_78077074_-intronic
ADediting_285576chr11_78077087_-intronic
ADediting_285577chr11_78077088_-intronic
ADediting_285578chr11_78077089_-intronic
ADediting_285579chr11_78077100_-intronic
ADediting_285580chr11_78077109_-intronic
ADediting_285581chr11_78077235_-intronic
ADediting_285582chr11_78077242_-intronic
ADediting_285583chr11_78077658_-intronic
ADediting_285584chr11_78077671_-intronic
ADediting_285585chr11_78077676_-intronic
ADediting_285586chr11_78077680_-intronic
ADediting_285587chr11_78077694_-intronic
ADediting_285588chr11_78077716_-intronic
ADediting_285589chr11_78077720_-intronic
ADediting_285590chr11_78077757_-intronic
ADediting_285591chr11_78077777_-intronic
ADediting_285592chr11_78077837_-intronic
ADediting_285593chr11_78078786_-intronic
ADediting_285594chr11_78078889_-intronic
ADediting_1529007chr11_78045214_-intronic
ADediting_1529008chr11_78045299_-intronic
ADediting_1529009chr11_78049331_-intronic
ADediting_1529010chr11_78052447_-intronic
ADediting_1529011chr11_78053845_-intronic
ADediting_1529012chr11_78054059_-intronic
ADediting_1529013chr11_78054253_-intronic
ADediting_1529014chr11_78054830_-intronic
ADediting_1529015chr11_78055526_-intronic
ADediting_1529016chr11_78056533_-intronic
ADediting_1529017chr11_78056555_-intronic
ADediting_1529018chr11_78056586_-intronic
ADediting_1529019chr11_78056858_-intronic
ADediting_1529020chr11_78058031_-intronic
ADediting_1529021chr11_78058591_-intronic
ADediting_1529022chr11_78058610_-intronic
ADediting_1529023chr11_78061691_-intronic
ADediting_1529024chr11_78063151_-intronic
ADediting_1529025chr11_78063166_-intronic
ADediting_1529026chr11_78068622_-UTR3
ADediting_1529027chr11_78068641_-UTR3
ADediting_1529028chr11_78069011_-UTR3
ADediting_1529029chr11_78069017_-UTR3
ADediting_1529030chr11_78069082_-UTR3
ADediting_1529031chr11_78069102_-UTR3
ADediting_1610902chr11_78068533_-UTR3
ADediting_1610903chr11_78068685_-UTR3
ADediting_1610904chr11_78068698_-UTR3
ADediting_1610905chr11_78068699_-UTR3
ADediting_1610906chr11_78068977_-UTR3

check button Repat-regional RNA editing(s).
ADeditome IDPositionRepeat familyRepeat sub familyRepeat name
ADediting_285469chr11_78040738_-SINEAluName=AluSq2
ADediting_285470chr11_78040780_-SINEAluName=AluSq2
ADediting_285471chr11_78049279_-SINEAluName=AluSx
ADediting_285472chr11_78049349_-SINEAluName=AluSx
ADediting_285473chr11_78049371_-SINEAluName=AluSx
ADediting_285474chr11_78049395_-SINEAluName=AluSx
ADediting_285475chr11_78050751_-SINEAluName=FLAM_C
ADediting_285476chr11_78053138_-SINEAluName=AluSx1
ADediting_285477chr11_78053631_-SINEAluName=AluSp
ADediting_285478chr11_78053743_-SINEAluName=AluSp
ADediting_285479chr11_78053921_-SINEAluName=AluJo
ADediting_285480chr11_78054507_-SINEAluName=AluSx1
ADediting_285481chr11_78054533_-SINEAluName=AluSx1
ADediting_285482chr11_78054618_-SINEAluName=AluSx1
ADediting_285483chr11_78055542_-SINEAluName=AluSz6
ADediting_285484chr11_78055546_-SINEAluName=AluSz6
ADediting_285485chr11_78055574_-SINEAluName=AluSz6
ADediting_285486chr11_78055587_-SINEAluName=AluSz6
ADediting_285487chr11_78055588_-SINEAluName=AluSz6
ADediting_285488chr11_78055797_-SINEAluName=AluSx1
ADediting_285489chr11_78056539_-SINEAluName=AluSz6
ADediting_285490chr11_78056587_-SINEAluName=AluSz6
ADediting_285491chr11_78056708_-SINEAluName=AluSz
ADediting_285492chr11_78056709_-SINEAluName=AluSz
ADediting_285493chr11_78056747_-SINEAluName=AluSz
ADediting_285494chr11_78056755_-SINEAluName=AluSz
ADediting_285495chr11_78056811_-SINEAluName=AluSz
ADediting_285496chr11_78056832_-SINEAluName=AluSz
ADediting_285497chr11_78058502_-SINEAluName=AluJb
ADediting_285498chr11_78058505_-SINEAluName=AluJb
ADediting_285499chr11_78058521_-SINEAluName=AluJb
ADediting_285500chr11_78058594_-SINEAluName=AluJb
ADediting_285501chr11_78059144_-SINEAluName=AluSx3
ADediting_285502chr11_78059179_-SINEAluName=AluSx3
ADediting_285503chr11_78059180_-SINEAluName=AluSx3
ADediting_285504chr11_78059221_-SINEAluName=AluSx3
ADediting_285505chr11_78059304_-SINEAluName=AluSx3
ADediting_285506chr11_78059356_-SINEAluName=AluSx3
ADediting_285507chr11_78059370_-SINEAluName=AluSx3
ADediting_285508chr11_78060309_-SINEAluName=AluSx1
ADediting_285509chr11_78060378_-SINEAluName=AluSx1
ADediting_285510chr11_78060379_-SINEAluName=AluSx1
ADediting_285511chr11_78060537_-SINEAluName=AluSx1
ADediting_285512chr11_78060801_-SINEAluName=AluYc
ADediting_285513chr11_78060848_-SINEAluName=AluYc
ADediting_285514chr11_78060942_-SINEAluName=AluYc
ADediting_285515chr11_78061661_-SINEAluName=AluJb
ADediting_285516chr11_78061754_-SINEAluName=AluJb
ADediting_285517chr11_78061755_-SINEAluName=AluJb
ADediting_285518chr11_78068528_-SINEAluName=AluSc
ADediting_285519chr11_78068530_-SINEAluName=AluSc
ADediting_285520chr11_78068534_-SINEAluName=AluSc
ADediting_285521chr11_78068542_-SINEAluName=AluSc
ADediting_285522chr11_78068543_-SINEAluName=AluSc
ADediting_285523chr11_78068582_-SINEAluName=AluSc
ADediting_285524chr11_78068592_-SINEAluName=AluSc
ADediting_285525chr11_78068593_-SINEAluName=AluSc
ADediting_285526chr11_78068602_-SINEAluName=AluSc
ADediting_285527chr11_78068605_-SINEAluName=AluSc
ADediting_285528chr11_78068617_-SINEAluName=AluSc
ADediting_285529chr11_78068619_-SINEAluName=AluSc
ADediting_285530chr11_78068647_-SINEAluName=AluSc
ADediting_285531chr11_78068650_-SINEAluName=AluSc
ADediting_285532chr11_78068655_-SINEAluName=AluSc
ADediting_285533chr11_78068661_-SINEAluName=AluSc
ADediting_285534chr11_78068663_-SINEAluName=AluSc
ADediting_285535chr11_78068666_-SINEAluName=AluSc
ADediting_285536chr11_78068673_-SINEAluName=AluSc
ADediting_285537chr11_78068702_-SINEAluName=AluSc
ADediting_285538chr11_78068738_-SINEAluName=AluSc
ADediting_285539chr11_78068776_-SINEAluName=AluSc
ADediting_285540chr11_78068783_-SINEAluName=AluSc
ADediting_285541chr11_78068904_-SINEAluName=AluJb
ADediting_285542chr11_78068964_-SINEAluName=AluJb
ADediting_285543chr11_78069010_-SINEAluName=AluJb
ADediting_285544chr11_78069026_-SINEAluName=AluJb
ADediting_285545chr11_78069027_-SINEAluName=AluJb
ADediting_285546chr11_78069037_-SINEAluName=AluJb
ADediting_285547chr11_78069053_-SINEAluName=AluJb
ADediting_285548chr11_78069056_-SINEAluName=AluJb
ADediting_285549chr11_78069057_-SINEAluName=AluJb
ADediting_285550chr11_78069058_-SINEAluName=AluJb
ADediting_285551chr11_78069059_-SINEAluName=AluJb
ADediting_285552chr11_78069060_-SINEAluName=AluJb
ADediting_285553chr11_78069065_-SINEAluName=AluJb
ADediting_285554chr11_78069066_-SINEAluName=AluJb
ADediting_285555chr11_78069071_-SINEAluName=AluJb
ADediting_285556chr11_78069101_-SINEAluName=AluJb
ADediting_285557chr11_78069105_-SINEAluName=AluJb
ADediting_285558chr11_78069107_-SINEAluName=AluJb
ADediting_285559chr11_78069131_-SINEAluName=AluJb
ADediting_285560chr11_78069157_-SINEAluName=AluJb
ADediting_285561chr11_78069162_-SINEAluName=AluJb
ADediting_285562chr11_78069163_-SINEAluName=AluJb
ADediting_285563chr11_78069179_-SINEAluName=AluJb
ADediting_285564chr11_78073247_-SINEAluName=AluSx1
ADediting_285565chr11_78073572_-SINEAluName=AluSx1
ADediting_285566chr11_78073739_-SINEAluName=AluSx1
ADediting_285567chr11_78073992_-SINEAluName=AluJo
ADediting_285568chr11_78074079_-SINEAluName=AluJo
ADediting_285569chr11_78074126_-SINEAluName=AluJo
ADediting_285570chr11_78074152_-SINEAluName=AluJo
ADediting_285571chr11_78074153_-SINEAluName=AluJo
ADediting_285572chr11_78074530_-SINEAluName=AluSx
ADediting_285573chr11_78074582_-SINEAluName=AluSx
ADediting_285574chr11_78077035_-SINEAluName=AluJr
ADediting_285575chr11_78077074_-SINEAluName=AluJr
ADediting_285576chr11_78077087_-SINEAluName=AluJr
ADediting_285577chr11_78077088_-SINEAluName=AluJr
ADediting_285578chr11_78077089_-SINEAluName=AluJr
ADediting_285579chr11_78077100_-SINEAluName=AluJr
ADediting_285580chr11_78077109_-SINEAluName=AluJr
ADediting_285581chr11_78077235_-SINEAluName=AluJr
ADediting_285582chr11_78077242_-SINEAluName=AluJr
ADediting_285583chr11_78077658_-SINEAluName=AluJr
ADediting_285584chr11_78077671_-SINEAluName=AluJr
ADediting_285585chr11_78077676_-SINEAluName=AluJr
ADediting_285586chr11_78077680_-SINEAluName=AluJr
ADediting_285587chr11_78077694_-SINEAluName=AluJr
ADediting_285588chr11_78077716_-SINEAluName=AluJr
ADediting_285589chr11_78077720_-SINEAluName=AluJr
ADediting_285590chr11_78077757_-SINEAluName=AluJr
ADediting_285591chr11_78077777_-SINEAluName=AluJr
ADediting_285592chr11_78077837_-SINEAluName=AluJr
ADediting_285593chr11_78078786_-SINEAluName=AluJb
ADediting_285594chr11_78078889_-SINEAluName=AluJb
ADediting_1529007chr11_78045214_-SINEAluName=AluJb
ADediting_1529008chr11_78045299_-SINEAluName=AluJb
ADediting_1529009chr11_78049331_-SINEAluName=AluSx
ADediting_1529010chr11_78052447_-SINEAluName=AluSz
ADediting_1529011chr11_78053845_-SINEAluName=AluJo
ADediting_1529012chr11_78054059_-SINEAluName=AluJo
ADediting_1529013chr11_78054253_-SINEAluName=FLAM_C
ADediting_1529014chr11_78054830_-SINEAluName=AluSx1
ADediting_1529015chr11_78055526_-SINEAluName=AluSz6
ADediting_1529016chr11_78056533_-SINEAluName=AluSz6
ADediting_1529017chr11_78056555_-SINEAluName=AluSz6
ADediting_1529018chr11_78056586_-SINEAluName=AluSz6
ADediting_1529019chr11_78056858_-SINEAluName=AluSz
ADediting_1529020chr11_78058031_-SINEAluName=FLAM_C
ADediting_1529021chr11_78058591_-SINEAluName=AluJb
ADediting_1529022chr11_78058610_-SINEAluName=AluJb
ADediting_1529023chr11_78061691_-SINEAluName=AluJb
ADediting_1529024chr11_78063151_-SINEAluName=AluJo
ADediting_1529025chr11_78063166_-SINEAluName=AluJo
ADediting_1529026chr11_78068622_-SINEAluName=AluSc
ADediting_1529027chr11_78068641_-SINEAluName=AluSc
ADediting_1529028chr11_78069011_-SINEAluName=AluJb
ADediting_1529029chr11_78069017_-SINEAluName=AluJb
ADediting_1529030chr11_78069082_-SINEAluName=AluJb
ADediting_1529031chr11_78069102_-SINEAluName=AluJb
ADediting_1610902chr11_78068533_-SINEAluName=AluSc
ADediting_1610903chr11_78068685_-SINEAluName=AluSc
ADediting_1610904chr11_78068698_-SINEAluName=AluSc
ADediting_1610905chr11_78068699_-SINEAluName=AluSc
ADediting_1610906chr11_78068977_-SINEAluName=AluJb

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RNA A-to-I editing events in the alternative splicing sites for NDUFC2-KCTD14

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeADeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for NDUFC2-KCTD14

check button Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event.
* The grey color means N/A.

check button Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event.
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check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
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check button - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples.
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ADeditome IDChrPositoingSkipped exonENSGENSTs

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Protein coding region RNA A-to-I editings for NDUFC2-KCTD14

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for NDUFC2-KCTD14


check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for NDUFC2-KCTD14

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in miRNA.
ADeditom_IDENSTmir_IDEditing_InformationEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

check button RNA A-to-I editing in mRNA.
ADeditom_IDENSTEditing_InformationEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

check button RNA A-to-I editing in lncRNA.
ADeditom_IDENSTEditing_InformationEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for NDUFC2-KCTD14

check button Correlation between ADAR gene expression and RNA editing frequency
TissueADeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
DLPFCADediting_285474chr11_78049395_-0.04772422545643920.1125431510848020.8896967563959110.007908771457964811.28434794003261e-100.35463979682339
CERADediting_285475chr11_78050751_-0.2294923128112060.0987016636383090.0001121968895434550.3101591224085180.6043121751203350.0426491401417321
DLPFCADediting_285478chr11_78053743_-0.758639769393654-0.01752106250610720.0718298212647865-0.1023889777971757.10225990114135e-090.321303940223783
DLPFCADediting_285485chr11_78055574_-0.372103905437987-0.05086549067820990.0157391813465635-0.1370633513879847.89853567930314e-100.340039177855044
DLPFCADediting_285489chr11_78056539_-0.893103646089536-0.007663004418380540.258355146207613-0.06438949020930587.0029787553076e-100.34103019001782
DLPFCADediting_285495chr11_78056811_-0.5344709224536420.03541353364861890.51082743317363-0.03748462271902373.65764540275266e-080.306437431511592

check button Correlation between ADAR gene expression and this gene's expression
TissueADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
DLPFC8.39885470829785e-540.7345219324632855.36183861214276e-500.7159921349973781.20446862133044e-050.245754341839914
AC4.69324867676889e-900.8973061344477579.69015225851193e-710.849248803842443.17565727167871e-080.341007436667606
PCC3.74693286781457e-330.7306462417622191.53288685203485e-340.7411348317328790.1951668699679830.0941447529862504
CER7.39188953244736e-090.4503074035403641.25705634769977e-120.5379468375435870.256600345665870.0932064400176886
TCX1.59054546727026e-140.574081970055061.98101531627471e-110.5127041985892510.9416855561350660.0060231276626161
IFG0.001435846429402330.6025195616525170.0001473127211958760.6872946344690040.4941029213133960.143391275003646
STG0.09914777834003120.1811430118010260.004232203126745730.3090384856361870.6378021975223860.0521115530237255

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Relation with AD stages for NDUFC2-KCTD14

check button Correlation between AD stages and RNA editing frequency
TissueADeditomIDpositionP-valCoeff.

check button Correlation between AD stages and this gene's expression
TissueP-valCoeff.
CER0.001294853933388350.305679354910522

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RelatedDrugs for NDUFC2-KCTD14

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.0 2018-04-02)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for NDUFC2-KCTD14

check button Diseases associated with this gene.
(DisGeNet 4.0)
GeneDisease IDDisease name# pubmedsSource