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| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for SYNJ2BP-COX16 |
 Gene summary |
| Gene information | Gene symbol | SYNJ2BP-COX16 | Gene ID | 100529257 |
| Gene name | SYNJ2BP-COX16 readthrough | |
| Synonyms | - | |
| Cytomap | 14q24.2 | |
| Type of gene | protein-coding | |
| Description | SYNJ2BP-COX16 protein | |
| Modification date | 20200313 | |
| UniProtAcc | ||
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
Top |
RNA A-to-I events for SYNJ2BP-COX16 |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA editing frequencies across three data sets. |
 |
| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA A-to-I editing events in AD. |
| ADediting_443926(70351975, -), ADediting_443927(70352038, -), ADediting_443928(70352057, -), ADediting_443929(70352061, -), ADediting_443930(70352882, -), ADediting_443931(70353179, -), ADediting_443932(70353185, -), ADediting_443933(70353215, -), ADediting_443934(70353225, -), ADediting_443935(70353246, -), ADediting_443936(70353611, -), ADediting_443937(70360053, -), ADediting_443938(70360174, -), ADediting_443939(70361326, -), ADediting_443940(70362528, -), ADediting_443941(70362551, -), ADediting_443942(70363846, -), ADediting_443943(70364179, -), ADediting_443944(70364230, -), ADediting_443945(70364231, -), ADediting_443946(70364254, -), ADediting_443947(70367320, -), ADediting_443948(70367338, -), ADediting_443949(70367342, -), ADediting_443950(70367370, -), ADediting_443951(70367382, -), ADediting_443952(70367392, -), ADediting_443953(70367396, -), ADediting_443954(70367399, -), ADediting_443955(70367405, -), ADediting_443956(70367413, -), ADediting_443957(70367414, -), ADediting_443958(70367440, -), ADediting_443959(70367450, -), ADediting_443960(70367453, -), ADediting_443961(70367462, -), ADediting_443962(70367479, -), ADediting_443963(70367480, -), ADediting_443964(70367505, -), ADediting_443965(70367510, -), ADediting_443966(70367515, -), ADediting_443967(70367518, -), ADediting_443968(70367524, -), ADediting_443969(70367536, -), ADediting_443970(70367560, -), ADediting_443971(70369189, -), ADediting_443972(70369208, -), ADediting_443973(70369235, -), ADediting_443974(70369241, -), ADediting_443975(70369257, -), ADediting_443976(70369265, -), ADediting_443977(70369270, -), ADediting_443978(70369287, -), ADediting_443979(70369288, -), ADediting_443980(70369289, -), ADediting_443981(70369297, -), ADediting_443982(70369300, -), ADediting_443983(70369307, -), ADediting_443984(70369322, -), ADediting_443985(70369341, -), ADediting_443986(70369345, -), ADediting_443987(70369354, -), ADediting_443988(70369367, -), ADediting_443989(70371442, -), ADediting_443990(70371443, -), ADediting_443991(70371446, -), ADediting_443992(70371475, -), ADediting_443993(70371478, -), ADediting_443994(70371480, -), ADediting_443995(70371481, -), ADediting_443996(70371485, -), ADediting_443997(70371489, -), ADediting_443998(70371543, -), ADediting_443999(70371547, -), ADediting_444000(70371551, -), ADediting_444001(70371556, -), ADediting_444002(70371557, -), ADediting_444003(70371575, -), ADediting_444004(70371583, -), ADediting_444005(70371587, -), ADediting_444006(70371588, -), ADediting_444007(70371589, -), ADediting_444008(70371592, -), ADediting_444009(70371601, -), ADediting_444010(70371607, -), ADediting_444011(70371612, -), ADediting_444012(70371613, -), ADediting_444013(70371614, -), ADediting_444014(70371622, -), ADediting_444015(70371637, -), ADediting_444016(70371638, -), ADediting_444017(70371646, -), ADediting_444018(70371651, -), ADediting_444019(70371652, -), ADediting_444020(70371654, -), ADediting_444021(70371659, -), ADediting_444022(70371663, -), ADediting_444023(70371696, -), ADediting_444024(70372220, -), ADediting_444025(70375399, -), ADediting_444026(70378489, -), ADediting_444027(70378519, -), ADediting_444028(70378564, -), ADediting_444029(70378567, -), ADediting_444030(70378571, -), ADediting_444031(70378581, -), ADediting_444032(70378583, -), ADediting_444033(70378598, -), ADediting_444034(70382047, -), ADediting_444035(70382063, -), ADediting_444036(70382124, -), ADediting_444037(70382184, -), ADediting_444038(70382190, -), ADediting_444039(70382230, -), ADediting_444040(70385454, -), ADediting_444041(70385462, -), ADediting_444042(70385485, -), ADediting_444043(70385497, -), ADediting_444044(70385537, -), ADediting_444045(70385574, -), ADediting_444046(70385576, -), ADediting_444047(70385577, -), ADediting_444048(70385584, -), ADediting_444049(70385585, -), ADediting_444050(70385599, -), ADediting_444051(70385600, -), ADediting_444052(70385653, -), ADediting_444053(70385654, -), ADediting_444054(70385670, -), ADediting_444055(70387575, -), ADediting_444056(70387587, -), ADediting_444057(70387647, -), ADediting_444058(70387650, -), ADediting_444059(70387658, -), ADediting_444060(70387667, -), ADediting_444061(70387675, -), ADediting_444062(70387682, -), ADediting_444063(70387709, -), ADediting_444064(70387719, -), ADediting_444065(70387731, -), ADediting_444066(70387748, -), ADediting_444067(70387749, -), ADediting_444068(70387784, -), ADediting_444069(70389002, -), ADediting_444070(70389024, -), ADediting_444071(70396255, -), ADediting_444072(70396256, -), ADediting_444073(70396389, -), ADediting_444074(70398040, -), ADediting_444075(70401850, -), ADediting_444076(70401882, -), ADediting_444077(70401887, -), ADediting_444078(70401893, -), ADediting_444079(70401916, -), ADediting_444080(70401923, -), ADediting_444081(70401954, -), ADediting_444082(70409013, -), ADediting_444083(70409143, -), ADediting_444084(70409206, -), ADediting_1537570(70353178, -), ADediting_1537571(70353204, -), ADediting_1537572(70353235, -), ADediting_1537573(70360279, -), ADediting_1537574(70360876, -), ADediting_1537575(70361149, -), ADediting_1537576(70361153, -), ADediting_1537577(70361155, -), ADediting_1537578(70361162, -), ADediting_1537579(70361168, -), ADediting_1537580(70361169, -), ADediting_1537581(70361177, -), ADediting_1537582(70361194, -), ADediting_1537583(70361301, -), ADediting_1537584(70361314, -), ADediting_1537585(70361365, -), ADediting_1537586(70361403, -), ADediting_1537587(70361405, -), ADediting_1537588(70361406, -), ADediting_1537589(70362456, -), ADediting_1537590(70362784, -), ADediting_1537591(70362788, -), ADediting_1537592(70362789, -), ADediting_1537593(70362797, -), ADediting_1537594(70362801, -), ADediting_1537595(70362811, -), ADediting_1537596(70362821, -), ADediting_1537597(70362824, -), ADediting_1537598(70362832, -), ADediting_1537599(70363885, -), ADediting_1537600(70363899, -), ADediting_1537601(70363900, -), ADediting_1537602(70363911, -), ADediting_1537603(70363935, -), ADediting_1537604(70363936, -), ADediting_1537605(70369203, -), ADediting_1537606(70371460, -), ADediting_1537607(70371470, -), ADediting_1537608(70371594, -), ADediting_1537609(70371632, -), ADediting_1537610(70381993, -), ADediting_1620122(70352017, -), ADediting_1620123(70352026, -), ADediting_1620124(70352029, -), ADediting_1620125(70352042, -), ADediting_1620126(70352072, -), ADediting_1620127(70352932, -), ADediting_1620128(70369199, -), ADediting_1620129(70371512, -), ADediting_1620130(70385676, -), ADediting_1620131(70408901, -), ADediting_1620132(70408945, -), ADediting_1620133(70409165, -), |
Top |
RNA editing positional annotations for SYNJ2BP-COX16 using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_443926 | chr14_70351975_- | intronic |
| ADediting_443927 | chr14_70352038_- | intronic |
| ADediting_443928 | chr14_70352057_- | intronic |
| ADediting_443929 | chr14_70352061_- | intronic |
| ADediting_443930 | chr14_70352882_- | intronic |
| ADediting_443931 | chr14_70353179_- | intronic |
| ADediting_443932 | chr14_70353185_- | intronic |
| ADediting_443933 | chr14_70353215_- | intronic |
| ADediting_443934 | chr14_70353225_- | intronic |
| ADediting_443935 | chr14_70353246_- | intronic |
| ADediting_443936 | chr14_70353611_- | intronic |
| ADediting_443937 | chr14_70360053_- | intronic |
| ADediting_443938 | chr14_70360174_- | intronic |
| ADediting_443939 | chr14_70361326_- | intronic |
| ADediting_443940 | chr14_70362528_- | intronic |
| ADediting_443941 | chr14_70362551_- | intronic |
| ADediting_443942 | chr14_70363846_- | intronic |
| ADediting_443943 | chr14_70364179_- | intronic |
| ADediting_443944 | chr14_70364230_- | intronic |
| ADediting_443945 | chr14_70364231_- | intronic |
| ADediting_443946 | chr14_70364254_- | intronic |
| ADediting_443947 | chr14_70367320_- | UTR3 |
| ADediting_443948 | chr14_70367338_- | UTR3 |
| ADediting_443949 | chr14_70367342_- | UTR3 |
| ADediting_443950 | chr14_70367370_- | UTR3 |
| ADediting_443951 | chr14_70367382_- | UTR3 |
| ADediting_443952 | chr14_70367392_- | UTR3 |
| ADediting_443953 | chr14_70367396_- | UTR3 |
| ADediting_443954 | chr14_70367399_- | UTR3 |
| ADediting_443955 | chr14_70367405_- | UTR3 |
| ADediting_443956 | chr14_70367413_- | UTR3 |
| ADediting_443957 | chr14_70367414_- | UTR3 |
| ADediting_443958 | chr14_70367440_- | UTR3 |
| ADediting_443959 | chr14_70367450_- | UTR3 |
| ADediting_443960 | chr14_70367453_- | UTR3 |
| ADediting_443961 | chr14_70367462_- | UTR3 |
| ADediting_443962 | chr14_70367479_- | UTR3 |
| ADediting_443963 | chr14_70367480_- | UTR3 |
| ADediting_443964 | chr14_70367505_- | UTR3 |
| ADediting_443965 | chr14_70367510_- | UTR3 |
| ADediting_443966 | chr14_70367515_- | UTR3 |
| ADediting_443967 | chr14_70367518_- | UTR3 |
| ADediting_443968 | chr14_70367524_- | UTR3 |
| ADediting_443969 | chr14_70367536_- | UTR3 |
| ADediting_443970 | chr14_70367560_- | UTR3 |
| ADediting_443971 | chr14_70369189_- | UTR3 |
| ADediting_443972 | chr14_70369208_- | UTR3 |
| ADediting_443973 | chr14_70369235_- | UTR3 |
| ADediting_443974 | chr14_70369241_- | UTR3 |
| ADediting_443975 | chr14_70369257_- | UTR3 |
| ADediting_443976 | chr14_70369265_- | UTR3 |
| ADediting_443977 | chr14_70369270_- | UTR3 |
| ADediting_443978 | chr14_70369287_- | UTR3 |
| ADediting_443979 | chr14_70369288_- | UTR3 |
| ADediting_443980 | chr14_70369289_- | UTR3 |
| ADediting_443981 | chr14_70369297_- | UTR3 |
| ADediting_443982 | chr14_70369300_- | UTR3 |
| ADediting_443983 | chr14_70369307_- | UTR3 |
| ADediting_443984 | chr14_70369322_- | UTR3 |
| ADediting_443985 | chr14_70369341_- | UTR3 |
| ADediting_443986 | chr14_70369345_- | UTR3 |
| ADediting_443987 | chr14_70369354_- | UTR3 |
| ADediting_443988 | chr14_70369367_- | UTR3 |
| ADediting_443989 | chr14_70371442_- | UTR3 |
| ADediting_443990 | chr14_70371443_- | UTR3 |
| ADediting_443991 | chr14_70371446_- | UTR3 |
| ADediting_443992 | chr14_70371475_- | UTR3 |
| ADediting_443993 | chr14_70371478_- | UTR3 |
| ADediting_443994 | chr14_70371480_- | UTR3 |
| ADediting_443995 | chr14_70371481_- | UTR3 |
| ADediting_443996 | chr14_70371485_- | UTR3 |
| ADediting_443997 | chr14_70371489_- | UTR3 |
| ADediting_443998 | chr14_70371543_- | UTR3 |
| ADediting_443999 | chr14_70371547_- | UTR3 |
| ADediting_444000 | chr14_70371551_- | UTR3 |
| ADediting_444001 | chr14_70371556_- | UTR3 |
| ADediting_444002 | chr14_70371557_- | UTR3 |
| ADediting_444003 | chr14_70371575_- | UTR3 |
| ADediting_444004 | chr14_70371583_- | UTR3 |
| ADediting_444005 | chr14_70371587_- | UTR3 |
| ADediting_444006 | chr14_70371588_- | UTR3 |
| ADediting_444007 | chr14_70371589_- | UTR3 |
| ADediting_444008 | chr14_70371592_- | UTR3 |
| ADediting_444009 | chr14_70371601_- | UTR3 |
| ADediting_444010 | chr14_70371607_- | UTR3 |
| ADediting_444011 | chr14_70371612_- | UTR3 |
| ADediting_444012 | chr14_70371613_- | UTR3 |
| ADediting_444013 | chr14_70371614_- | UTR3 |
| ADediting_444014 | chr14_70371622_- | UTR3 |
| ADediting_444015 | chr14_70371637_- | UTR3 |
| ADediting_444016 | chr14_70371638_- | UTR3 |
| ADediting_444017 | chr14_70371646_- | UTR3 |
| ADediting_444018 | chr14_70371651_- | UTR3 |
| ADediting_444019 | chr14_70371652_- | UTR3 |
| ADediting_444020 | chr14_70371654_- | UTR3 |
| ADediting_444021 | chr14_70371659_- | UTR3 |
| ADediting_444022 | chr14_70371663_- | UTR3 |
| ADediting_444023 | chr14_70371696_- | UTR3 |
| ADediting_444024 | chr14_70372220_- | UTR3 |
| ADediting_444025 | chr14_70375399_- | intronic |
| ADediting_444026 | chr14_70378489_- | intronic |
| ADediting_444027 | chr14_70378519_- | intronic |
| ADediting_444028 | chr14_70378564_- | intronic |
| ADediting_444029 | chr14_70378567_- | intronic |
| ADediting_444030 | chr14_70378571_- | intronic |
| ADediting_444031 | chr14_70378581_- | intronic |
| ADediting_444032 | chr14_70378583_- | intronic |
| ADediting_444033 | chr14_70378598_- | intronic |
| ADediting_444034 | chr14_70382047_- | intronic |
| ADediting_444035 | chr14_70382063_- | intronic |
| ADediting_444036 | chr14_70382124_- | intronic |
| ADediting_444037 | chr14_70382184_- | intronic |
| ADediting_444038 | chr14_70382190_- | intronic |
| ADediting_444039 | chr14_70382230_- | intronic |
| ADediting_444040 | chr14_70385454_- | intronic |
| ADediting_444041 | chr14_70385462_- | intronic |
| ADediting_444042 | chr14_70385485_- | intronic |
| ADediting_444043 | chr14_70385497_- | intronic |
| ADediting_444044 | chr14_70385537_- | intronic |
| ADediting_444045 | chr14_70385574_- | intronic |
| ADediting_444046 | chr14_70385576_- | intronic |
| ADediting_444047 | chr14_70385577_- | intronic |
| ADediting_444048 | chr14_70385584_- | intronic |
| ADediting_444049 | chr14_70385585_- | intronic |
| ADediting_444050 | chr14_70385599_- | intronic |
| ADediting_444051 | chr14_70385600_- | intronic |
| ADediting_444052 | chr14_70385653_- | intronic |
| ADediting_444053 | chr14_70385654_- | intronic |
| ADediting_444054 | chr14_70385670_- | intronic |
| ADediting_444055 | chr14_70387575_- | intronic |
| ADediting_444056 | chr14_70387587_- | intronic |
| ADediting_444057 | chr14_70387647_- | intronic |
| ADediting_444058 | chr14_70387650_- | intronic |
| ADediting_444059 | chr14_70387658_- | intronic |
| ADediting_444060 | chr14_70387667_- | intronic |
| ADediting_444061 | chr14_70387675_- | intronic |
| ADediting_444062 | chr14_70387682_- | intronic |
| ADediting_444063 | chr14_70387709_- | intronic |
| ADediting_444064 | chr14_70387719_- | intronic |
| ADediting_444065 | chr14_70387731_- | intronic |
| ADediting_444066 | chr14_70387748_- | intronic |
| ADediting_444067 | chr14_70387749_- | intronic |
| ADediting_444068 | chr14_70387784_- | intronic |
| ADediting_444069 | chr14_70389002_- | intronic |
| ADediting_444070 | chr14_70389024_- | intronic |
| ADediting_444071 | chr14_70396255_- | intronic |
| ADediting_444072 | chr14_70396256_- | intronic |
| ADediting_444073 | chr14_70396389_- | intronic |
| ADediting_444074 | chr14_70398040_- | intronic |
| ADediting_444075 | chr14_70401850_- | intronic |
| ADediting_444076 | chr14_70401882_- | intronic |
| ADediting_444077 | chr14_70401887_- | intronic |
| ADediting_444078 | chr14_70401893_- | intronic |
| ADediting_444079 | chr14_70401916_- | intronic |
| ADediting_444080 | chr14_70401923_- | intronic |
| ADediting_444081 | chr14_70401954_- | intronic |
| ADediting_444082 | chr14_70409013_- | intronic |
| ADediting_444083 | chr14_70409143_- | intronic |
| ADediting_444084 | chr14_70409206_- | intronic |
| ADediting_1537570 | chr14_70353178_- | intronic |
| ADediting_1537571 | chr14_70353204_- | intronic |
| ADediting_1537572 | chr14_70353235_- | intronic |
| ADediting_1537573 | chr14_70360279_- | intronic |
| ADediting_1537574 | chr14_70360876_- | intronic |
| ADediting_1537575 | chr14_70361149_- | intronic |
| ADediting_1537576 | chr14_70361153_- | intronic |
| ADediting_1537577 | chr14_70361155_- | intronic |
| ADediting_1537578 | chr14_70361162_- | intronic |
| ADediting_1537579 | chr14_70361168_- | intronic |
| ADediting_1537580 | chr14_70361169_- | intronic |
| ADediting_1537581 | chr14_70361177_- | intronic |
| ADediting_1537582 | chr14_70361194_- | intronic |
| ADediting_1537583 | chr14_70361301_- | intronic |
| ADediting_1537584 | chr14_70361314_- | intronic |
| ADediting_1537585 | chr14_70361365_- | intronic |
| ADediting_1537586 | chr14_70361403_- | intronic |
| ADediting_1537587 | chr14_70361405_- | intronic |
| ADediting_1537588 | chr14_70361406_- | intronic |
| ADediting_1537589 | chr14_70362456_- | intronic |
| ADediting_1537590 | chr14_70362784_- | intronic |
| ADediting_1537591 | chr14_70362788_- | intronic |
| ADediting_1537592 | chr14_70362789_- | intronic |
| ADediting_1537593 | chr14_70362797_- | intronic |
| ADediting_1537594 | chr14_70362801_- | intronic |
| ADediting_1537595 | chr14_70362811_- | intronic |
| ADediting_1537596 | chr14_70362821_- | intronic |
| ADediting_1537597 | chr14_70362824_- | intronic |
| ADediting_1537598 | chr14_70362832_- | intronic |
| ADediting_1537599 | chr14_70363885_- | intronic |
| ADediting_1537600 | chr14_70363899_- | intronic |
| ADediting_1537601 | chr14_70363900_- | intronic |
| ADediting_1537602 | chr14_70363911_- | intronic |
| ADediting_1537603 | chr14_70363935_- | intronic |
| ADediting_1537604 | chr14_70363936_- | intronic |
| ADediting_1537605 | chr14_70369203_- | UTR3 |
| ADediting_1537606 | chr14_70371460_- | UTR3 |
| ADediting_1537607 | chr14_70371470_- | UTR3 |
| ADediting_1537608 | chr14_70371594_- | UTR3 |
| ADediting_1537609 | chr14_70371632_- | UTR3 |
| ADediting_1537610 | chr14_70381993_- | intronic |
| ADediting_1620122 | chr14_70352017_- | intronic |
| ADediting_1620123 | chr14_70352026_- | intronic |
| ADediting_1620124 | chr14_70352029_- | intronic |
| ADediting_1620125 | chr14_70352042_- | intronic |
| ADediting_1620126 | chr14_70352072_- | intronic |
| ADediting_1620127 | chr14_70352932_- | intronic |
| ADediting_1620128 | chr14_70369199_- | UTR3 |
| ADediting_1620129 | chr14_70371512_- | UTR3 |
| ADediting_1620130 | chr14_70385676_- | intronic |
| ADediting_1620131 | chr14_70408901_- | intronic |
| ADediting_1620132 | chr14_70408945_- | intronic |
| ADediting_1620133 | chr14_70409165_- | intronic |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_443931 | chr14_70353179_- | SINE | Alu | Name=AluSx4 |
| ADediting_443932 | chr14_70353185_- | SINE | Alu | Name=AluSx4 |
| ADediting_443933 | chr14_70353215_- | SINE | Alu | Name=AluSx4 |
| ADediting_443934 | chr14_70353225_- | SINE | Alu | Name=AluSx4 |
| ADediting_443935 | chr14_70353246_- | SINE | Alu | Name=AluSx4 |
| ADediting_443936 | chr14_70353611_- | SINE | Alu | Name=AluSx3 |
| ADediting_443937 | chr14_70360053_- | SINE | Alu | Name=AluSq10 |
| ADediting_443938 | chr14_70360174_- | SINE | Alu | Name=AluSq10 |
| ADediting_443939 | chr14_70361326_- | SINE | Alu | Name=AluJb |
| ADediting_443940 | chr14_70362528_- | SINE | Alu | Name=AluSx |
| ADediting_443941 | chr14_70362551_- | SINE | Alu | Name=AluSx |
| ADediting_443942 | chr14_70363846_- | SINE | Alu | Name=FLAM_C |
| ADediting_443943 | chr14_70364179_- | SINE | Alu | Name=AluJb |
| ADediting_443944 | chr14_70364230_- | SINE | Alu | Name=AluJb |
| ADediting_443945 | chr14_70364231_- | SINE | Alu | Name=AluJb |
| ADediting_443946 | chr14_70364254_- | SINE | Alu | Name=AluJb |
| ADediting_443947 | chr14_70367320_- | SINE | Alu | Name=AluSg |
| ADediting_443948 | chr14_70367338_- | SINE | Alu | Name=AluSg |
| ADediting_443949 | chr14_70367342_- | SINE | Alu | Name=AluSg |
| ADediting_443950 | chr14_70367370_- | SINE | Alu | Name=AluSg |
| ADediting_443951 | chr14_70367382_- | SINE | Alu | Name=AluSg |
| ADediting_443952 | chr14_70367392_- | SINE | Alu | Name=AluSg |
| ADediting_443953 | chr14_70367396_- | SINE | Alu | Name=AluSg |
| ADediting_443954 | chr14_70367399_- | SINE | Alu | Name=AluSg |
| ADediting_443955 | chr14_70367405_- | SINE | Alu | Name=AluSg |
| ADediting_443956 | chr14_70367413_- | SINE | Alu | Name=AluSg |
| ADediting_443957 | chr14_70367414_- | SINE | Alu | Name=AluSg |
| ADediting_443958 | chr14_70367440_- | SINE | Alu | Name=AluSg |
| ADediting_443959 | chr14_70367450_- | SINE | Alu | Name=AluSg |
| ADediting_443960 | chr14_70367453_- | SINE | Alu | Name=AluSg |
| ADediting_443961 | chr14_70367462_- | SINE | Alu | Name=AluSg |
| ADediting_443962 | chr14_70367479_- | SINE | Alu | Name=AluSg |
| ADediting_443963 | chr14_70367480_- | SINE | Alu | Name=AluSg |
| ADediting_443964 | chr14_70367505_- | SINE | Alu | Name=AluSg |
| ADediting_443965 | chr14_70367510_- | SINE | Alu | Name=AluSg |
| ADediting_443966 | chr14_70367515_- | SINE | Alu | Name=AluSg |
| ADediting_443967 | chr14_70367518_- | SINE | Alu | Name=AluSg |
| ADediting_443968 | chr14_70367524_- | SINE | Alu | Name=AluSg |
| ADediting_443969 | chr14_70367536_- | SINE | Alu | Name=AluSg |
| ADediting_443970 | chr14_70367560_- | SINE | Alu | Name=AluSg |
| ADediting_443971 | chr14_70369189_- | SINE | Alu | Name=AluJb |
| ADediting_443972 | chr14_70369208_- | SINE | Alu | Name=AluJb |
| ADediting_443973 | chr14_70369235_- | SINE | Alu | Name=AluJb |
| ADediting_443974 | chr14_70369241_- | SINE | Alu | Name=AluJb |
| ADediting_443975 | chr14_70369257_- | SINE | Alu | Name=AluJb |
| ADediting_443976 | chr14_70369265_- | SINE | Alu | Name=AluJb |
| ADediting_443977 | chr14_70369270_- | SINE | Alu | Name=AluJb |
| ADediting_443978 | chr14_70369287_- | SINE | Alu | Name=AluJb |
| ADediting_443979 | chr14_70369288_- | SINE | Alu | Name=AluJb |
| ADediting_443980 | chr14_70369289_- | SINE | Alu | Name=AluJb |
| ADediting_443981 | chr14_70369297_- | SINE | Alu | Name=AluJb |
| ADediting_443982 | chr14_70369300_- | SINE | Alu | Name=AluJb |
| ADediting_443983 | chr14_70369307_- | SINE | Alu | Name=AluJb |
| ADediting_443984 | chr14_70369322_- | SINE | Alu | Name=AluJb |
| ADediting_443985 | chr14_70369341_- | SINE | Alu | Name=AluJb |
| ADediting_443986 | chr14_70369345_- | SINE | Alu | Name=AluJb |
| ADediting_443987 | chr14_70369354_- | SINE | Alu | Name=AluJb |
| ADediting_443988 | chr14_70369367_- | SINE | Alu | Name=AluJb |
| ADediting_443989 | chr14_70371442_- | SINE | Alu | Name=AluSg |
| ADediting_443990 | chr14_70371443_- | SINE | Alu | Name=AluSg |
| ADediting_443991 | chr14_70371446_- | SINE | Alu | Name=AluSg |
| ADediting_443992 | chr14_70371475_- | SINE | Alu | Name=AluSg |
| ADediting_443993 | chr14_70371478_- | SINE | Alu | Name=AluSg |
| ADediting_443994 | chr14_70371480_- | SINE | Alu | Name=AluSg |
| ADediting_443995 | chr14_70371481_- | SINE | Alu | Name=AluSg |
| ADediting_443996 | chr14_70371485_- | SINE | Alu | Name=AluSg |
| ADediting_443997 | chr14_70371489_- | SINE | Alu | Name=AluSg |
| ADediting_443998 | chr14_70371543_- | SINE | Alu | Name=AluSg |
| ADediting_443999 | chr14_70371547_- | SINE | Alu | Name=AluSg |
| ADediting_444000 | chr14_70371551_- | SINE | Alu | Name=AluSg |
| ADediting_444001 | chr14_70371556_- | SINE | Alu | Name=AluSg |
| ADediting_444002 | chr14_70371557_- | SINE | Alu | Name=AluSg |
| ADediting_444003 | chr14_70371575_- | SINE | Alu | Name=AluSg |
| ADediting_444004 | chr14_70371583_- | SINE | Alu | Name=AluSg |
| ADediting_444005 | chr14_70371587_- | SINE | Alu | Name=AluSg |
| ADediting_444006 | chr14_70371588_- | SINE | Alu | Name=AluSg |
| ADediting_444007 | chr14_70371589_- | SINE | Alu | Name=AluSg |
| ADediting_444008 | chr14_70371592_- | SINE | Alu | Name=AluSg |
| ADediting_444009 | chr14_70371601_- | SINE | Alu | Name=AluSg |
| ADediting_444010 | chr14_70371607_- | SINE | Alu | Name=AluSg |
| ADediting_444011 | chr14_70371612_- | SINE | Alu | Name=AluSg |
| ADediting_444012 | chr14_70371613_- | SINE | Alu | Name=AluSg |
| ADediting_444013 | chr14_70371614_- | SINE | Alu | Name=AluSg |
| ADediting_444014 | chr14_70371622_- | SINE | Alu | Name=AluSg |
| ADediting_444015 | chr14_70371637_- | SINE | Alu | Name=AluSg |
| ADediting_444016 | chr14_70371638_- | SINE | Alu | Name=AluSg |
| ADediting_444017 | chr14_70371646_- | SINE | Alu | Name=AluSg |
| ADediting_444018 | chr14_70371651_- | SINE | Alu | Name=AluSg |
| ADediting_444019 | chr14_70371652_- | SINE | Alu | Name=AluSg |
| ADediting_444020 | chr14_70371654_- | SINE | Alu | Name=AluSg |
| ADediting_444021 | chr14_70371659_- | SINE | Alu | Name=AluSg |
| ADediting_444022 | chr14_70371663_- | SINE | Alu | Name=AluSg |
| ADediting_444023 | chr14_70371696_- | SINE | Alu | Name=AluSg |
| ADediting_444024 | chr14_70372220_- | SINE | Alu | Name=FLAM_C |
| ADediting_444025 | chr14_70375399_- | SINE | Alu | Name=AluSz6 |
| ADediting_444026 | chr14_70378489_- | SINE | Alu | Name=AluJo |
| ADediting_444027 | chr14_70378519_- | SINE | Alu | Name=AluJo |
| ADediting_444028 | chr14_70378564_- | SINE | Alu | Name=AluJo |
| ADediting_444029 | chr14_70378567_- | SINE | Alu | Name=AluJo |
| ADediting_444030 | chr14_70378571_- | SINE | Alu | Name=AluJo |
| ADediting_444031 | chr14_70378581_- | SINE | Alu | Name=AluJo |
| ADediting_444032 | chr14_70378583_- | SINE | Alu | Name=AluJo |
| ADediting_444034 | chr14_70382047_- | SINE | Alu | Name=AluY |
| ADediting_444035 | chr14_70382063_- | SINE | Alu | Name=AluY |
| ADediting_444036 | chr14_70382124_- | SINE | Alu | Name=AluY |
| ADediting_444037 | chr14_70382184_- | SINE | Alu | Name=AluY |
| ADediting_444038 | chr14_70382190_- | SINE | Alu | Name=AluY |
| ADediting_444039 | chr14_70382230_- | SINE | Alu | Name=AluY |
| ADediting_444040 | chr14_70385454_- | SINE | Alu | Name=AluSz6 |
| ADediting_444041 | chr14_70385462_- | SINE | Alu | Name=AluSz6 |
| ADediting_444042 | chr14_70385485_- | SINE | Alu | Name=AluSz6 |
| ADediting_444043 | chr14_70385497_- | SINE | Alu | Name=AluSz6 |
| ADediting_444044 | chr14_70385537_- | SINE | Alu | Name=AluSz6 |
| ADediting_444045 | chr14_70385574_- | SINE | Alu | Name=AluSz6 |
| ADediting_444046 | chr14_70385576_- | SINE | Alu | Name=AluSz6 |
| ADediting_444047 | chr14_70385577_- | SINE | Alu | Name=AluSz6 |
| ADediting_444048 | chr14_70385584_- | SINE | Alu | Name=AluSz6 |
| ADediting_444049 | chr14_70385585_- | SINE | Alu | Name=AluSz6 |
| ADediting_444050 | chr14_70385599_- | SINE | Alu | Name=AluSz6 |
| ADediting_444051 | chr14_70385600_- | SINE | Alu | Name=AluSz6 |
| ADediting_444052 | chr14_70385653_- | SINE | Alu | Name=AluSz6 |
| ADediting_444053 | chr14_70385654_- | SINE | Alu | Name=AluSz6 |
| ADediting_444054 | chr14_70385670_- | SINE | Alu | Name=AluSz6 |
| ADediting_444055 | chr14_70387575_- | SINE | Alu | Name=AluSx3 |
| ADediting_444056 | chr14_70387587_- | SINE | Alu | Name=AluSx3 |
| ADediting_444057 | chr14_70387647_- | SINE | Alu | Name=AluSx3 |
| ADediting_444058 | chr14_70387650_- | SINE | Alu | Name=AluSx3 |
| ADediting_444059 | chr14_70387658_- | SINE | Alu | Name=AluSx3 |
| ADediting_444060 | chr14_70387667_- | SINE | Alu | Name=AluSx3 |
| ADediting_444061 | chr14_70387675_- | SINE | Alu | Name=AluSx3 |
| ADediting_444062 | chr14_70387682_- | SINE | Alu | Name=AluSx3 |
| ADediting_444063 | chr14_70387709_- | SINE | Alu | Name=AluSx3 |
| ADediting_444064 | chr14_70387719_- | SINE | Alu | Name=AluSx3 |
| ADediting_444065 | chr14_70387731_- | SINE | Alu | Name=AluSx3 |
| ADediting_444066 | chr14_70387748_- | SINE | Alu | Name=AluSx3 |
| ADediting_444067 | chr14_70387749_- | SINE | Alu | Name=AluSx3 |
| ADediting_444068 | chr14_70387784_- | SINE | Alu | Name=AluSx3 |
| ADediting_444069 | chr14_70389002_- | SINE | Alu | Name=FLAM_C |
| ADediting_444070 | chr14_70389024_- | SINE | Alu | Name=FLAM_C |
| ADediting_444071 | chr14_70396255_- | SINE | Alu | Name=AluY |
| ADediting_444072 | chr14_70396256_- | SINE | Alu | Name=AluY |
| ADediting_444073 | chr14_70396389_- | SINE | Alu | Name=AluY |
| ADediting_444074 | chr14_70398040_- | LTR | ERV1 | Name=MER52D |
| ADediting_444075 | chr14_70401850_- | SINE | Alu | Name=AluJr |
| ADediting_444076 | chr14_70401882_- | SINE | Alu | Name=AluJr |
| ADediting_444077 | chr14_70401887_- | SINE | Alu | Name=AluJr |
| ADediting_444078 | chr14_70401893_- | SINE | Alu | Name=AluJr |
| ADediting_444079 | chr14_70401916_- | SINE | Alu | Name=AluJr |
| ADediting_444080 | chr14_70401923_- | SINE | Alu | Name=AluJr |
| ADediting_444081 | chr14_70401954_- | LTR | ERV1 | Name=LTR49-int |
| ADediting_444082 | chr14_70409013_- | SINE | Alu | Name=AluJr |
| ADediting_444083 | chr14_70409143_- | SINE | Alu | Name=AluJr |
| ADediting_444084 | chr14_70409206_- | SINE | Alu | Name=AluJr |
| ADediting_1537570 | chr14_70353178_- | SINE | Alu | Name=AluSx4 |
| ADediting_1537571 | chr14_70353204_- | SINE | Alu | Name=AluSx4 |
| ADediting_1537572 | chr14_70353235_- | SINE | Alu | Name=AluSx4 |
| ADediting_1537573 | chr14_70360279_- | SINE | Alu | Name=AluSq10 |
| ADediting_1537575 | chr14_70361149_- | SINE | Alu | Name=AluJb |
| ADediting_1537576 | chr14_70361153_- | SINE | Alu | Name=AluJb |
| ADediting_1537577 | chr14_70361155_- | SINE | Alu | Name=AluJb |
| ADediting_1537578 | chr14_70361162_- | SINE | Alu | Name=AluJb |
| ADediting_1537579 | chr14_70361168_- | SINE | Alu | Name=AluJb |
| ADediting_1537580 | chr14_70361169_- | SINE | Alu | Name=AluJb |
| ADediting_1537581 | chr14_70361177_- | SINE | Alu | Name=AluJb |
| ADediting_1537582 | chr14_70361194_- | SINE | Alu | Name=AluJb |
| ADediting_1537583 | chr14_70361301_- | SINE | Alu | Name=AluJb |
| ADediting_1537584 | chr14_70361314_- | SINE | Alu | Name=AluJb |
| ADediting_1537585 | chr14_70361365_- | SINE | Alu | Name=AluJb |
| ADediting_1537586 | chr14_70361403_- | SINE | Alu | Name=AluJb |
| ADediting_1537587 | chr14_70361405_- | SINE | Alu | Name=AluJb |
| ADediting_1537588 | chr14_70361406_- | SINE | Alu | Name=AluJb |
| ADediting_1537589 | chr14_70362456_- | SINE | Alu | Name=AluSx |
| ADediting_1537590 | chr14_70362784_- | SINE | Alu | Name=FLAM_A |
| ADediting_1537591 | chr14_70362788_- | SINE | Alu | Name=FLAM_A |
| ADediting_1537592 | chr14_70362789_- | SINE | Alu | Name=FLAM_A |
| ADediting_1537593 | chr14_70362797_- | SINE | Alu | Name=FLAM_A |
| ADediting_1537594 | chr14_70362801_- | SINE | Alu | Name=FLAM_A |
| ADediting_1537595 | chr14_70362811_- | SINE | Alu | Name=FLAM_A |
| ADediting_1537596 | chr14_70362821_- | SINE | Alu | Name=FLAM_A |
| ADediting_1537597 | chr14_70362824_- | SINE | Alu | Name=FLAM_A |
| ADediting_1537598 | chr14_70362832_- | SINE | Alu | Name=FLAM_A |
| ADediting_1537599 | chr14_70363885_- | SINE | Alu | Name=FLAM_C |
| ADediting_1537600 | chr14_70363899_- | SINE | Alu | Name=FLAM_C |
| ADediting_1537601 | chr14_70363900_- | SINE | Alu | Name=FLAM_C |
| ADediting_1537602 | chr14_70363911_- | SINE | Alu | Name=FLAM_C |
| ADediting_1537603 | chr14_70363935_- | SINE | Alu | Name=FLAM_C |
| ADediting_1537604 | chr14_70363936_- | SINE | Alu | Name=FLAM_C |
| ADediting_1537605 | chr14_70369203_- | SINE | Alu | Name=AluJb |
| ADediting_1537606 | chr14_70371460_- | SINE | Alu | Name=AluSg |
| ADediting_1537607 | chr14_70371470_- | SINE | Alu | Name=AluSg |
| ADediting_1537608 | chr14_70371594_- | SINE | Alu | Name=AluSg |
| ADediting_1537609 | chr14_70371632_- | SINE | Alu | Name=AluSg |
| ADediting_1537610 | chr14_70381993_- | SINE | Alu | Name=AluY |
| ADediting_1620128 | chr14_70369199_- | SINE | Alu | Name=AluJb |
| ADediting_1620129 | chr14_70371512_- | SINE | Alu | Name=AluSg |
| ADediting_1620130 | chr14_70385676_- | SINE | Alu | Name=AluSz6 |
| ADediting_1620131 | chr14_70408901_- | SINE | Alu | Name=AluJr |
| ADediting_1620132 | chr14_70408945_- | SINE | Alu | Name=AluJr |
| ADediting_1620133 | chr14_70409165_- | SINE | Alu | Name=AluJr |
Top |
RNA A-to-I editing events in the alternative splicing sites for SYNJ2BP-COX16 |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
Top |
Differntial gene expression between RNA A-to-I edited versus non-edited samples for SYNJ2BP-COX16 |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
Top |
Protein coding region RNA A-to-I editings for SYNJ2BP-COX16 |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
Top |
The effects of the RNA editing to the miRNA binding sites for SYNJ2BP-COX16 |
| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| Differentially expressed gene-miRNA network |
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The effects of the RNA editing to the stability of the RNA structures for SYNJ2BP-COX16 |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for SYNJ2BP-COX16 |
| Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| CER | ADediting_1537575 | chr14_70361149_- | 0.0087280238573241 | 0.213440634966669 | 1.39364100237465e-07 | 0.413987172336346 | 0.00158165039196769 | 0.255787889282017 |
| CER | ADediting_1537577 | chr14_70361155_- | 0.0122650093130237 | 0.204036553649312 | 1.6096974874193e-07 | 0.412089778512682 | 0.0128379188585698 | 0.20274495433648 |
| CER | ADediting_1537581 | chr14_70361177_- | 0.00106890236586495 | 0.264572542669613 | 7.13986909155331e-10 | 0.476452440346734 | 0.00197606974983282 | 0.25065965273411 |
| CER | ADediting_1537584 | chr14_70361314_- | 0.010443168023904 | 0.208528996719875 | 5.89322834986006e-06 | 0.360395497446365 | 5.3362388659951e-06 | 0.361946660593768 |
| CER | ADediting_1537585 | chr14_70361365_- | 0.000285992426267862 | 0.292152890281924 | 2.8478281143354e-11 | 0.509221297696781 | 0.00109876930003896 | 0.26396432495427 |
| CER | ADediting_1537586 | chr14_70361403_- | 0.00327740395881294 | 0.238604774011233 | 8.48177061020085e-08 | 0.420436453262475 | 0.00147026012545946 | 0.257447930487024 |
| CER | ADediting_1537588 | chr14_70361406_- | 0.000564876240404218 | 0.278269640467207 | 4.62601295830488e-09 | 0.455729523125727 | 0.0040379653179756 | 0.23345756261599 |
| CER | ADediting_1537589 | chr14_70362456_- | 0.000862069257139719 | 0.269270856783644 | 1.88061944511008e-07 | 0.4100287010265 | 0.00669996160826739 | 0.220497890123311 |
| CER | ADediting_1537590 | chr14_70362784_- | 0.000373537874820495 | 0.286790214287078 | 4.70956954396639e-09 | 0.455524158890853 | 0.00548462198006873 | 0.225703879965078 |
| CER | ADediting_1537591 | chr14_70362788_- | 0.00122141174366729 | 0.261615664917315 | 2.90483593262641e-09 | 0.461020642555914 | 0.004005815738594 | 0.233656715314332 |
| CER | ADediting_1537592 | chr14_70362789_- | 0.00247183246978359 | 0.24539719998155 | 1.4148802026296e-09 | 0.469026865831202 | 0.0041917010258783 | 0.232524494279582 |
| CER | ADediting_1537593 | chr14_70362797_- | 0.000949246675141265 | 0.267176630246592 | 2.15806260529412e-09 | 0.464353166729208 | 0.00355305158129306 | 0.23662569157859 |
| CER | ADediting_1537594 | chr14_70362801_- | 0.00224504230968575 | 0.247673007517125 | 2.77294521914328e-07 | 0.404822446534317 | 0.089092445257009 | 0.139308754639653 |
| CER | ADediting_1537595 | chr14_70362811_- | 0.000135526381523624 | 0.306616582088909 | 1.1873970067073e-10 | 0.495125055550955 | 4.75779868486509e-05 | 0.325709775271285 |
| CER | ADediting_1537596 | chr14_70362821_- | 0.00496051097775186 | 0.228274514415465 | 2.15227634177924e-06 | 0.375770948182982 | 0.00179978566106707 | 0.252824511220434 |
| CER | ADediting_1537597 | chr14_70362824_- | 0.000949467585430573 | 0.267171551338894 | 1.18262577653129e-08 | 0.44477406066736 | 4.80503390960721e-05 | 0.325535452021914 |
| CER | ADediting_1537598 | chr14_70362832_- | 0.00512610235008177 | 0.227437091075862 | 7.74760403843561e-07 | 0.390603127374186 | 0.00141462737083732 | 0.258320444170981 |
| CER | ADediting_1537600 | chr14_70363899_- | 0.0052323509960103 | 0.22691243113972 | 7.18783839864226e-12 | 0.52222880508805 | 0.00698709429207382 | 0.219391921772328 |
| CER | ADediting_1537601 | chr14_70363900_- | 0.0113922139317852 | 0.206109797112759 | 5.03738036837559e-06 | 0.362843431647943 | 0.00456667846214185 | 0.230371447796235 |
| CER | ADediting_1537603 | chr14_70363935_- | 0.00154290439017858 | 0.256352873273463 | 1.13817314290891e-06 | 0.385104597358815 | 0.00305579790920664 | 0.240307865137933 |
| CER | ADediting_1537604 | chr14_70363936_- | 0.00569684067440425 | 0.224725078827517 | 8.12913059391371e-07 | 0.38992134683424 | 0.00421072994696819 | 0.232411147979477 |
| CER | ADediting_443937 | chr14_70360053_- | 0.360305785682093 | 0.0752150225651264 | 3.71337855175279e-05 | 0.330048872580712 | 0.000167060571008165 | 0.302640629824137 |
| CER | ADediting_443938 | chr14_70360174_- | 0.236364723688707 | 0.0972674146244593 | 1.67205305169213e-05 | 0.343591178629341 | 0.00236105388570749 | 0.246484076580847 |
| CER | ADediting_443940 | chr14_70362528_- | 0.00015585361959385 | 0.303966721250872 | 1.30540002047785e-12 | 0.537615103085372 | 0.000141191835254538 | 0.305842659427616 |
| CER | ADediting_443942 | chr14_70363846_- | 0.000278244825825668 | 0.292698461275184 | 8.58488850761868e-11 | 0.498384163520318 | 0.000632407892267776 | 0.275895362513249 |
| CER | ADediting_443943 | chr14_70364179_- | 0.0178244547676105 | 0.193237575634579 | 6.27731810957267e-06 | 0.359404806765345 | 0.248567937855904 | 0.0947908790601378 |
| CER | ADediting_443945 | chr14_70364231_- | 0.00219994832103136 | 0.24815023817164 | 6.22319209259405e-09 | 0.452309398504327 | 0.00227270789168053 | 0.247384507378123 |
| Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 4.97082123129254e-33 | 0.61036987469233 | 4.30447109946716e-30 | 0.586977460102306 | 0.246642933717149 | 0.0659956107621311 |
| AC | 1.01917034651481e-34 | 0.675863385679316 | 2.45542103591064e-26 | 0.604868361919084 | 2.19202098781698e-07 | 0.320666472863697 |
| PCC | 5.38223248518234e-19 | 0.585935275872643 | 3.26135112416279e-21 | 0.614456487277745 | 0.219264790789679 | 0.0892985705665764 |
| CER | 1.21102283036995e-06 | 0.384208257188925 | 4.08583153538112e-06 | 0.366078458152753 | 0.0029002278237857 | 0.241571392155583 |
| TCX | 3.29841429821334e-08 | 0.432342589645341 | 1.01749989527259e-05 | 0.351714702081434 | 0.147060611540627 | -0.11896572570305 |
| FP | 0.000122521110847051 | 0.283949000028185 | 9.71340326698134e-07 | 0.357393755679124 | 0.507870626074329 | -0.0499516909646558 |
| IFG | 0.00872376411399641 | 0.51304860298279 | 0.0264920423690386 | 0.443198783866625 | 0.836808266402957 | 0.0433980447811656 |
| STG | 0.000524080464912615 | 0.370400777397071 | 5.40931350501749e-07 | 0.514913225841482 | 0.624933611226881 | -0.0541118056607143 |
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Relation with AD stages for SYNJ2BP-COX16 |
| Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| CER | ADediting_443940 | chr14_70362528_- | 0.00141490671105196 | 0.303369799150455 |
| CER | ADediting_443942 | chr14_70363846_- | 0.000853781327963813 | 0.316286996156375 |
| CER | ADediting_1537581 | chr14_70361177_- | 0.000675945749334274 | 0.322070611081765 |
| CER | ADediting_1537585 | chr14_70361365_- | 0.000172318916298359 | 0.353819383428617 |
| CER | ADediting_1537586 | chr14_70361403_- | 0.000532121720230122 | 0.327878822767665 |
| CER | ADediting_1537595 | chr14_70362811_- | 0.00148127152074744 | 0.302168502692161 |
| Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
| PG | 1.01998222683062e-05 | -0.317306797197665 |
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RelatedDrugs for SYNJ2BP-COX16 |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for SYNJ2BP-COX16 |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
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