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| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for DNAJB6 |
 Gene summary |
| Gene information | Gene symbol | DNAJB6 | Gene ID | 10049 |
| Gene name | DnaJ heat shock protein family (Hsp40) member B6 | |
| Synonyms | DJ4|DnaJ|HHDJ1|HSJ-2|HSJ2|LGMD1D|LGMD1E|LGMDD1|MRJ|MSJ-1 | |
| Cytomap | 7q36.3 | |
| Type of gene | protein-coding | |
| Description | dnaJ homolog subfamily B member 6DnaJ (Hsp40) homolog, subfamily B, member 6DnaJ-like 2 proteinheat shock protein J2 | |
| Modification date | 20200328 | |
| UniProtAcc | O75190, | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
| DNAJB6 | GO:0006457 | protein folding | 11896048 |
| DNAJB6 | GO:0043154 | negative regulation of cysteine-type endopeptidase activity involved in apoptotic process | 11896048 |
| DNAJB6 | GO:0045109 | intermediate filament organization | 10954706 |
| DNAJB6 | GO:0090084 | negative regulation of inclusion body assembly | 21231916 |
Top |
RNA A-to-I events for DNAJB6 |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA editing frequencies across three data sets. |
 |
| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
 |
| RNA A-to-I editing events in AD. |
| ADediting_1320437(157341953, +), ADediting_1320438(157342001, +), ADediting_1320439(157342024, +), ADediting_1320440(157342050, +), ADediting_1320441(157342280, +), ADediting_1320442(157342431, +), ADediting_1320443(157342503, +), ADediting_1320444(157342517, +), ADediting_1320445(157342646, +), ADediting_1320446(157343340, +), ADediting_1320447(157343629, +), ADediting_1320448(157344079, +), ADediting_1320449(157344107, +), ADediting_1320450(157344123, +), ADediting_1320451(157344188, +), ADediting_1320452(157344189, +), ADediting_1320453(157344194, +), ADediting_1320454(157344220, +), ADediting_1320455(157344230, +), ADediting_1320456(157344237, +), ADediting_1320457(157344247, +), ADediting_1320458(157344262, +), ADediting_1320459(157344392, +), ADediting_1320460(157344437, +), ADediting_1320461(157344865, +), ADediting_1320462(157345017, +), ADediting_1320463(157345050, +), ADediting_1320464(157345123, +), ADediting_1320465(157345183, +), ADediting_1320466(157345246, +), ADediting_1320467(157346936, +), ADediting_1320468(157350783, +), ADediting_1320469(157350999, +), ADediting_1320470(157351028, +), ADediting_1320471(157351034, +), ADediting_1320472(157351052, +), ADediting_1320473(157351074, +), ADediting_1320474(157351096, +), ADediting_1320475(157351117, +), ADediting_1320476(157351450, +), ADediting_1320477(157351451, +), ADediting_1320478(157351452, +), ADediting_1320479(157351490, +), ADediting_1320480(157351512, +), ADediting_1320481(157351518, +), ADediting_1320482(157351526, +), ADediting_1320483(157351905, +), ADediting_1320484(157352076, +), ADediting_1320485(157352090, +), ADediting_1320486(157352120, +), ADediting_1320487(157352143, +), ADediting_1320488(157352144, +), ADediting_1320489(157352169, +), ADediting_1320490(157352186, +), ADediting_1320491(157352209, +), ADediting_1320492(157352239, +), ADediting_1320493(157357491, +), ADediting_1320494(157357573, +), ADediting_1320495(157359473, +), ADediting_1320496(157368018, +), ADediting_1320497(157372960, +), ADediting_1320498(157372998, +), ADediting_1320499(157373005, +), ADediting_1320500(157373374, +), ADediting_1320501(157373390, +), ADediting_1320502(157373412, +), ADediting_1320503(157373414, +), ADediting_1320504(157373420, +), ADediting_1320505(157373444, +), ADediting_1320506(157373468, +), ADediting_1320507(157373477, +), ADediting_1320508(157373480, +), ADediting_1320509(157373496, +), ADediting_1320510(157373500, +), ADediting_1320511(157373531, +), ADediting_1320512(157373534, +), ADediting_1320513(157373548, +), ADediting_1320514(157373551, +), ADediting_1320515(157373565, +), ADediting_1320516(157373625, +), ADediting_1320517(157373904, +), ADediting_1320518(157373926, +), ADediting_1320519(157373953, +), ADediting_1320520(157373971, +), ADediting_1320521(157374292, +), ADediting_1320522(157374360, +), ADediting_1320523(157374399, +), ADediting_1320524(157374481, +), ADediting_1320525(157374506, +), ADediting_1320526(157376625, +), ADediting_1320527(157376626, +), ADediting_1320528(157376671, +), ADediting_1320529(157376685, +), ADediting_1320530(157376694, +), ADediting_1320531(157376695, +), ADediting_1320532(157376705, +), ADediting_1320533(157376710, +), ADediting_1320534(157376716, +), ADediting_1320535(157376722, +), ADediting_1320536(157376723, +), ADediting_1320537(157376726, +), ADediting_1320538(157376734, +), ADediting_1320539(157376750, +), ADediting_1320540(157376754, +), ADediting_1320541(157376760, +), ADediting_1320542(157376761, +), ADediting_1320543(157376770, +), ADediting_1320544(157376787, +), ADediting_1320545(157376812, +), ADediting_1320546(157376829, +), ADediting_1320547(157376830, +), ADediting_1320548(157376843, +), ADediting_1320549(157379556, +), ADediting_1320550(157379881, +), ADediting_1320551(157379898, +), ADediting_1320552(157379912, +), ADediting_1320553(157379916, +), ADediting_1320554(157379951, +), ADediting_1320555(157379994, +), ADediting_1320556(157379997, +), ADediting_1320557(157379999, +), ADediting_1320558(157380034, +), ADediting_1320559(157380035, +), ADediting_1320560(157380049, +), ADediting_1320561(157381022, +), ADediting_1320562(157381023, +), ADediting_1320563(157381071, +), ADediting_1320564(157383188, +), ADediting_1320565(157384082, +), ADediting_1320566(157384158, +), ADediting_1320567(157384521, +), ADediting_1320568(157386737, +), ADediting_1320569(157386753, +), ADediting_1320570(157387949, +), ADediting_1320571(157388026, +), ADediting_1320572(157388081, +), ADediting_1320573(157390889, +), ADediting_1320574(157390905, +), ADediting_1320575(157390960, +), ADediting_1320576(157391016, +), ADediting_1320577(157391045, +), ADediting_1320578(157391846, +), ADediting_1320579(157391847, +), ADediting_1320580(157391917, +), ADediting_1320581(157391927, +), ADediting_1320582(157391956, +), ADediting_1320583(157391982, +), ADediting_1320584(157391992, +), ADediting_1320585(157391996, +), ADediting_1320586(157394992, +), ADediting_1320587(157396081, +), ADediting_1320588(157397928, +), ADediting_1586628(157340808, +), ADediting_1586629(157341966, +), ADediting_1586630(157341984, +), ADediting_1586631(157341996, +), ADediting_1586632(157342261, +), ADediting_1586633(157342437, +), ADediting_1586634(157342526, +), ADediting_1586635(157342584, +), ADediting_1586636(157342657, +), ADediting_1586637(157343085, +), ADediting_1586638(157343179, +), ADediting_1586639(157343184, +), ADediting_1586640(157343253, +), ADediting_1586641(157343260, +), ADediting_1586642(157343299, +), ADediting_1586643(157343729, +), ADediting_1586644(157344086, +), ADediting_1586645(157344168, +), ADediting_1586646(157344177, +), ADediting_1586647(157344187, +), ADediting_1586648(157344190, +), ADediting_1586649(157344261, +), ADediting_1586650(157344419, +), ADediting_1586651(157344434, +), ADediting_1586652(157344454, +), ADediting_1586653(157344802, +), ADediting_1586654(157344803, +), ADediting_1586655(157344881, +), ADediting_1586656(157344893, +), ADediting_1586657(157345018, +), ADediting_1586658(157345094, +), ADediting_1586659(157345151, +), ADediting_1586660(157345194, +), ADediting_1586661(157349848, +), ADediting_1586662(157351123, +), ADediting_1586663(157351559, +), ADediting_1586664(157351578, +), ADediting_1586665(157351730, +), ADediting_1586666(157351914, +), ADediting_1586667(157352168, +), ADediting_1586668(157352250, +), ADediting_1586669(157359705, +), ADediting_1586670(157359760, +), ADediting_1586671(157362468, +), ADediting_1586672(157362879, +), ADediting_1586673(157367704, +), ADediting_1586674(157373406, +), ADediting_1586675(157373908, +), ADediting_1586676(157374377, +), ADediting_1586677(157374389, +), ADediting_1586678(157376680, +), ADediting_1586679(157376729, +), ADediting_1586680(157379587, +), ADediting_1586681(157379961, +), ADediting_1586682(157380079, +), ADediting_1586683(157383124, +), ADediting_1586684(157383172, +), |
Top |
RNA editing positional annotations for DNAJB6 using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_1320437 | chr7_157341953_+ | intronic |
| ADediting_1320438 | chr7_157342001_+ | intronic |
| ADediting_1320439 | chr7_157342024_+ | intronic |
| ADediting_1320440 | chr7_157342050_+ | intronic |
| ADediting_1320441 | chr7_157342280_+ | intronic |
| ADediting_1320442 | chr7_157342431_+ | intronic |
| ADediting_1320443 | chr7_157342503_+ | intronic |
| ADediting_1320444 | chr7_157342517_+ | intronic |
| ADediting_1320445 | chr7_157342646_+ | intronic |
| ADediting_1320446 | chr7_157343340_+ | intronic |
| ADediting_1320447 | chr7_157343629_+ | intronic |
| ADediting_1320448 | chr7_157344079_+ | intronic |
| ADediting_1320449 | chr7_157344107_+ | intronic |
| ADediting_1320450 | chr7_157344123_+ | intronic |
| ADediting_1320451 | chr7_157344188_+ | intronic |
| ADediting_1320452 | chr7_157344189_+ | intronic |
| ADediting_1320453 | chr7_157344194_+ | intronic |
| ADediting_1320454 | chr7_157344220_+ | intronic |
| ADediting_1320455 | chr7_157344230_+ | intronic |
| ADediting_1320456 | chr7_157344237_+ | intronic |
| ADediting_1320457 | chr7_157344247_+ | intronic |
| ADediting_1320458 | chr7_157344262_+ | intronic |
| ADediting_1320459 | chr7_157344392_+ | intronic |
| ADediting_1320460 | chr7_157344437_+ | intronic |
| ADediting_1320461 | chr7_157344865_+ | intronic |
| ADediting_1320462 | chr7_157345017_+ | intronic |
| ADediting_1320463 | chr7_157345050_+ | intronic |
| ADediting_1320464 | chr7_157345123_+ | intronic |
| ADediting_1320465 | chr7_157345183_+ | intronic |
| ADediting_1320466 | chr7_157345246_+ | intronic |
| ADediting_1320467 | chr7_157346936_+ | intronic |
| ADediting_1320468 | chr7_157350783_+ | intronic |
| ADediting_1320469 | chr7_157350999_+ | intronic |
| ADediting_1320470 | chr7_157351028_+ | intronic |
| ADediting_1320471 | chr7_157351034_+ | intronic |
| ADediting_1320472 | chr7_157351052_+ | intronic |
| ADediting_1320473 | chr7_157351074_+ | intronic |
| ADediting_1320474 | chr7_157351096_+ | intronic |
| ADediting_1320475 | chr7_157351117_+ | intronic |
| ADediting_1320476 | chr7_157351450_+ | intronic |
| ADediting_1320477 | chr7_157351451_+ | intronic |
| ADediting_1320478 | chr7_157351452_+ | intronic |
| ADediting_1320479 | chr7_157351490_+ | intronic |
| ADediting_1320480 | chr7_157351512_+ | intronic |
| ADediting_1320481 | chr7_157351518_+ | intronic |
| ADediting_1320482 | chr7_157351526_+ | intronic |
| ADediting_1320483 | chr7_157351905_+ | intronic |
| ADediting_1320484 | chr7_157352076_+ | intronic |
| ADediting_1320485 | chr7_157352090_+ | intronic |
| ADediting_1320486 | chr7_157352120_+ | intronic |
| ADediting_1320487 | chr7_157352143_+ | intronic |
| ADediting_1320488 | chr7_157352144_+ | intronic |
| ADediting_1320489 | chr7_157352169_+ | intronic |
| ADediting_1320490 | chr7_157352186_+ | intronic |
| ADediting_1320491 | chr7_157352209_+ | intronic |
| ADediting_1320492 | chr7_157352239_+ | intronic |
| ADediting_1320493 | chr7_157357491_+ | intronic |
| ADediting_1320494 | chr7_157357573_+ | intronic |
| ADediting_1320495 | chr7_157359473_+ | intronic |
| ADediting_1320496 | chr7_157368018_+ | intronic |
| ADediting_1320497 | chr7_157372960_+ | intronic |
| ADediting_1320498 | chr7_157372998_+ | intronic |
| ADediting_1320499 | chr7_157373005_+ | intronic |
| ADediting_1320500 | chr7_157373374_+ | intronic |
| ADediting_1320501 | chr7_157373390_+ | intronic |
| ADediting_1320502 | chr7_157373412_+ | intronic |
| ADediting_1320503 | chr7_157373414_+ | intronic |
| ADediting_1320504 | chr7_157373420_+ | intronic |
| ADediting_1320505 | chr7_157373444_+ | intronic |
| ADediting_1320506 | chr7_157373468_+ | intronic |
| ADediting_1320507 | chr7_157373477_+ | intronic |
| ADediting_1320508 | chr7_157373480_+ | intronic |
| ADediting_1320509 | chr7_157373496_+ | intronic |
| ADediting_1320510 | chr7_157373500_+ | intronic |
| ADediting_1320511 | chr7_157373531_+ | intronic |
| ADediting_1320512 | chr7_157373534_+ | intronic |
| ADediting_1320513 | chr7_157373548_+ | intronic |
| ADediting_1320514 | chr7_157373551_+ | intronic |
| ADediting_1320515 | chr7_157373565_+ | intronic |
| ADediting_1320516 | chr7_157373625_+ | intronic |
| ADediting_1320517 | chr7_157373904_+ | intronic |
| ADediting_1320518 | chr7_157373926_+ | intronic |
| ADediting_1320519 | chr7_157373953_+ | intronic |
| ADediting_1320520 | chr7_157373971_+ | intronic |
| ADediting_1320521 | chr7_157374292_+ | intronic |
| ADediting_1320522 | chr7_157374360_+ | intronic |
| ADediting_1320523 | chr7_157374399_+ | intronic |
| ADediting_1320524 | chr7_157374481_+ | intronic |
| ADediting_1320525 | chr7_157374506_+ | intronic |
| ADediting_1320526 | chr7_157376625_+ | intronic |
| ADediting_1320527 | chr7_157376626_+ | intronic |
| ADediting_1320528 | chr7_157376671_+ | intronic |
| ADediting_1320529 | chr7_157376685_+ | intronic |
| ADediting_1320530 | chr7_157376694_+ | intronic |
| ADediting_1320531 | chr7_157376695_+ | intronic |
| ADediting_1320532 | chr7_157376705_+ | intronic |
| ADediting_1320533 | chr7_157376710_+ | intronic |
| ADediting_1320534 | chr7_157376716_+ | intronic |
| ADediting_1320535 | chr7_157376722_+ | intronic |
| ADediting_1320536 | chr7_157376723_+ | intronic |
| ADediting_1320537 | chr7_157376726_+ | intronic |
| ADediting_1320538 | chr7_157376734_+ | intronic |
| ADediting_1320539 | chr7_157376750_+ | intronic |
| ADediting_1320540 | chr7_157376754_+ | intronic |
| ADediting_1320541 | chr7_157376760_+ | intronic |
| ADediting_1320542 | chr7_157376761_+ | intronic |
| ADediting_1320543 | chr7_157376770_+ | intronic |
| ADediting_1320544 | chr7_157376787_+ | intronic |
| ADediting_1320545 | chr7_157376812_+ | intronic |
| ADediting_1320546 | chr7_157376829_+ | intronic |
| ADediting_1320547 | chr7_157376830_+ | intronic |
| ADediting_1320548 | chr7_157376843_+ | intronic |
| ADediting_1320549 | chr7_157379556_+ | intronic |
| ADediting_1320550 | chr7_157379881_+ | intronic |
| ADediting_1320551 | chr7_157379898_+ | intronic |
| ADediting_1320552 | chr7_157379912_+ | intronic |
| ADediting_1320553 | chr7_157379916_+ | intronic |
| ADediting_1320554 | chr7_157379951_+ | intronic |
| ADediting_1320555 | chr7_157379994_+ | intronic |
| ADediting_1320556 | chr7_157379997_+ | intronic |
| ADediting_1320557 | chr7_157379999_+ | intronic |
| ADediting_1320558 | chr7_157380034_+ | intronic |
| ADediting_1320559 | chr7_157380035_+ | intronic |
| ADediting_1320560 | chr7_157380049_+ | intronic |
| ADediting_1320561 | chr7_157381022_+ | intronic |
| ADediting_1320562 | chr7_157381023_+ | intronic |
| ADediting_1320563 | chr7_157381071_+ | intronic |
| ADediting_1320564 | chr7_157383188_+ | intronic |
| ADediting_1320565 | chr7_157384082_+ | intronic |
| ADediting_1320566 | chr7_157384158_+ | intronic |
| ADediting_1320567 | chr7_157384521_+ | intronic |
| ADediting_1320568 | chr7_157386737_+ | intronic |
| ADediting_1320569 | chr7_157386753_+ | intronic |
| ADediting_1320570 | chr7_157387949_+ | intronic |
| ADediting_1320571 | chr7_157388026_+ | intronic |
| ADediting_1320572 | chr7_157388081_+ | intronic |
| ADediting_1320573 | chr7_157390889_+ | intronic |
| ADediting_1320574 | chr7_157390905_+ | intronic |
| ADediting_1320575 | chr7_157390960_+ | intronic |
| ADediting_1320576 | chr7_157391016_+ | intronic |
| ADediting_1320577 | chr7_157391045_+ | intronic |
| ADediting_1320578 | chr7_157391846_+ | intronic |
| ADediting_1320579 | chr7_157391847_+ | intronic |
| ADediting_1320580 | chr7_157391917_+ | intronic |
| ADediting_1320581 | chr7_157391927_+ | intronic |
| ADediting_1320582 | chr7_157391956_+ | intronic |
| ADediting_1320583 | chr7_157391982_+ | intronic |
| ADediting_1320584 | chr7_157391992_+ | intronic |
| ADediting_1320585 | chr7_157391996_+ | intronic |
| ADediting_1320586 | chr7_157394992_+ | intronic |
| ADediting_1320587 | chr7_157396081_+ | intronic |
| ADediting_1320588 | chr7_157397928_+ | intronic |
| ADediting_1586628 | chr7_157340808_+ | intronic |
| ADediting_1586629 | chr7_157341966_+ | intronic |
| ADediting_1586630 | chr7_157341984_+ | intronic |
| ADediting_1586631 | chr7_157341996_+ | intronic |
| ADediting_1586632 | chr7_157342261_+ | intronic |
| ADediting_1586633 | chr7_157342437_+ | intronic |
| ADediting_1586634 | chr7_157342526_+ | intronic |
| ADediting_1586635 | chr7_157342584_+ | intronic |
| ADediting_1586636 | chr7_157342657_+ | intronic |
| ADediting_1586637 | chr7_157343085_+ | intronic |
| ADediting_1586638 | chr7_157343179_+ | intronic |
| ADediting_1586639 | chr7_157343184_+ | intronic |
| ADediting_1586640 | chr7_157343253_+ | intronic |
| ADediting_1586641 | chr7_157343260_+ | intronic |
| ADediting_1586642 | chr7_157343299_+ | intronic |
| ADediting_1586643 | chr7_157343729_+ | intronic |
| ADediting_1586644 | chr7_157344086_+ | intronic |
| ADediting_1586645 | chr7_157344168_+ | intronic |
| ADediting_1586646 | chr7_157344177_+ | intronic |
| ADediting_1586647 | chr7_157344187_+ | intronic |
| ADediting_1586648 | chr7_157344190_+ | intronic |
| ADediting_1586649 | chr7_157344261_+ | intronic |
| ADediting_1586650 | chr7_157344419_+ | intronic |
| ADediting_1586651 | chr7_157344434_+ | intronic |
| ADediting_1586652 | chr7_157344454_+ | intronic |
| ADediting_1586653 | chr7_157344802_+ | intronic |
| ADediting_1586654 | chr7_157344803_+ | intronic |
| ADediting_1586655 | chr7_157344881_+ | intronic |
| ADediting_1586656 | chr7_157344893_+ | intronic |
| ADediting_1586657 | chr7_157345018_+ | intronic |
| ADediting_1586658 | chr7_157345094_+ | intronic |
| ADediting_1586659 | chr7_157345151_+ | intronic |
| ADediting_1586660 | chr7_157345194_+ | intronic |
| ADediting_1586661 | chr7_157349848_+ | intronic |
| ADediting_1586662 | chr7_157351123_+ | intronic |
| ADediting_1586663 | chr7_157351559_+ | intronic |
| ADediting_1586664 | chr7_157351578_+ | intronic |
| ADediting_1586665 | chr7_157351730_+ | intronic |
| ADediting_1586666 | chr7_157351914_+ | intronic |
| ADediting_1586667 | chr7_157352168_+ | intronic |
| ADediting_1586668 | chr7_157352250_+ | intronic |
| ADediting_1586669 | chr7_157359705_+ | intronic |
| ADediting_1586670 | chr7_157359760_+ | intronic |
| ADediting_1586671 | chr7_157362468_+ | intronic |
| ADediting_1586672 | chr7_157362879_+ | intronic |
| ADediting_1586673 | chr7_157367704_+ | intronic |
| ADediting_1586674 | chr7_157373406_+ | intronic |
| ADediting_1586675 | chr7_157373908_+ | intronic |
| ADediting_1586676 | chr7_157374377_+ | intronic |
| ADediting_1586677 | chr7_157374389_+ | intronic |
| ADediting_1586678 | chr7_157376680_+ | intronic |
| ADediting_1586679 | chr7_157376729_+ | intronic |
| ADediting_1586680 | chr7_157379587_+ | intronic |
| ADediting_1586681 | chr7_157379961_+ | intronic |
| ADediting_1586682 | chr7_157380079_+ | intronic |
| ADediting_1586683 | chr7_157383124_+ | intronic |
| ADediting_1586684 | chr7_157383172_+ | intronic |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_1320437 | chr7_157341953_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1320438 | chr7_157342001_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1320439 | chr7_157342024_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1320440 | chr7_157342050_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1320441 | chr7_157342280_+ | SINE | Alu | Name=AluSx |
| ADediting_1320442 | chr7_157342431_+ | SINE | Alu | Name=AluSq |
| ADediting_1320443 | chr7_157342503_+ | SINE | Alu | Name=AluSq |
| ADediting_1320444 | chr7_157342517_+ | SINE | Alu | Name=AluSq |
| ADediting_1320445 | chr7_157342646_+ | SINE | Alu | Name=AluSx |
| ADediting_1320446 | chr7_157343340_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1320447 | chr7_157343629_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1320448 | chr7_157344079_+ | SINE | Alu | Name=AluY |
| ADediting_1320449 | chr7_157344107_+ | SINE | Alu | Name=AluY |
| ADediting_1320450 | chr7_157344123_+ | SINE | Alu | Name=AluY |
| ADediting_1320451 | chr7_157344188_+ | SINE | Alu | Name=AluY |
| ADediting_1320452 | chr7_157344189_+ | SINE | Alu | Name=AluY |
| ADediting_1320453 | chr7_157344194_+ | SINE | Alu | Name=AluY |
| ADediting_1320454 | chr7_157344220_+ | SINE | Alu | Name=AluY |
| ADediting_1320455 | chr7_157344230_+ | SINE | Alu | Name=AluY |
| ADediting_1320456 | chr7_157344237_+ | SINE | Alu | Name=AluY |
| ADediting_1320457 | chr7_157344247_+ | SINE | Alu | Name=AluY |
| ADediting_1320458 | chr7_157344262_+ | SINE | Alu | Name=AluY |
| ADediting_1320459 | chr7_157344392_+ | SINE | Alu | Name=AluSc8 |
| ADediting_1320460 | chr7_157344437_+ | SINE | Alu | Name=AluSc8 |
| ADediting_1320461 | chr7_157344865_+ | SINE | Alu | Name=AluJb |
| ADediting_1320462 | chr7_157345017_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1320463 | chr7_157345050_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1320464 | chr7_157345123_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1320465 | chr7_157345183_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1320466 | chr7_157345246_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1320467 | chr7_157346936_+ | SINE | Alu | Name=AluY |
| ADediting_1320468 | chr7_157350783_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1320469 | chr7_157350999_+ | SINE | Alu | Name=AluSp |
| ADediting_1320470 | chr7_157351028_+ | SINE | Alu | Name=AluSp |
| ADediting_1320471 | chr7_157351034_+ | SINE | Alu | Name=AluSp |
| ADediting_1320472 | chr7_157351052_+ | SINE | Alu | Name=AluSp |
| ADediting_1320473 | chr7_157351074_+ | SINE | Alu | Name=AluSp |
| ADediting_1320474 | chr7_157351096_+ | SINE | Alu | Name=AluSp |
| ADediting_1320475 | chr7_157351117_+ | SINE | Alu | Name=AluSp |
| ADediting_1320476 | chr7_157351450_+ | SINE | Alu | Name=AluY |
| ADediting_1320477 | chr7_157351451_+ | SINE | Alu | Name=AluY |
| ADediting_1320478 | chr7_157351452_+ | SINE | Alu | Name=AluY |
| ADediting_1320479 | chr7_157351490_+ | SINE | Alu | Name=AluY |
| ADediting_1320480 | chr7_157351512_+ | SINE | Alu | Name=AluY |
| ADediting_1320481 | chr7_157351518_+ | SINE | Alu | Name=AluY |
| ADediting_1320482 | chr7_157351526_+ | SINE | Alu | Name=AluY |
| ADediting_1320483 | chr7_157351905_+ | SINE | Alu | Name=AluSx |
| ADediting_1320484 | chr7_157352076_+ | SINE | Alu | Name=AluSc5 |
| ADediting_1320485 | chr7_157352090_+ | SINE | Alu | Name=AluSc5 |
| ADediting_1320486 | chr7_157352120_+ | SINE | Alu | Name=AluSc5 |
| ADediting_1320487 | chr7_157352143_+ | SINE | Alu | Name=AluSc5 |
| ADediting_1320488 | chr7_157352144_+ | SINE | Alu | Name=AluSc5 |
| ADediting_1320489 | chr7_157352169_+ | SINE | Alu | Name=AluSc5 |
| ADediting_1320490 | chr7_157352186_+ | SINE | Alu | Name=AluSc5 |
| ADediting_1320491 | chr7_157352209_+ | SINE | Alu | Name=AluSc5 |
| ADediting_1320492 | chr7_157352239_+ | SINE | Alu | Name=AluSc5 |
| ADediting_1320493 | chr7_157357491_+ | SINE | Alu | Name=AluSz |
| ADediting_1320494 | chr7_157357573_+ | SINE | Alu | Name=AluSz |
| ADediting_1320495 | chr7_157359473_+ | SINE | Alu | Name=AluJr4 |
| ADediting_1320496 | chr7_157368018_+ | SINE | Alu | Name=AluJb |
| ADediting_1320497 | chr7_157372960_+ | SINE | Alu | Name=FLAM_A |
| ADediting_1320498 | chr7_157372998_+ | SINE | Alu | Name=FLAM_A |
| ADediting_1320499 | chr7_157373005_+ | SINE | Alu | Name=FLAM_A |
| ADediting_1320500 | chr7_157373374_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1320501 | chr7_157373390_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1320502 | chr7_157373412_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1320503 | chr7_157373414_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1320504 | chr7_157373420_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1320505 | chr7_157373444_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1320506 | chr7_157373468_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1320507 | chr7_157373477_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1320508 | chr7_157373480_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1320509 | chr7_157373496_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1320510 | chr7_157373500_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1320511 | chr7_157373531_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1320512 | chr7_157373534_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1320513 | chr7_157373548_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1320514 | chr7_157373551_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1320515 | chr7_157373565_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1320516 | chr7_157373625_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1320517 | chr7_157373904_+ | SINE | Alu | Name=FLAM_A |
| ADediting_1320518 | chr7_157373926_+ | SINE | Alu | Name=FLAM_A |
| ADediting_1320519 | chr7_157373953_+ | SINE | Alu | Name=FLAM_A |
| ADediting_1320520 | chr7_157373971_+ | SINE | Alu | Name=FLAM_A |
| ADediting_1320521 | chr7_157374292_+ | SINE | Alu | Name=AluSx |
| ADediting_1320522 | chr7_157374360_+ | SINE | Alu | Name=AluSx |
| ADediting_1320523 | chr7_157374399_+ | SINE | Alu | Name=AluSx |
| ADediting_1320524 | chr7_157374481_+ | SINE | Alu | Name=AluSx |
| ADediting_1320525 | chr7_157374506_+ | SINE | Alu | Name=AluSx |
| ADediting_1320526 | chr7_157376625_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1320527 | chr7_157376626_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1320528 | chr7_157376671_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1320529 | chr7_157376685_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1320530 | chr7_157376694_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1320531 | chr7_157376695_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1320532 | chr7_157376705_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1320533 | chr7_157376710_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1320534 | chr7_157376716_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1320535 | chr7_157376722_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1320536 | chr7_157376723_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1320537 | chr7_157376726_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1320538 | chr7_157376734_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1320539 | chr7_157376750_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1320540 | chr7_157376754_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1320541 | chr7_157376760_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1320542 | chr7_157376761_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1320543 | chr7_157376770_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1320544 | chr7_157376787_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1320545 | chr7_157376812_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1320546 | chr7_157376829_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1320547 | chr7_157376830_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1320548 | chr7_157376843_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1320549 | chr7_157379556_+ | SINE | Alu | Name=AluJr |
| ADediting_1320550 | chr7_157379881_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1320551 | chr7_157379898_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1320552 | chr7_157379912_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1320553 | chr7_157379916_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1320554 | chr7_157379951_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1320555 | chr7_157379994_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1320556 | chr7_157379997_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1320557 | chr7_157379999_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1320558 | chr7_157380034_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1320559 | chr7_157380035_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1320560 | chr7_157380049_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1320561 | chr7_157381022_+ | SINE | Alu | Name=FLAM_A,SVA_E |
| ADediting_1320562 | chr7_157381023_+ | Retroposon | SVA | Name=SVA_E,FLAM_A |
| ADediting_1320563 | chr7_157381071_+ | SINE | Alu | Name=FLAM_A,SVA_E |
| ADediting_1320564 | chr7_157383188_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1320568 | chr7_157386737_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1320569 | chr7_157386753_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1320570 | chr7_157387949_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1320571 | chr7_157388026_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1320572 | chr7_157388081_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1320573 | chr7_157390889_+ | SINE | Alu | Name=AluJo |
| ADediting_1320574 | chr7_157390905_+ | SINE | Alu | Name=AluJo |
| ADediting_1320575 | chr7_157390960_+ | SINE | Alu | Name=AluJo |
| ADediting_1320576 | chr7_157391016_+ | SINE | Alu | Name=AluJo |
| ADediting_1320577 | chr7_157391045_+ | SINE | Alu | Name=AluJo |
| ADediting_1320578 | chr7_157391846_+ | SINE | Alu | Name=AluJb |
| ADediting_1320579 | chr7_157391847_+ | SINE | Alu | Name=AluJb |
| ADediting_1320580 | chr7_157391917_+ | SINE | Alu | Name=AluJb |
| ADediting_1320581 | chr7_157391927_+ | SINE | Alu | Name=AluJb |
| ADediting_1320582 | chr7_157391956_+ | SINE | Alu | Name=AluJb |
| ADediting_1320583 | chr7_157391982_+ | SINE | Alu | Name=AluJb |
| ADediting_1320584 | chr7_157391992_+ | SINE | Alu | Name=AluJb |
| ADediting_1320585 | chr7_157391996_+ | SINE | Alu | Name=AluJb |
| ADediting_1320586 | chr7_157394992_+ | SINE | Alu | Name=AluJb |
| ADediting_1320587 | chr7_157396081_+ | SINE | Alu | Name=AluSx |
| ADediting_1320588 | chr7_157397928_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1586628 | chr7_157340808_+ | SINE | Alu | Name=AluSx |
| ADediting_1586629 | chr7_157341966_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1586630 | chr7_157341984_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1586631 | chr7_157341996_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1586632 | chr7_157342261_+ | SINE | Alu | Name=AluSx |
| ADediting_1586633 | chr7_157342437_+ | SINE | Alu | Name=AluSq |
| ADediting_1586634 | chr7_157342526_+ | SINE | Alu | Name=AluSq |
| ADediting_1586635 | chr7_157342584_+ | SINE | Alu | Name=AluSq |
| ADediting_1586636 | chr7_157342657_+ | SINE | Alu | Name=AluSx |
| ADediting_1586637 | chr7_157343085_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1586638 | chr7_157343179_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1586639 | chr7_157343184_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1586640 | chr7_157343253_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1586641 | chr7_157343260_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1586642 | chr7_157343299_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1586643 | chr7_157343729_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1586644 | chr7_157344086_+ | SINE | Alu | Name=AluY |
| ADediting_1586645 | chr7_157344168_+ | SINE | Alu | Name=AluY |
| ADediting_1586646 | chr7_157344177_+ | SINE | Alu | Name=AluY |
| ADediting_1586647 | chr7_157344187_+ | SINE | Alu | Name=AluY |
| ADediting_1586648 | chr7_157344190_+ | SINE | Alu | Name=AluY |
| ADediting_1586649 | chr7_157344261_+ | SINE | Alu | Name=AluY |
| ADediting_1586650 | chr7_157344419_+ | SINE | Alu | Name=AluSc8 |
| ADediting_1586651 | chr7_157344434_+ | SINE | Alu | Name=AluSc8 |
| ADediting_1586652 | chr7_157344454_+ | SINE | Alu | Name=AluSc8 |
| ADediting_1586653 | chr7_157344802_+ | SINE | Alu | Name=AluJb |
| ADediting_1586654 | chr7_157344803_+ | SINE | Alu | Name=AluJb |
| ADediting_1586655 | chr7_157344881_+ | SINE | Alu | Name=AluJb |
| ADediting_1586656 | chr7_157344893_+ | SINE | Alu | Name=AluJb |
| ADediting_1586657 | chr7_157345018_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1586658 | chr7_157345094_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1586659 | chr7_157345151_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1586660 | chr7_157345194_+ | SINE | Alu | Name=AluSq2 |
| ADediting_1586661 | chr7_157349848_+ | SINE | Alu | Name=AluSx |
| ADediting_1586662 | chr7_157351123_+ | SINE | Alu | Name=AluSp |
| ADediting_1586663 | chr7_157351559_+ | SINE | Alu | Name=AluY |
| ADediting_1586664 | chr7_157351578_+ | SINE | Alu | Name=AluY |
| ADediting_1586665 | chr7_157351730_+ | SINE | Alu | Name=AluSx |
| ADediting_1586666 | chr7_157351914_+ | SINE | Alu | Name=AluSx |
| ADediting_1586667 | chr7_157352168_+ | SINE | Alu | Name=AluSc5 |
| ADediting_1586668 | chr7_157352250_+ | SINE | Alu | Name=AluSc5 |
| ADediting_1586669 | chr7_157359705_+ | SINE | Alu | Name=AluJo |
| ADediting_1586670 | chr7_157359760_+ | SINE | Alu | Name=AluJo |
| ADediting_1586671 | chr7_157362468_+ | SINE | Alu | Name=AluSp |
| ADediting_1586672 | chr7_157362879_+ | SINE | Alu | Name=AluJr |
| ADediting_1586673 | chr7_157367704_+ | SINE | Alu | Name=AluSp |
| ADediting_1586674 | chr7_157373406_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1586675 | chr7_157373908_+ | SINE | Alu | Name=FLAM_A |
| ADediting_1586676 | chr7_157374377_+ | SINE | Alu | Name=AluSx |
| ADediting_1586677 | chr7_157374389_+ | SINE | Alu | Name=AluSx |
| ADediting_1586678 | chr7_157376680_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1586679 | chr7_157376729_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1586680 | chr7_157379587_+ | SINE | Alu | Name=AluJr |
| ADediting_1586681 | chr7_157379961_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1586682 | chr7_157380079_+ | SINE | Alu | Name=AluSx1 |
| ADediting_1586683 | chr7_157383124_+ | SINE | Alu | Name=AluSz6 |
| ADediting_1586684 | chr7_157383172_+ | SINE | Alu | Name=AluSz6 |
Top |
RNA A-to-I editing events in the alternative splicing sites for DNAJB6 |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
Top |
Differntial gene expression between RNA A-to-I edited versus non-edited samples for DNAJB6 |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
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Protein coding region RNA A-to-I editings for DNAJB6 |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
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The effects of the RNA editing to the miRNA binding sites for DNAJB6 |
| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_107020 | chr1_37500952_- | ENSG00000105993.15 | ENST00000262177.9 | DNAJB6-201 | hsa-miR-5581-3p | chr7 | 157417016 | 157417022 | 7mer-m8 | 157417002 | 157417023 | 155 | -17.94 |
| ADediting_1535951 | chr14_100874558_+ | ENSG00000105993.15 | ENST00000262177.9 | DNAJB6-201 | hsa-miR-337-3p | chr7 | 157416436 | 157416442 | 7mer-m8 | 157416418 | 157416443 | 142 | -17.99 |
| ADediting_1535951 | chr14_100874558_+ | ENSG00000105993.15 | ENST00000443280.5 | DNAJB6-209 | hsa-miR-337-3p | chr7 | 157416436 | 157416442 | 7mer-m8 | 157416418 | 157416443 | 142 | -17.99 |
| ADediting_843620 | chr2_207754818_+ | ENSG00000105993.15 | ENST00000262177.9 | DNAJB6-201 | hsa-miR-4775 | chr7 | 157416644 | 157416650 | 7mer-m8 | 157416631 | 157416651 | 152 | -8.32 |
| ADediting_98288 | chr1_32086990_+ | ENSG00000105993.15 | ENST00000262177.9 | DNAJB6-201 | hsa-miR-5585-3p | chr7 | 157416389 | 157416396 | 8mer-1a | 157416375 | 157416396 | 158 | -18.48 |
| ADediting_98288 | chr1_32086990_+ | ENSG00000105993.15 | ENST00000443280.5 | DNAJB6-209 | hsa-miR-5585-3p | chr7 | 157416389 | 157416396 | 8mer-1a | 157416375 | 157416396 | 158 | -18.48 |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_107020 | chr1_37500952_- | ENSG00000105993.15 | ENST00000429029.6 | DNAJB6-204 | hsa-miR-5581-3p | chr7 | 157385959 | 157385965 | 7mer-m8 | 157385946 | 157385966 | 141 | -10.69 |
| Differentially expressed gene-miRNA network |
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The effects of the RNA editing to the stability of the RNA structures for DNAJB6 |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for DNAJB6 |
| Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| CER | ADediting_1320498 | chr7_157372998_+ | 2.85185133249069e-06 | 0.371553828659329 | 0.000131054219102352 | 0.307249105821765 | 0.198578489112786 | 0.10555930546632 |
| DLPFC | ADediting_1320500 | chr7_157373374_+ | 0.0616417578276726 | 0.106272880387045 | 0.666042790581742 | -0.0246081003485163 | 4.69222619590399e-09 | 0.32493837889008 |
| DLPFC | ADediting_1320502 | chr7_157373412_+ | 0.0851450888667703 | 0.0979397931599713 | 0.974792304936916 | 0.00180194753258079 | 2.09931991585454e-11 | 0.368491241185848 |
| DLPFC | ADediting_1320503 | chr7_157373414_+ | 0.0113269190332316 | 0.143666850890244 | 0.669189498181745 | 0.0243615865614719 | 9.63790228195453e-13 | 0.390635948012737 |
| DLPFC | ADediting_1320504 | chr7_157373420_+ | 0.0193276118102451 | 0.132802374117295 | 0.311154089775801 | 0.0577085431188871 | 3.94394829995406e-09 | 0.326447430928513 |
| CER | ADediting_1320504 | chr7_157373420_+ | 6.90092993624467e-06 | 0.357912462367895 | 3.92057666541217e-08 | 0.430198302641855 | 0.0545666088047603 | 0.15729341903459 |
| CER | ADediting_1320509 | chr7_157373496_+ | 0.00484333636524181 | 0.228882339354105 | 9.06998667426519e-05 | 0.314094997248639 | 0.300192648208993 | 0.0851492823070351 |
| CER | ADediting_1320515 | chr7_157373565_+ | 3.16773603838586e-06 | 0.369964466621234 | 8.52224440837672e-10 | 0.474547847136646 | 0.0539296707678107 | 0.157704675287301 |
| CER | ADediting_1320519 | chr7_157373953_+ | 9.56779226454095e-07 | 0.387598795372231 | 7.10825443124058e-06 | 0.357444518759054 | 0.0335241735610021 | 0.173698114367235 |
| DLPFC | ADediting_1320521 | chr7_157374292_+ | 0.00600602488652921 | 0.155720859795774 | 0.747364853735666 | 0.0183676138884162 | 5.08590557321412e-10 | 0.343647399015028 |
| DLPFC | ADediting_1320524 | chr7_157374481_+ | 0.0920333761461068 | 0.0958551611526329 | 0.47337905198894 | -0.0408704959235824 | 5.79836545517765e-12 | 0.377943074972052 |
| CER | ADediting_1320528 | chr7_157376671_+ | 0.00018570220427889 | 0.300608135495197 | 2.78916785541932e-08 | 0.4344094997384 | 0.444439892555131 | 0.062903253307973 |
| CER | ADediting_1320529 | chr7_157376685_+ | 5.89781172015534e-05 | 0.321895346219811 | 1.5461897088291e-08 | 0.441573043890692 | 0.345587219303425 | 0.0775432369594329 |
| CER | ADediting_1320531 | chr7_157376695_+ | 0.00125858976786634 | 0.260946267119816 | 5.05293642041809e-06 | 0.362795524335027 | 0.209574051084827 | 0.103037934268075 |
| CER | ADediting_1320533 | chr7_157376710_+ | 0.00528072460193319 | 0.226676710259201 | 0.000113543055003866 | 0.309936784385738 | 0.972183377817559 | -0.00287113875282876 |
| DLPFC | ADediting_1320539 | chr7_157376750_+ | 0.217585356355863 | 0.070225442064275 | 0.521558097893787 | -0.0365387070996854 | 5.43567905015369e-08 | 0.302717114141569 |
| CER | ADediting_1320542 | chr7_157376761_+ | 0.0188019006325624 | 0.191652105865145 | 8.23930453261225e-05 | 0.315854589610495 | 0.849965779652677 | 0.0155743701025892 |
| CER | ADediting_1320545 | chr7_157376812_+ | 0.00269290723843538 | 0.243353996134629 | 5.27690667998172e-07 | 0.395995819831235 | 0.873647953735358 | 0.0130934399964591 |
| CER | ADediting_1320546 | chr7_157376829_+ | 0.00451732982792139 | 0.230645529269285 | 2.61946748365239e-06 | 0.372833679013922 | 0.740209577463839 | 0.0272963533637122 |
| CER | ADediting_1320548 | chr7_157376843_+ | 0.000221823046342425 | 0.297159362159318 | 4.27360917538495e-07 | 0.398916893710927 | 0.31768394302557 | 0.0821358328282282 |
| CER | ADediting_1320561 | chr7_157381022_+ | 1.2477304070874e-05 | 0.348405829687189 | 8.4493971525157e-05 | 0.315394400402598 | 0.185905063656122 | 0.108594133640059 |
| TCX | ADediting_1320561 | chr7_157381022_+ | 0.10332683813982 | 0.133522698549989 | 0.341176051104125 | -0.0782531143370968 | 1.08229385604832e-06 | 0.385829968751661 |
| Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 2.91257548363818e-87 | 0.848838633389773 | 8.0060608060914e-65 | 0.780593398397058 | 0.201420752000209 | 0.0727556553462396 |
| AC | 1.75019697502368e-42 | 0.727638312107602 | 1.41834835602022e-26 | 0.607163273884011 | 5.03517037117529e-12 | 0.418567199769399 |
| PCC | 9.67071199604805e-57 | 0.858594857090524 | 1.76779675413105e-54 | 0.849895829152492 | 0.224326181245589 | 0.0883297479051167 |
| CER | 2.1212421225268e-17 | 0.621534788695385 | 7.00207952864043e-22 | 0.682296835913192 | 0.0601045888799903 | 0.153875170757419 |
| TCX | 1.88488113218433e-44 | 0.856969783477786 | 4.02914069536761e-23 | 0.696861225841128 | 0.323499801687785 | 0.0811578611542422 |
| FP | 3.39417612108251e-15 | 0.545608260915281 | 5.68018230037315e-15 | 0.541867222427121 | 0.930358878264807 | 0.00659681148315938 |
| IFG | 3.19463265871424e-06 | 0.786128922886657 | 4.67493515056402e-05 | 0.721624484775008 | 0.908077904748967 | -0.0243351832689419 |
| PG | 6.25323276882077e-54 | 0.853313705548429 | 3.78811927618449e-24 | 0.65478320425507 | 0.885338295809512 | -0.0106451136293145 |
| STG | 9.20768528751388e-15 | 0.721992433225189 | 1.46479587891729e-10 | 0.629127259362069 | 0.602917933073001 | -0.0575750298175787 |
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Relation with AD stages for DNAJB6 |
| Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
| IFG | 0.0404257445341063 | -0.412535376349534 |
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RelatedDrugs for DNAJB6 |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for DNAJB6 |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
| DNAJB6 | C3148763 | MUSCULAR DYSTROPHY, LIMB-GIRDLE, TYPE 1E | 2 | CTD_human;UNIPROT |
| DNAJB6 | C0686353 | Muscular Dystrophies, Limb-Girdle | 1 | CTD_human;GENOMICS_ENGLAND |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
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