ADeditome Logo

Home

Download

Statistics

Landscape

Help

Contact

Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited versus non-edited samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with AD stages

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene


Gene summary for TOM1L1

check button Gene summary
Gene informationGene symbol

TOM1L1

Gene ID

10040

Gene nametarget of myb1 like 1 membrane trafficking protein
SynonymsSRCASM
Cytomap

17q22

Type of geneprotein-coding
DescriptionTOM1-like protein 1src-activating and signaling molecule proteintarget of Myb-like protein 1
Modification date20200313
UniProtAcc

O75674,

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
TOM1L1

GO:0007165

signal transduction

16479011

TOM1L1

GO:0031954

positive regulation of protein autophosphorylation

16479011

TOM1L1

GO:0032147

activation of protein kinase activity

16479011

TOM1L1

GO:0045839

negative regulation of mitotic nuclear division

16479011

TOM1L1

GO:2000278

regulation of DNA biosynthetic process

16479011


Top

RNA A-to-I events for TOM1L1

check buttonRNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure.
* This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage).
all structure

check button RNA editing frequencies across three data sets.
boxplot

check buttonThe number of RNA A-to-I editing events in different types of transcripts (# event, percentage).
boxplot

check button RNA A-to-I editing events in AD.
ADediting_639961(54902352, +), ADediting_639962(54902419, +), ADediting_639963(54902426, +), ADediting_639964(54902565, +), ADediting_639965(54904112, +), ADediting_639966(54904113, +), ADediting_639967(54904249, +), ADediting_639968(54923675, +), ADediting_639969(54923680, +), ADediting_639970(54923864, +), ADediting_639971(54923865, +), ADediting_639972(54923942, +), ADediting_639973(54924341, +), ADediting_639974(54924380, +), ADediting_639975(54924409, +), ADediting_639976(54925720, +), ADediting_639977(54925825, +), ADediting_639978(54925860, +), ADediting_639979(54930578, +), ADediting_639980(54930615, +), ADediting_639981(54930649, +), ADediting_639982(54930650, +), ADediting_639983(54930654, +), ADediting_639984(54930658, +), ADediting_639985(54931538, +), ADediting_639986(54931660, +), ADediting_639987(54931696, +), ADediting_639988(54931735, +), ADediting_639989(54931738, +), ADediting_639990(54931753, +), ADediting_639991(54932041, +), ADediting_639992(54932595, +), ADediting_639993(54932601, +), ADediting_639994(54932621, +), ADediting_639995(54932630, +), ADediting_639996(54933603, +), ADediting_639997(54933609, +), ADediting_639998(54933732, +), ADediting_639999(54933764, +), ADediting_640000(54933783, +), ADediting_640001(54934787, +), ADediting_640002(54934811, +), ADediting_640003(54934817, +), ADediting_640004(54934818, +), ADediting_640005(54934835, +), ADediting_640006(54934970, +), ADediting_640007(54936055, +), ADediting_640008(54938216, +), ADediting_640009(54938222, +), ADediting_640010(54938230, +), ADediting_640011(54938236, +), ADediting_640012(54938239, +), ADediting_640013(54938265, +), ADediting_640014(54938274, +), ADediting_640015(54938279, +), ADediting_640016(54938287, +), ADediting_640017(54938298, +), ADediting_640018(54938308, +), ADediting_640019(54938315, +), ADediting_640020(54938316, +), ADediting_640021(54938317, +), ADediting_640022(54938329, +), ADediting_640023(54938332, +), ADediting_640024(54938333, +), ADediting_640025(54938347, +), ADediting_640026(54938371, +), ADediting_640027(54938373, +), ADediting_640028(54938374, +), ADediting_640029(54938379, +), ADediting_640030(54938383, +), ADediting_640031(54938387, +), ADediting_640032(54938396, +), ADediting_640033(54938400, +), ADediting_640034(54938403, +), ADediting_640035(54938409, +), ADediting_640036(54938414, +), ADediting_640037(54938415, +), ADediting_640038(54938454, +), ADediting_640039(54938477, +), ADediting_640040(54939085, +), ADediting_640041(54939112, +), ADediting_640042(54939118, +), ADediting_640043(54939119, +), ADediting_640044(54939124, +), ADediting_640045(54939140, +), ADediting_640046(54939141, +), ADediting_640047(54939145, +), ADediting_640048(54939147, +), ADediting_640049(54939154, +), ADediting_640050(54939164, +), ADediting_640051(54939167, +), ADediting_640052(54939173, +), ADediting_640053(54939175, +), ADediting_640054(54939178, +), ADediting_640055(54939188, +), ADediting_640056(54939195, +), ADediting_640057(54939196, +), ADediting_640058(54939198, +), ADediting_640059(54939209, +), ADediting_640060(54939213, +), ADediting_640061(54939223, +), ADediting_640062(54939227, +), ADediting_640063(54939251, +), ADediting_640064(54939253, +), ADediting_640065(54939254, +), ADediting_640066(54939259, +), ADediting_640067(54939260, +), ADediting_640068(54939294, +), ADediting_640069(54939306, +), ADediting_640070(54939611, +), ADediting_640071(54939616, +), ADediting_640072(54939627, +), ADediting_640073(54939637, +), ADediting_640074(54939643, +), ADediting_640075(54939644, +), ADediting_640076(54939658, +), ADediting_640077(54939664, +), ADediting_640078(54939670, +), ADediting_640079(54939675, +), ADediting_640080(54939676, +), ADediting_640081(54939683, +), ADediting_640082(54939684, +), ADediting_640083(54939686, +), ADediting_640084(54939696, +), ADediting_640085(54939698, +), ADediting_640086(54939714, +), ADediting_640087(54939746, +), ADediting_640088(54939748, +), ADediting_640089(54939772, +), ADediting_640090(54939773, +), ADediting_640091(54939790, +), ADediting_640092(54939797, +), ADediting_640093(54940025, +), ADediting_640094(54940035, +), ADediting_640095(54940037, +), ADediting_640096(54940041, +), ADediting_640097(54940043, +), ADediting_640098(54940051, +), ADediting_640099(54940057, +), ADediting_640100(54940058, +), ADediting_640101(54940061, +), ADediting_640102(54940062, +), ADediting_640103(54940076, +), ADediting_640104(54940079, +), ADediting_640105(54940081, +), ADediting_640106(54940086, +), ADediting_640107(54940105, +), ADediting_640108(54940116, +), ADediting_640109(54940117, +), ADediting_640110(54940118, +), ADediting_640111(54940130, +), ADediting_640112(54940131, +), ADediting_640113(54940139, +), ADediting_640114(54940158, +), ADediting_640115(54940164, +), ADediting_640116(54940170, +), ADediting_640117(54940180, +), ADediting_640118(54940189, +), ADediting_640119(54940193, +), ADediting_640120(54942128, +), ADediting_640121(54942155, +), ADediting_640122(54942170, +), ADediting_640123(54942171, +), ADediting_640124(54942177, +), ADediting_640125(54942183, +), ADediting_640126(54942190, +), ADediting_640127(54942196, +), ADediting_640128(54942197, +), ADediting_640129(54942214, +), ADediting_640130(54942222, +), ADediting_640131(54942223, +), ADediting_640132(54942226, +), ADediting_640133(54942236, +), ADediting_640134(54942238, +), ADediting_640135(54942242, +), ADediting_640136(54942287, +), ADediting_640137(54942290, +), ADediting_640138(54942304, +), ADediting_640139(54942307, +), ADediting_640140(54942316, +), ADediting_640141(54942329, +), ADediting_640142(54942348, +), ADediting_640143(54942383, +), ADediting_640144(54942389, +), ADediting_640145(54943717, +), ADediting_640146(54943723, +), ADediting_640147(54943724, +), ADediting_640148(54943786, +), ADediting_640149(54943831, +), ADediting_640150(54943847, +), ADediting_640151(54943851, +), ADediting_640152(54943857, +), ADediting_640153(54943858, +), ADediting_640154(54943878, +), ADediting_640155(54943892, +), ADediting_640156(54943898, +), ADediting_640157(54944329, +), ADediting_640158(54944330, +), ADediting_640159(54944335, +), ADediting_640160(54944375, +), ADediting_640161(54944395, +), ADediting_640162(54944400, +), ADediting_640163(54949054, +), ADediting_640164(54949056, +), ADediting_640165(54949081, +), ADediting_640166(54949133, +), ADediting_640167(54949167, +), ADediting_640168(54949177, +), ADediting_640169(54949179, +), ADediting_640170(54949199, +), ADediting_640171(54949246, +), ADediting_640172(54949272, +), ADediting_640173(54949275, +), ADediting_640174(54949297, +), ADediting_640175(54949298, +), ADediting_640176(54949309, +), ADediting_640177(54949316, +), ADediting_1547604(54938335, +), ADediting_1547605(54938464, +), ADediting_1547606(54939224, +), ADediting_1547607(54939243, +), ADediting_1547608(54939709, +), ADediting_1547609(54940032, +), ADediting_1547610(54943871, +), ADediting_1547611(54943879, +), ADediting_1547612(54943922, +), ADediting_1547613(54944193, +), ADediting_1547614(54944199, +), ADediting_1547615(54949126, +), ADediting_1547616(54949252, +), ADediting_1547617(54949296, +), ADediting_1627756(54925848, +),

Top

RNA editing positional annotations for TOM1L1 using Annovar

check button Protein coding RNA editing(s).
ADeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred
ADediting_640137chr17_54942290_+nonsynonymous SNVENST00000576932.5c.A901Gp.R301G...
ADediting_640138chr17_54942304_+synonymous SNVENST00000576932.5c.A915Gp.L305L...
ADediting_640139chr17_54942307_+synonymous SNVENST00000576932.5c.A918Gp.P306P...
ADediting_640140chr17_54942316_+synonymous SNVENST00000576932.5c.A927Gp.P309P...
ADediting_640141chr17_54942329_+nonsynonymous SNVENST00000576932.5c.A940Gp.K314E...
ADediting_640142chr17_54942348_+nonsynonymous SNVENST00000576932.5c.A959Gp.D320G...

check button Gene structure information of RNA editing(s).
ADeditome IDPositionVariant type
ADediting_639961chr17_54902352_+intronic
ADediting_639962chr17_54902419_+intronic
ADediting_639963chr17_54902426_+intronic
ADediting_639964chr17_54902565_+intronic
ADediting_639965chr17_54904112_+intronic
ADediting_639966chr17_54904113_+intronic
ADediting_639967chr17_54904249_+intronic
ADediting_639968chr17_54923675_+intronic
ADediting_639969chr17_54923680_+intronic
ADediting_639970chr17_54923864_+intronic
ADediting_639971chr17_54923865_+intronic
ADediting_639972chr17_54923942_+intronic
ADediting_639973chr17_54924341_+intronic
ADediting_639974chr17_54924380_+intronic
ADediting_639975chr17_54924409_+intronic
ADediting_639976chr17_54925720_+intronic
ADediting_639977chr17_54925825_+intronic
ADediting_639978chr17_54925860_+intronic
ADediting_639979chr17_54930578_+intronic
ADediting_639980chr17_54930615_+intronic
ADediting_639981chr17_54930649_+intronic
ADediting_639982chr17_54930650_+intronic
ADediting_639983chr17_54930654_+intronic
ADediting_639984chr17_54930658_+intronic
ADediting_639985chr17_54931538_+intronic
ADediting_639986chr17_54931660_+intronic
ADediting_639987chr17_54931696_+intronic
ADediting_639988chr17_54931735_+intronic
ADediting_639989chr17_54931738_+intronic
ADediting_639990chr17_54931753_+intronic
ADediting_639991chr17_54932041_+intronic
ADediting_639992chr17_54932595_+intronic
ADediting_639993chr17_54932601_+intronic
ADediting_639994chr17_54932621_+intronic
ADediting_639995chr17_54932630_+intronic
ADediting_639996chr17_54933603_+intronic
ADediting_639997chr17_54933609_+intronic
ADediting_639998chr17_54933732_+intronic
ADediting_639999chr17_54933764_+intronic
ADediting_640000chr17_54933783_+intronic
ADediting_640001chr17_54934787_+intronic
ADediting_640002chr17_54934811_+intronic
ADediting_640003chr17_54934817_+intronic
ADediting_640004chr17_54934818_+intronic
ADediting_640005chr17_54934835_+intronic
ADediting_640006chr17_54934970_+intronic
ADediting_640007chr17_54936055_+intronic
ADediting_640008chr17_54938216_+intronic
ADediting_640009chr17_54938222_+intronic
ADediting_640010chr17_54938230_+intronic
ADediting_640011chr17_54938236_+intronic
ADediting_640012chr17_54938239_+intronic
ADediting_640013chr17_54938265_+intronic
ADediting_640014chr17_54938274_+intronic
ADediting_640015chr17_54938279_+intronic
ADediting_640016chr17_54938287_+intronic
ADediting_640017chr17_54938298_+intronic
ADediting_640018chr17_54938308_+intronic
ADediting_640019chr17_54938315_+intronic
ADediting_640020chr17_54938316_+intronic
ADediting_640021chr17_54938317_+intronic
ADediting_640022chr17_54938329_+intronic
ADediting_640023chr17_54938332_+intronic
ADediting_640024chr17_54938333_+intronic
ADediting_640025chr17_54938347_+intronic
ADediting_640026chr17_54938371_+intronic
ADediting_640027chr17_54938373_+intronic
ADediting_640028chr17_54938374_+intronic
ADediting_640029chr17_54938379_+intronic
ADediting_640030chr17_54938383_+intronic
ADediting_640031chr17_54938387_+intronic
ADediting_640032chr17_54938396_+intronic
ADediting_640033chr17_54938400_+intronic
ADediting_640034chr17_54938403_+intronic
ADediting_640035chr17_54938409_+intronic
ADediting_640036chr17_54938414_+intronic
ADediting_640037chr17_54938415_+intronic
ADediting_640038chr17_54938454_+intronic
ADediting_640039chr17_54938477_+intronic
ADediting_640040chr17_54939085_+intronic
ADediting_640041chr17_54939112_+intronic
ADediting_640042chr17_54939118_+intronic
ADediting_640043chr17_54939119_+intronic
ADediting_640044chr17_54939124_+intronic
ADediting_640045chr17_54939140_+intronic
ADediting_640046chr17_54939141_+intronic
ADediting_640047chr17_54939145_+intronic
ADediting_640048chr17_54939147_+intronic
ADediting_640049chr17_54939154_+intronic
ADediting_640050chr17_54939164_+intronic
ADediting_640051chr17_54939167_+intronic
ADediting_640052chr17_54939173_+intronic
ADediting_640053chr17_54939175_+intronic
ADediting_640054chr17_54939178_+intronic
ADediting_640055chr17_54939188_+intronic
ADediting_640056chr17_54939195_+intronic
ADediting_640057chr17_54939196_+intronic
ADediting_640058chr17_54939198_+intronic
ADediting_640059chr17_54939209_+intronic
ADediting_640060chr17_54939213_+intronic
ADediting_640061chr17_54939223_+intronic
ADediting_640062chr17_54939227_+intronic
ADediting_640063chr17_54939251_+intronic
ADediting_640064chr17_54939253_+intronic
ADediting_640065chr17_54939254_+intronic
ADediting_640066chr17_54939259_+intronic
ADediting_640067chr17_54939260_+intronic
ADediting_640068chr17_54939294_+intronic
ADediting_640069chr17_54939306_+intronic
ADediting_640070chr17_54939611_+intronic
ADediting_640071chr17_54939616_+intronic
ADediting_640072chr17_54939627_+intronic
ADediting_640073chr17_54939637_+intronic
ADediting_640074chr17_54939643_+intronic
ADediting_640075chr17_54939644_+intronic
ADediting_640076chr17_54939658_+intronic
ADediting_640077chr17_54939664_+intronic
ADediting_640078chr17_54939670_+intronic
ADediting_640079chr17_54939675_+intronic
ADediting_640080chr17_54939676_+intronic
ADediting_640081chr17_54939683_+intronic
ADediting_640082chr17_54939684_+intronic
ADediting_640083chr17_54939686_+intronic
ADediting_640084chr17_54939696_+intronic
ADediting_640085chr17_54939698_+intronic
ADediting_640086chr17_54939714_+intronic
ADediting_640087chr17_54939746_+intronic
ADediting_640088chr17_54939748_+intronic
ADediting_640089chr17_54939772_+intronic
ADediting_640090chr17_54939773_+intronic
ADediting_640091chr17_54939790_+intronic
ADediting_640092chr17_54939797_+intronic
ADediting_640093chr17_54940025_+intronic
ADediting_640094chr17_54940035_+intronic
ADediting_640095chr17_54940037_+intronic
ADediting_640096chr17_54940041_+intronic
ADediting_640097chr17_54940043_+intronic
ADediting_640098chr17_54940051_+intronic
ADediting_640099chr17_54940057_+intronic
ADediting_640100chr17_54940058_+intronic
ADediting_640101chr17_54940061_+intronic
ADediting_640102chr17_54940062_+intronic
ADediting_640103chr17_54940076_+intronic
ADediting_640104chr17_54940079_+intronic
ADediting_640105chr17_54940081_+intronic
ADediting_640106chr17_54940086_+intronic
ADediting_640107chr17_54940105_+intronic
ADediting_640108chr17_54940116_+intronic
ADediting_640109chr17_54940117_+intronic
ADediting_640110chr17_54940118_+intronic
ADediting_640111chr17_54940130_+intronic
ADediting_640112chr17_54940131_+intronic
ADediting_640113chr17_54940139_+intronic
ADediting_640114chr17_54940158_+intronic
ADediting_640115chr17_54940164_+intronic
ADediting_640116chr17_54940170_+intronic
ADediting_640117chr17_54940180_+intronic
ADediting_640118chr17_54940189_+intronic
ADediting_640119chr17_54940193_+intronic
ADediting_640120chr17_54942128_+intronic
ADediting_640121chr17_54942155_+intronic
ADediting_640122chr17_54942170_+intronic
ADediting_640123chr17_54942171_+intronic
ADediting_640124chr17_54942177_+intronic
ADediting_640125chr17_54942183_+intronic
ADediting_640126chr17_54942190_+intronic
ADediting_640127chr17_54942196_+intronic
ADediting_640128chr17_54942197_+intronic
ADediting_640129chr17_54942214_+intronic
ADediting_640130chr17_54942222_+intronic
ADediting_640131chr17_54942223_+intronic
ADediting_640132chr17_54942226_+intronic
ADediting_640133chr17_54942236_+intronic
ADediting_640134chr17_54942238_+intronic
ADediting_640135chr17_54942242_+intronic
ADediting_640136chr17_54942287_+splicing
ADediting_640137chr17_54942290_+exonic
ADediting_640138chr17_54942304_+exonic
ADediting_640139chr17_54942307_+exonic
ADediting_640140chr17_54942316_+exonic
ADediting_640141chr17_54942329_+exonic
ADediting_640142chr17_54942348_+exonic
ADediting_640143chr17_54942383_+UTR3
ADediting_640144chr17_54942389_+UTR3
ADediting_640145chr17_54943717_+intronic
ADediting_640146chr17_54943723_+intronic
ADediting_640147chr17_54943724_+intronic
ADediting_640148chr17_54943786_+intronic
ADediting_640149chr17_54943831_+intronic
ADediting_640150chr17_54943847_+intronic
ADediting_640151chr17_54943851_+intronic
ADediting_640152chr17_54943857_+intronic
ADediting_640153chr17_54943858_+intronic
ADediting_640154chr17_54943878_+intronic
ADediting_640155chr17_54943892_+intronic
ADediting_640156chr17_54943898_+intronic
ADediting_640157chr17_54944329_+intronic
ADediting_640158chr17_54944330_+intronic
ADediting_640159chr17_54944335_+intronic
ADediting_640160chr17_54944375_+intronic
ADediting_640161chr17_54944395_+intronic
ADediting_640162chr17_54944400_+intronic
ADediting_640163chr17_54949054_+intronic
ADediting_640164chr17_54949056_+intronic
ADediting_640165chr17_54949081_+intronic
ADediting_640166chr17_54949133_+intronic
ADediting_640167chr17_54949167_+intronic
ADediting_640168chr17_54949177_+intronic
ADediting_640169chr17_54949179_+intronic
ADediting_640170chr17_54949199_+intronic
ADediting_640171chr17_54949246_+intronic
ADediting_640172chr17_54949272_+intronic
ADediting_640173chr17_54949275_+intronic
ADediting_640174chr17_54949297_+intronic
ADediting_640175chr17_54949298_+intronic
ADediting_640176chr17_54949309_+intronic
ADediting_640177chr17_54949316_+intronic
ADediting_1547604chr17_54938335_+intronic
ADediting_1547605chr17_54938464_+intronic
ADediting_1547606chr17_54939224_+intronic
ADediting_1547607chr17_54939243_+intronic
ADediting_1547608chr17_54939709_+intronic
ADediting_1547609chr17_54940032_+intronic
ADediting_1547610chr17_54943871_+intronic
ADediting_1547611chr17_54943879_+intronic
ADediting_1547612chr17_54943922_+intronic
ADediting_1547613chr17_54944193_+intronic
ADediting_1547614chr17_54944199_+intronic
ADediting_1547615chr17_54949126_+intronic
ADediting_1547616chr17_54949252_+intronic
ADediting_1547617chr17_54949296_+intronic
ADediting_1627756chr17_54925848_+intronic

check button Repat-regional RNA editing(s).
ADeditome IDPositionRepeat familyRepeat sub familyRepeat name
ADediting_639961chr17_54902352_+SINEAluName=AluSx
ADediting_639962chr17_54902419_+SINEAluName=AluSx
ADediting_639963chr17_54902426_+SINEAluName=AluSx
ADediting_639964chr17_54902565_+SINEAluName=AluSx
ADediting_639965chr17_54904112_+SINEAluName=AluY
ADediting_639966chr17_54904113_+SINEAluName=AluY
ADediting_639967chr17_54904249_+SINEAluName=AluY
ADediting_639968chr17_54923675_+SINEAluName=AluSx1
ADediting_639969chr17_54923680_+SINEAluName=AluSx1
ADediting_639970chr17_54923864_+SINEAluName=AluSg7
ADediting_639971chr17_54923865_+SINEAluName=AluSg7
ADediting_639972chr17_54923942_+SINEAluName=AluSg7
ADediting_639973chr17_54924341_+SINEAluName=AluSx1
ADediting_639974chr17_54924380_+SINEAluName=AluSx1
ADediting_639975chr17_54924409_+SINEAluName=AluSx1
ADediting_639976chr17_54925720_+SINEAluName=AluSx
ADediting_639977chr17_54925825_+SINEAluName=AluSx
ADediting_639978chr17_54925860_+SINEAluName=AluSx
ADediting_639979chr17_54930578_+SINEAluName=AluSz
ADediting_639980chr17_54930615_+SINEAluName=AluSz
ADediting_639981chr17_54930649_+SINEAluName=AluSz
ADediting_639982chr17_54930650_+SINEAluName=AluSz
ADediting_639983chr17_54930654_+SINEAluName=AluSz
ADediting_639984chr17_54930658_+SINEAluName=AluSz
ADediting_639985chr17_54931538_+SINEAluName=AluJb
ADediting_639986chr17_54931660_+SINEAluName=AluJb
ADediting_639987chr17_54931696_+SINEAluName=AluJb
ADediting_639988chr17_54931735_+SINEAluName=AluJb
ADediting_639989chr17_54931738_+SINEAluName=AluJb
ADediting_639990chr17_54931753_+SINEAluName=AluJb
ADediting_639991chr17_54932041_+SINEAluName=AluSx
ADediting_639992chr17_54932595_+SINEAluName=AluSx
ADediting_639993chr17_54932601_+SINEAluName=AluSx
ADediting_639994chr17_54932621_+SINEAluName=AluSx
ADediting_639995chr17_54932630_+SINEAluName=AluSx
ADediting_639996chr17_54933603_+SINEAluName=AluSc
ADediting_639997chr17_54933609_+SINEAluName=AluSc
ADediting_639998chr17_54933732_+SINEAluName=AluSc
ADediting_639999chr17_54933764_+SINEAluName=AluSc
ADediting_640000chr17_54933783_+SINEAluName=AluSc
ADediting_640001chr17_54934787_+SINEAluName=AluSz
ADediting_640002chr17_54934811_+SINEAluName=AluSz
ADediting_640003chr17_54934817_+SINEAluName=AluSz
ADediting_640004chr17_54934818_+SINEAluName=AluSz
ADediting_640005chr17_54934835_+SINEAluName=AluSz
ADediting_640006chr17_54934970_+SINEAluName=AluSz
ADediting_640007chr17_54936055_+SINEAluName=AluSp
ADediting_640008chr17_54938216_+SINEAluName=AluSx1
ADediting_640009chr17_54938222_+SINEAluName=AluSx1
ADediting_640010chr17_54938230_+SINEAluName=AluSx1
ADediting_640011chr17_54938236_+SINEAluName=AluSx1
ADediting_640012chr17_54938239_+SINEAluName=AluSx1
ADediting_640013chr17_54938265_+SINEAluName=AluSx1
ADediting_640014chr17_54938274_+SINEAluName=AluSx1
ADediting_640015chr17_54938279_+SINEAluName=AluSx1
ADediting_640016chr17_54938287_+SINEAluName=AluSx1
ADediting_640017chr17_54938298_+SINEAluName=AluSx1
ADediting_640018chr17_54938308_+SINEAluName=AluSx1
ADediting_640019chr17_54938315_+SINEAluName=AluSx1
ADediting_640020chr17_54938316_+SINEAluName=AluSx1
ADediting_640021chr17_54938317_+SINEAluName=AluSx1
ADediting_640022chr17_54938329_+SINEAluName=AluSx1
ADediting_640023chr17_54938332_+SINEAluName=AluSx1
ADediting_640024chr17_54938333_+SINEAluName=AluSx1
ADediting_640025chr17_54938347_+SINEAluName=AluSx1
ADediting_640026chr17_54938371_+SINEAluName=AluSx1
ADediting_640027chr17_54938373_+SINEAluName=AluSx1
ADediting_640028chr17_54938374_+SINEAluName=AluSx1
ADediting_640029chr17_54938379_+SINEAluName=AluSx1
ADediting_640030chr17_54938383_+SINEAluName=AluSx1
ADediting_640031chr17_54938387_+SINEAluName=AluSx1
ADediting_640032chr17_54938396_+SINEAluName=AluSx1
ADediting_640033chr17_54938400_+SINEAluName=AluSx1
ADediting_640034chr17_54938403_+SINEAluName=AluSx1
ADediting_640035chr17_54938409_+SINEAluName=AluSx1
ADediting_640036chr17_54938414_+SINEAluName=AluSx1
ADediting_640037chr17_54938415_+SINEAluName=AluSx1
ADediting_640038chr17_54938454_+SINEAluName=AluSx1
ADediting_640039chr17_54938477_+SINEAluName=AluSx1
ADediting_640041chr17_54939112_+SINEAluName=AluSz6
ADediting_640042chr17_54939118_+SINEAluName=AluSz6
ADediting_640043chr17_54939119_+SINEAluName=AluSz6
ADediting_640044chr17_54939124_+SINEAluName=AluSz6
ADediting_640045chr17_54939140_+SINEAluName=AluSz6
ADediting_640046chr17_54939141_+SINEAluName=AluSz6
ADediting_640047chr17_54939145_+SINEAluName=AluSz6
ADediting_640048chr17_54939147_+SINEAluName=AluSz6
ADediting_640049chr17_54939154_+SINEAluName=AluSz6
ADediting_640050chr17_54939164_+SINEAluName=AluSz6
ADediting_640051chr17_54939167_+SINEAluName=AluSz6
ADediting_640052chr17_54939173_+SINEAluName=AluSz6
ADediting_640053chr17_54939175_+SINEAluName=AluSz6
ADediting_640054chr17_54939178_+SINEAluName=AluSz6
ADediting_640055chr17_54939188_+SINEAluName=AluSz6
ADediting_640056chr17_54939195_+SINEAluName=AluSz6
ADediting_640057chr17_54939196_+SINEAluName=AluSz6
ADediting_640058chr17_54939198_+SINEAluName=AluSz6
ADediting_640059chr17_54939209_+SINEAluName=AluSz6
ADediting_640060chr17_54939213_+SINEAluName=AluSz6
ADediting_640061chr17_54939223_+SINEAluName=AluSz6
ADediting_640062chr17_54939227_+SINEAluName=AluSz6
ADediting_640063chr17_54939251_+SINEAluName=AluSz6
ADediting_640064chr17_54939253_+SINEAluName=AluSz6
ADediting_640065chr17_54939254_+SINEAluName=AluSz6
ADediting_640066chr17_54939259_+SINEAluName=AluSz6
ADediting_640067chr17_54939260_+SINEAluName=AluSz6
ADediting_640068chr17_54939294_+SINEAluName=AluSz6
ADediting_640069chr17_54939306_+SINEAluName=AluSz6
ADediting_640070chr17_54939611_+SINEAluName=AluJr
ADediting_640071chr17_54939616_+SINEAluName=AluJr
ADediting_640072chr17_54939627_+SINEAluName=AluJr
ADediting_640073chr17_54939637_+SINEAluName=AluJr
ADediting_640074chr17_54939643_+SINEAluName=AluJr
ADediting_640075chr17_54939644_+SINEAluName=AluJr
ADediting_640076chr17_54939658_+SINEAluName=AluJr
ADediting_640077chr17_54939664_+SINEAluName=AluJr
ADediting_640078chr17_54939670_+SINEAluName=AluJr
ADediting_640079chr17_54939675_+SINEAluName=AluJr
ADediting_640080chr17_54939676_+SINEAluName=AluJr
ADediting_640081chr17_54939683_+SINEAluName=AluJr
ADediting_640082chr17_54939684_+SINEAluName=AluJr
ADediting_640083chr17_54939686_+SINEAluName=AluJr
ADediting_640084chr17_54939696_+SINEAluName=AluJr
ADediting_640085chr17_54939698_+SINEAluName=AluJr
ADediting_640086chr17_54939714_+SINEAluName=AluJr
ADediting_640087chr17_54939746_+SINEAluName=AluJr
ADediting_640088chr17_54939748_+SINEAluName=AluJr
ADediting_640089chr17_54939772_+SINEAluName=AluJr
ADediting_640090chr17_54939773_+SINEAluName=AluJr
ADediting_640091chr17_54939790_+SINEAluName=AluJr
ADediting_640092chr17_54939797_+SINEAluName=AluJr
ADediting_640093chr17_54940025_+SINEAluName=AluSz6
ADediting_640094chr17_54940035_+SINEAluName=AluSz6
ADediting_640095chr17_54940037_+SINEAluName=AluSz6
ADediting_640096chr17_54940041_+SINEAluName=AluSz6
ADediting_640097chr17_54940043_+SINEAluName=AluSz6
ADediting_640098chr17_54940051_+SINEAluName=AluSz6
ADediting_640099chr17_54940057_+SINEAluName=AluSz6
ADediting_640100chr17_54940058_+SINEAluName=AluSz6
ADediting_640101chr17_54940061_+SINEAluName=AluSz6
ADediting_640102chr17_54940062_+SINEAluName=AluSz6
ADediting_640103chr17_54940076_+SINEAluName=AluSz6
ADediting_640104chr17_54940079_+SINEAluName=AluSz6
ADediting_640105chr17_54940081_+SINEAluName=AluSz6
ADediting_640106chr17_54940086_+SINEAluName=AluSz6
ADediting_640107chr17_54940105_+SINEAluName=AluSz6
ADediting_640108chr17_54940116_+SINEAluName=AluSz6
ADediting_640109chr17_54940117_+SINEAluName=AluSz6
ADediting_640110chr17_54940118_+SINEAluName=AluSz6
ADediting_640111chr17_54940130_+SINEAluName=AluSz6
ADediting_640112chr17_54940131_+SINEAluName=AluSz6
ADediting_640113chr17_54940139_+SINEAluName=AluSz6
ADediting_640114chr17_54940158_+SINEAluName=AluSz6
ADediting_640115chr17_54940164_+SINEAluName=AluSz6
ADediting_640116chr17_54940170_+SINEAluName=AluSz6
ADediting_640117chr17_54940180_+SINEAluName=AluSz6
ADediting_640118chr17_54940189_+SINEAluName=AluSz6
ADediting_640119chr17_54940193_+SINEAluName=AluSz6
ADediting_640120chr17_54942128_+SINEAluName=AluSx1
ADediting_640121chr17_54942155_+SINEAluName=AluSx1
ADediting_640122chr17_54942170_+SINEAluName=AluSx1
ADediting_640123chr17_54942171_+SINEAluName=AluSx1
ADediting_640124chr17_54942177_+SINEAluName=AluSx1
ADediting_640125chr17_54942183_+SINEAluName=AluSx1
ADediting_640126chr17_54942190_+SINEAluName=AluSx1
ADediting_640127chr17_54942196_+SINEAluName=AluSx1
ADediting_640128chr17_54942197_+SINEAluName=AluSx1
ADediting_640129chr17_54942214_+SINEAluName=AluSx1
ADediting_640130chr17_54942222_+SINEAluName=AluSx1
ADediting_640131chr17_54942223_+SINEAluName=AluSx1
ADediting_640132chr17_54942226_+SINEAluName=AluSx1
ADediting_640133chr17_54942236_+SINEAluName=AluSx1
ADediting_640134chr17_54942238_+SINEAluName=AluSx1
ADediting_640135chr17_54942242_+SINEAluName=AluSx1
ADediting_640136chr17_54942287_+SINEAluName=AluSx1
ADediting_640137chr17_54942290_+SINEAluName=AluSx1
ADediting_640138chr17_54942304_+SINEAluName=AluSx1
ADediting_640139chr17_54942307_+SINEAluName=AluSx1
ADediting_640140chr17_54942316_+SINEAluName=AluSx1
ADediting_640141chr17_54942329_+SINEAluName=AluSx1
ADediting_640142chr17_54942348_+SINEAluName=AluSx1
ADediting_640143chr17_54942383_+SINEAluName=AluSx1
ADediting_640144chr17_54942389_+SINEAluName=AluSx1
ADediting_640145chr17_54943717_+SINEAluName=AluSc8
ADediting_640146chr17_54943723_+SINEAluName=AluSc8
ADediting_640147chr17_54943724_+SINEAluName=AluSc8
ADediting_640148chr17_54943786_+SINEAluName=AluSc8
ADediting_640149chr17_54943831_+SINEAluName=AluSc8
ADediting_640150chr17_54943847_+SINEAluName=AluSc8
ADediting_640151chr17_54943851_+SINEAluName=AluSc8
ADediting_640152chr17_54943857_+SINEAluName=AluSc8
ADediting_640153chr17_54943858_+SINEAluName=AluSc8
ADediting_640154chr17_54943878_+SINEAluName=AluSc8
ADediting_640155chr17_54943892_+SINEAluName=AluSc8
ADediting_640156chr17_54943898_+SINEAluName=AluSc8
ADediting_640157chr17_54944329_+SINEAluName=AluSz6
ADediting_640158chr17_54944330_+SINEAluName=AluSz6
ADediting_640159chr17_54944335_+SINEAluName=AluSz6
ADediting_640160chr17_54944375_+SINEAluName=AluSz6
ADediting_640161chr17_54944395_+SINEAluName=AluSz6
ADediting_640162chr17_54944400_+SINEAluName=AluSz6
ADediting_640163chr17_54949054_+SINEAluName=AluJo
ADediting_640164chr17_54949056_+SINEAluName=AluJo
ADediting_640165chr17_54949081_+SINEAluName=AluJo
ADediting_640166chr17_54949133_+SINEAluName=AluJo
ADediting_640167chr17_54949167_+SINEAluName=AluJo
ADediting_640168chr17_54949177_+SINEAluName=AluJo
ADediting_640169chr17_54949179_+SINEAluName=AluJo
ADediting_640170chr17_54949199_+SINEAluName=AluJo
ADediting_640171chr17_54949246_+SINEAluName=AluJo
ADediting_640172chr17_54949272_+SINEAluName=AluJo
ADediting_640173chr17_54949275_+SINEAluName=AluJo
ADediting_640174chr17_54949297_+SINEAluName=AluJo
ADediting_640175chr17_54949298_+SINEAluName=AluJo
ADediting_640176chr17_54949309_+SINEAluName=AluJo
ADediting_640177chr17_54949316_+SINEAluName=AluJo
ADediting_1547604chr17_54938335_+SINEAluName=AluSx1
ADediting_1547605chr17_54938464_+SINEAluName=AluSx1
ADediting_1547606chr17_54939224_+SINEAluName=AluSz6
ADediting_1547607chr17_54939243_+SINEAluName=AluSz6
ADediting_1547608chr17_54939709_+SINEAluName=AluJr
ADediting_1547609chr17_54940032_+SINEAluName=AluSz6
ADediting_1547610chr17_54943871_+SINEAluName=AluSc8
ADediting_1547611chr17_54943879_+SINEAluName=AluSc8
ADediting_1547612chr17_54943922_+SINEAluName=AluSc8
ADediting_1547613chr17_54944193_+SINEAluName=AluSz6
ADediting_1547614chr17_54944199_+SINEAluName=AluSz6
ADediting_1547615chr17_54949126_+SINEAluName=AluJo
ADediting_1547616chr17_54949252_+SINEAluName=AluJo
ADediting_1547617chr17_54949296_+SINEAluName=AluJo
ADediting_1627756chr17_54925848_+SINEAluName=AluSx

Top

RNA A-to-I editing events in the alternative splicing sites for TOM1L1

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeADeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength
ESADediting_640137chr17_54942290_+54942269:549422913ss2eTTTTTTTTTTGTATTTTTAGTAG7.28TTTTTTTTTTGTATTTTTAGTGG8.61
ME1ADediting_640137chr17_54942290_+54942269:549422913ss2eTTTTTTTTTTGTATTTTTAGTAG7.28TTTTTTTTTTGTATTTTTAGTGG8.61

check button Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples

Top

Differntial gene expression between RNA A-to-I edited versus non-edited samples for TOM1L1

check button Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event.
* The grey color means N/A.

check button Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event.
boxplot
boxplot
boxplot
boxplot
boxplot
boxplot
boxplot
boxplot
boxplot
boxplot
boxplot
boxplot
boxplot
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.
Soverview
Soverview
Soverview
Soverview

check button - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
Soverview
ADeditome IDChrPositoingSkipped exonENSGENSTs

Top

Protein coding region RNA A-to-I editings for TOM1L1

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.
all structure


Top

The effects of the RNA editing to the miRNA binding sites for TOM1L1


check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
ADediting_1535953chr14_101045971_+ENSG00000141198.16ENST00000572405.5TOM1L1-213hsa-miR-381-3pchr1754916854549168618mer-1a5491683854916861145-14.46
ADediting_1631458chr19_40282624_-ENSG00000141198.16ENST00000572405.5TOM1L1-213hsa-miR-641chr1754916869549168757mer-m85491684854916876150-18.67
ADediting_286380chr11_79422188_-ENSG00000141198.16ENST00000574318.1TOM1L1-217hsa-miR-5579-3pchr1754959420549594267mer-m85495940554959427141-16.09
ADediting_843620chr2_207754818_+ENSG00000141198.16ENST00000572405.5TOM1L1-213hsa-miR-4775chr1754916569549165757mer-m85491655654916576161-11.78
ADediting_98288chr1_32086990_+ENSG00000141198.16ENST00000575333.5TOM1L1-220hsa-miR-5585-3pchr1754937442549374487mer-m85493742754937449147-15.66

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
ADediting_1097295chr3_85385762_+ENSG00000141198.16ENST00000572405.5TOM1L1-213hsa-miR-5688chr1754916793549167997mer-m85491678054916800142-12.86
ADediting_1097295chr3_85385762_+ENSG00000141198.16ENST00000575333.5TOM1L1-220hsa-miR-5688chr1754937973549379797mer-m85493795954937980153-9.4
ADediting_1471003chr9_63819626_+ENSG00000141198.16ENST00000570371.5TOM1L1-204hsa-miR-4477bchr1754937283549372897mer-m85493726954937290155-12.36
ADediting_1471003chr9_63819626_+ENSG00000141198.16ENST00000572405.5TOM1L1-213hsa-miR-4477bchr1754916228549162347mer-m85491621454916235145-11.04
ADediting_1471003chr9_63819626_+ENSG00000141198.16ENST00000575333.5TOM1L1-220hsa-miR-4477bchr1754937283549372897mer-m85493726954937290155-12.36
ADediting_1471004chr9_63819627_+ENSG00000141198.16ENST00000570371.5TOM1L1-204hsa-miR-4477bchr1754937283549372897mer-m85493726954937290155-12.36
ADediting_1471004chr9_63819627_+ENSG00000141198.16ENST00000572405.5TOM1L1-213hsa-miR-4477bchr1754916228549162347mer-m85491621454916235145-11.04
ADediting_1471004chr9_63819627_+ENSG00000141198.16ENST00000575333.5TOM1L1-220hsa-miR-4477bchr1754937283549372897mer-m85493726954937290155-12.36
ADediting_1535951chr14_100874558_+ENSG00000141198.16ENST00000572405.5TOM1L1-213hsa-miR-337-3pchr1754916188549161958mer-1a5491617554916195154-11.38
ADediting_843620chr2_207754818_+ENSG00000141198.16ENST00000348161.8TOM1L1-201hsa-miR-4775chr1754961479549614857mer-m85496146554961486154-5.89
ADediting_843620chr2_207754818_+ENSG00000141198.16ENST00000445275.6TOM1L1-202hsa-miR-4775chr1754961479549614857mer-m85496146554961486154-5.89
ADediting_843620chr2_207754818_+ENSG00000141198.16ENST00000575882.6TOM1L1-221hsa-miR-4775chr1754961479549614857mer-m85496146554961486154-5.89

check button Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for TOM1L1

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in miRNA.
ADeditom_IDENSTmir_IDEditing_InformationEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

check button RNA A-to-I editing in mRNA.
ADeditom_IDENSTEditing_InformationEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

check button RNA A-to-I editing in lncRNA.
ADeditom_IDENSTEditing_InformationEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

Top

Relation with ADAR for TOM1L1

check button Correlation between ADAR gene expression and RNA editing frequency
TissueADeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
TCXADediting_640009chr17_54938222_+0.0006970258362507990.2738328151788720.0001234436213929190.3083733159814140.309924912570171-0.083458829208625
CERADediting_640011chr17_54938236_+3.84758261224936e-090.4578354144520792.59469382550327e-090.4622910501708250.04838113336286360.16146837442561
TCXADediting_640011chr17_54938236_+1.41700500799734e-050.3463230851684112.88985149663585e-090.4610789475204730.0720951059229622-0.14727849239463
CERADediting_640014chr17_54938274_+0.001569643790108020.2559616049273991.51368270885185e-050.3452367216775480.6302135854652020.0396243206098011
TCXADediting_640019chr17_54938315_+0.06691641936400570.1500085830328540.0001270648713641540.3078305672704330.102411163020787-0.133875266731095
TCXADediting_640020chr17_54938316_+0.003367759055245670.2379400423237856.20662126284773e-060.3595827653080680.132133783601242-0.123505187288843
TCXADediting_640021chr17_54938317_+0.01431215389667810.1996397083016722.52540669455797e-050.3366714607657830.0811691093073212-0.142856109479321
CERADediting_640022chr17_54938329_+4.24768698062634e-050.3277034424038485.87501606501683e-070.3944977560557790.1566523780866470.116230221597127
TCXADediting_640022chr17_54938329_+0.006728918931708130.2203844617784760.0001753266865644180.3017145965041330.0897505629872327-0.139025610612267
CERADediting_640024chr17_54938333_+0.000594497126811130.2771976975541484.01543609567408e-050.3286867864848830.1887916950996070.10788993508781
TCXADediting_640028chr17_54938374_+0.004901562295010180.2285786753419129.28099189964693e-050.313672081063640.101601200465161-0.134189207005972
CERADediting_640033chr17_54938400_+0.01441781260972440.1994280585117640.0001431120464421830.3055869106237230.6249146474727180.0402387113805166
DLPFCADediting_640042chr17_54939118_+4.55019537352773e-080.3043933714567065.50666092358567e-090.3235407321033310.3564798979314420.0525474695523249
DLPFCADediting_640043chr17_54939119_+1.55546943627834e-130.4030019175315163.13734773663756e-170.45478737801850.09824994741563090.0940783529231665
DLPFCADediting_640044chr17_54939124_+2.07881162767657e-110.3685645349998362.61220111058529e-150.4289827133869890.06172636916435230.106238521565685
CERADediting_640044chr17_54939124_+0.003267248250256040.2386805181053553.04412461925295e-050.3334814651941130.824722387547596-0.0182344161960423
DLPFCADediting_640045chr17_54939140_+2.9871284946008e-110.3658456209870365.85998930054768e-180.4640329431525970.1901692539460470.0746051170076034
CERADediting_640045chr17_54939140_+0.001490060444850420.2571446483228238.10350417442834e-060.3553640295808540.5319277621985190.0514328870668697
DLPFCADediting_640049chr17_54939154_+6.26935054879066e-110.3602043549947482.9836198025377e-150.4281718805697810.07020715105065470.102976034807836
CERADediting_640049chr17_54939154_+0.001201021104091690.2619907533963169.95102784440382e-060.3520735217045040.2940764888638770.0862301944473088
CERADediting_640050chr17_54939164_+0.0009007439381994990.2683188806777556.43295418446277e-070.3932261445429090.2142816118647880.101987455205489
CERADediting_640060chr17_54939213_+0.0003874712287206870.2860464953177523.27821182651245e-060.3694439739485570.5487721173770440.0493401453280262
CERADediting_640062chr17_54939227_+9.79292120953141e-060.3523314478321614.49931210172972e-080.4284790150219360.4336804299393970.0643965887295679
DLPFCADediting_640063chr17_54939251_+1.11178319238613e-110.3731992025452375.20007320000339e-160.4386578419554170.0691177721618890.103376400539632
CERADediting_640063chr17_54939251_+1.54474515510348e-070.4126331965777551.28036184493751e-080.4438292714781430.2852548837543510.0878158695020993
TCXADediting_640063chr17_54939251_+0.007878601446995490.2161982121755298.79905231438268e-050.31465172623840.0641993966950587-0.151510435515394
DLPFCADediting_640065chr17_54939254_+6.86101885906696e-090.3216087898827085.80380692673584e-100.3425699482525470.05624840542746880.108547858914924
DLPFCADediting_640067chr17_54939260_+1.12222829962482e-090.3371266674959531.27099711622117e-150.4333390311881240.3341333109034720.0550357427249811
TCXADediting_640067chr17_54939260_+0.0004049653250118390.2851469794623643.86996475258685e-050.3293302917269470.238953904111455-0.0967346424711234
CERADediting_640078chr17_54939670_+0.0001188366555099580.3090856913768431.36537176365658e-050.3469322964488550.02219273143427310.186654307133992
TCXADediting_640078chr17_54939670_+0.000128751430640150.307582696422783.79634854927604e-050.3296646493988260.494558090799516-0.0561990461858597
TCXADediting_640079chr17_54939675_+0.0007283376668379060.2728959443425668.03984818772631e-060.3554896543360280.0639954450272021-0.151625252053393
CERADediting_640080chr17_54939676_+3.88944589529403e-060.3668345258706673.79613206367279e-070.400545812925180.01105081899612770.206958895432486
TCXADediting_640080chr17_54939676_+2.11149078538996e-050.3396956439250683.97541896253374e-090.4574628797775820.116106696407856-0.12884079609395
CERADediting_640083chr17_54939686_+1.60258723919786e-070.4121482325745564.78978339344823e-060.3636254385345240.01355148917841620.201205045613589
TCXADediting_640083chr17_54939686_+5.25732299895579e-050.3239431661257991.03736070822571e-100.4964865893872130.0207695351257635-0.188665679886835
TCXADediting_640084chr17_54939696_+0.00763027989686720.217054168207562.63787082006453e-050.3359305931493240.0867944216688458-0.140310712540221
TCXADediting_640085chr17_54939698_+0.04459200258541470.1642504655022273.8571443596175e-050.3293880886214560.0441131363244847-0.164615964232856
CERADediting_640090chr17_54939773_+2.93350372993973e-070.4040603788068491.41439050911774e-080.4426406471506060.211759656873660.102548145651521
TCXADediting_640090chr17_54939773_+2.62017836877402e-050.3360451490574413.70220808573159e-100.4834196936027580.083711257121624-0.14168885648822
DLPFCADediting_640094chr17_54940035_+5.3836951036849e-080.3028079737673092.71668914745639e-080.3091966383398510.3455154147846960.0537555911085815
CERADediting_640094chr17_54940035_+9.47746285332461e-090.4473933159192451.47442356500868e-090.4685735886419410.01084682092209230.207477342052027
DLPFCADediting_640095chr17_54940037_+2.61095524778206e-080.3095627977808853.20671929476136e-090.3282342336839920.08368732575311730.0983982389260455
CERADediting_640095chr17_54940037_+3.00498873009138e-080.4334926029129342.35117282816098e-080.4365009033358830.06081843778710290.153453615630397
TCXADediting_640095chr17_54940037_+4.6352786983125e-060.3641330808268561.39769007952532e-090.4691611524199880.0749176201217944-0.145856928852897
CERADediting_640097chr17_54940043_+4.19763092339605e-080.4293468629956091.1374235714108e-100.4955590888215010.01222505295059330.204128593462346
TCXADediting_640097chr17_54940043_+0.006721592224637160.2204131200232421.41242815284614e-050.3463762328895750.226469440873276-0.0993421050779413
CERADediting_640100chr17_54940058_+0.001256383983874510.2609854750799544.57510615148978e-080.4282697624444270.2235116966021540.0999746178903638
DLPFCADediting_640101chr17_54940061_+1.77945548874845e-070.291256704541722.59806519340347e-090.3300398871725090.4748029877094940.0407391682167685
DLPFCADediting_640103chr17_54940076_+1.27235037346814e-080.3161085573989018.00291191231184e-100.3399308564896210.01007823796092240.1459503800841
CERADediting_640103chr17_54940076_+0.001233554004109610.2613950169738472.84534868869216e-060.3715882727375530.06170341612524220.152936598885876
DLPFCADediting_640104chr17_54940079_+1.56429997743486e-100.3530906354312435.93053833044831e-090.3228907398025110.2736742847021540.0623627848902344
CERADediting_640104chr17_54940079_+0.002556160454541260.2445990244582069.89372695904244e-060.35216654854120.488808801171620.056948786505563
DLPFCADediting_640108chr17_54940116_+1.61473722947024e-120.3870414255576782.83936904915788e-130.3989783753627570.006252660876403060.154980465675128
DLPFCADediting_640109chr17_54940117_+1.45392966934801e-090.3349597123596823.09025863218771e-090.3285524454612610.0007759611663548280.189931703529226
CERADediting_640109chr17_54940117_+0.02737594260559640.180159126465814.19186210248117e-050.3279351077944110.717509722299690.0297825370368846
DLPFCADediting_640112chr17_54940131_+2.00245457976531e-130.4013197225420749.88723533099902e-150.4207646671606740.003148774180595520.167202641589178
DLPFCADediting_640115chr17_54940164_+7.72870227002051e-120.375858446022061.38368613862486e-180.4717685854407310.02489800297733130.127387978629098
CERADediting_640115chr17_54940164_+0.01272242415052750.2030012093037541.11553486512281e-050.3502271433604120.2147237370849650.101889646501912
DLPFCADediting_640116chr17_54940170_+7.72063773471242e-100.3402270426699084.16919872870176e-150.4261215430795550.01575371652788040.13704444733234
CERADediting_640116chr17_54940170_+0.003100074748244960.2399588729897796.91572234572975e-070.3922080675959040.288818074040030.0871715071501409
DLPFCADediting_640119chr17_54940193_+1.91652352166742e-090.3326293595041023.09406865034721e-090.3285418526181470.811269266922834-0.0136166782397454
DLPFCADediting_640121chr17_54942155_+0.7844331675857360.01559846482546670.171906966642994-0.07778600740522322.37690622000199e-120.384319405458054
CERADediting_640158chr17_54944330_+0.001515300870232380.2567633243283785.28816812974449e-050.3238393126195690.8684844799575510.0136332830344989

check button Correlation between ADAR gene expression and this gene's expression
TissueADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
DLPFC1.26381473359734e-620.7722046376999385.66407522580658e-540.7353201501104640.02628890001393020.12620127541991
AC1.45819630081945e-870.8921537477146439.78405503192352e-520.776873611829411.62733862358746e-120.427255830627799
PCC2.10993568340047e-420.792206948885914.58698202137876e-450.8067963546733190.03651326626322480.15143172975003
CER2.09834175764319e-190.650441607098861.34177986761068e-230.7022470317077543.0613431606713e-080.433263603418023
TCX1.72392081667748e-270.7420397679259679.53128303952778e-330.7862227006948770.00697098806842274-0.219452879377593
FP9.59821641508727e-280.702028523908674.0159709567224e-340.7552818247125170.277760571612030.0817913097449085
IFG3.43677560100191e-050.730058038051557.91035227418097e-050.7064799865843730.6714375368762850.0892340376264827
PG2.28356594722791e-530.8510568153711564.50796886871588e-400.7847174827030960.111093551423015-0.117213315553752
STG1.09325082338529e-120.6803390555650295.21868749880651e-190.7887142316209830.606072243019028-0.0570754986574367

Top

Relation with AD stages for TOM1L1

check button Correlation between AD stages and RNA editing frequency
TissueADeditomIDpositionP-valCoeff.
CERADediting_640062chr17_54939227_+6.83322290285964e-050.373550085889623
CERADediting_640094chr17_54940035_+0.0004077110833728590.334212560155521
CERADediting_640100chr17_54940058_+0.001490055761675930.302013176188623
CERADediting_640103chr17_54940076_+0.0006720323356656090.322212944846509

check button Correlation between AD stages and this gene's expression
TissueP-valCoeff.
CER7.92174496304816e-090.520198767836044

Top

RelatedDrugs for TOM1L1

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.0 2018-04-02)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

Top

RelatedDiseases for TOM1L1

check button Diseases associated with this gene.
(DisGeNet 4.0)
GeneDisease IDDisease name# pubmedsSource
TOM1L1C0033578Prostatic Neoplasms1CTD_human
TOM1L1C0376358Malignant neoplasm of prostate1CTD_human