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| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for UPK3BL1 |
 Gene summary |
| Gene information | Gene symbol | UPK3BL1 | Gene ID | 100134938 |
| Gene name | uroplakin 3B like 1 | |
| Synonyms | UPK3BL|UPLP | |
| Cytomap | 7q22.1 | |
| Type of gene | protein-coding | |
| Description | uroplakin-3b-like protein 1uroplakin 3C proteinuroplakin-3-like proteinuroplakin-3b-like proteinuroplakin-like protein | |
| Modification date | 20200313 | |
| UniProtAcc | B0FP48, | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
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RNA A-to-I events for UPK3BL1 |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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| RNA editing frequencies across three data sets. |
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| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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| RNA A-to-I editing events in AD. |
| ADediting_1290973(102637142, -), ADediting_1290974(102637153, -), ADediting_1290975(102637154, -), ADediting_1290976(102637155, -), ADediting_1290977(102637205, -), ADediting_1290978(102637214, -), ADediting_1290979(102637217, -), ADediting_1290980(102637229, -), ADediting_1290981(102637231, -), ADediting_1290982(102637234, -), ADediting_1290983(102637240, -), ADediting_1290984(102637253, -), ADediting_1290985(102637267, -), ADediting_1290986(102637269, -), ADediting_1290987(102637273, -), ADediting_1290988(102637275, -), ADediting_1290989(102637285, -), ADediting_1290990(102637297, -), ADediting_1290991(102637310, -), ADediting_1290992(102637314, -), ADediting_1290993(102637334, -), ADediting_1290994(102637335, -), ADediting_1290995(102637340, -), ADediting_1290996(102638258, -), ADediting_1290997(102638259, -), ADediting_1290998(102638273, -), ADediting_1290999(102638299, -), ADediting_1291000(102638300, -), ADediting_1291001(102638382, -), ADediting_1663264(102637177, -), |
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RNA editing positional annotations for UPK3BL1 using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_1290973 | chr7_102637142_- | ncRNA_intronic |
| ADediting_1290974 | chr7_102637153_- | ncRNA_intronic |
| ADediting_1290975 | chr7_102637154_- | ncRNA_intronic |
| ADediting_1290976 | chr7_102637155_- | ncRNA_intronic |
| ADediting_1290977 | chr7_102637205_- | ncRNA_intronic |
| ADediting_1290978 | chr7_102637214_- | ncRNA_intronic |
| ADediting_1290979 | chr7_102637217_- | ncRNA_intronic |
| ADediting_1290980 | chr7_102637229_- | ncRNA_intronic |
| ADediting_1290981 | chr7_102637231_- | ncRNA_intronic |
| ADediting_1290982 | chr7_102637234_- | ncRNA_intronic |
| ADediting_1290983 | chr7_102637240_- | ncRNA_intronic |
| ADediting_1290984 | chr7_102637253_- | ncRNA_intronic |
| ADediting_1290985 | chr7_102637267_- | ncRNA_intronic |
| ADediting_1290986 | chr7_102637269_- | ncRNA_intronic |
| ADediting_1290987 | chr7_102637273_- | ncRNA_intronic |
| ADediting_1290988 | chr7_102637275_- | ncRNA_intronic |
| ADediting_1290989 | chr7_102637285_- | ncRNA_intronic |
| ADediting_1290990 | chr7_102637297_- | ncRNA_intronic |
| ADediting_1290991 | chr7_102637310_- | ncRNA_intronic |
| ADediting_1290992 | chr7_102637314_- | ncRNA_intronic |
| ADediting_1290993 | chr7_102637334_- | ncRNA_intronic |
| ADediting_1290994 | chr7_102637335_- | ncRNA_intronic |
| ADediting_1290995 | chr7_102637340_- | ncRNA_intronic |
| ADediting_1290996 | chr7_102638258_- | ncRNA_intronic |
| ADediting_1290997 | chr7_102638259_- | ncRNA_intronic |
| ADediting_1290998 | chr7_102638273_- | ncRNA_intronic |
| ADediting_1290999 | chr7_102638299_- | ncRNA_intronic |
| ADediting_1291000 | chr7_102638300_- | ncRNA_intronic |
| ADediting_1291001 | chr7_102638382_- | ncRNA_intronic |
| ADediting_1663264 | chr7_102637177_- | ncRNA_intronic |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_1290973 | chr7_102637142_- | SINE | Alu | Name=AluSc |
| ADediting_1290974 | chr7_102637153_- | SINE | Alu | Name=AluSc |
| ADediting_1290975 | chr7_102637154_- | SINE | Alu | Name=AluSc |
| ADediting_1290976 | chr7_102637155_- | SINE | Alu | Name=AluSc |
| ADediting_1290977 | chr7_102637205_- | SINE | Alu | Name=AluSc |
| ADediting_1290978 | chr7_102637214_- | SINE | Alu | Name=AluSc |
| ADediting_1290979 | chr7_102637217_- | SINE | Alu | Name=AluSc |
| ADediting_1290980 | chr7_102637229_- | SINE | Alu | Name=AluSc |
| ADediting_1290981 | chr7_102637231_- | SINE | Alu | Name=AluSc |
| ADediting_1290982 | chr7_102637234_- | SINE | Alu | Name=AluSc |
| ADediting_1290983 | chr7_102637240_- | SINE | Alu | Name=AluSc |
| ADediting_1290984 | chr7_102637253_- | SINE | Alu | Name=AluSc |
| ADediting_1290985 | chr7_102637267_- | SINE | Alu | Name=AluSc |
| ADediting_1290986 | chr7_102637269_- | SINE | Alu | Name=AluSc |
| ADediting_1290987 | chr7_102637273_- | SINE | Alu | Name=AluSc |
| ADediting_1290988 | chr7_102637275_- | SINE | Alu | Name=AluSc |
| ADediting_1290989 | chr7_102637285_- | SINE | Alu | Name=AluSc |
| ADediting_1290990 | chr7_102637297_- | SINE | Alu | Name=AluSc |
| ADediting_1290991 | chr7_102637310_- | SINE | Alu | Name=AluSc |
| ADediting_1290992 | chr7_102637314_- | SINE | Alu | Name=AluSc |
| ADediting_1290993 | chr7_102637334_- | SINE | Alu | Name=AluSc |
| ADediting_1290994 | chr7_102637335_- | SINE | Alu | Name=AluSc |
| ADediting_1290995 | chr7_102637340_- | SINE | Alu | Name=AluSc |
| ADediting_1290996 | chr7_102638258_- | SINE | Alu | Name=AluSx |
| ADediting_1290997 | chr7_102638259_- | SINE | Alu | Name=AluSx |
| ADediting_1290998 | chr7_102638273_- | SINE | Alu | Name=AluSx |
| ADediting_1290999 | chr7_102638299_- | SINE | Alu | Name=AluSx |
| ADediting_1291000 | chr7_102638300_- | SINE | Alu | Name=AluSx |
| ADediting_1291001 | chr7_102638382_- | SINE | Alu | Name=AluSx |
| ADediting_1663264 | chr7_102637177_- | SINE | Alu | Name=AluSc |
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RNA A-to-I editing events in the alternative splicing sites for UPK3BL1 |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for UPK3BL1 |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |
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Protein coding region RNA A-to-I editings for UPK3BL1 |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
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The effects of the RNA editing to the miRNA binding sites for UPK3BL1 |
| RNA A-to-I editings in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. |
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| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1290974 | chr7_102637153_- | ENSG00000267368.1 | ENST00000340457.8 | UPK3BL1-201 | hsa-miR-383-3p | chr7 | 102637148 | 102637154 | 7mer-m8 | 102637147 | 102637165 | 140 | -16.5 |
| ADediting_1290976 | chr7_102637155_- | ENSG00000267368.1 | ENST00000340457.8 | UPK3BL1-201 | hsa-miR-3192-5p | chr7 | 102637154 | 102637161 | 8mer-1a | 102637154 | 102637175 | 154 | -29.74 |
| ADediting_1290976 | chr7_102637155_- | ENSG00000267368.1 | ENST00000340457.8 | UPK3BL1-201 | hsa-miR-4314 | chr7 | 102637153 | 102637160 | 8mer-1a | 102637153 | 102637170 | 140 | -17.23 |
| ADediting_1290978 | chr7_102637214_- | ENSG00000267368.1 | ENST00000340457.8 | UPK3BL1-201 | hsa-miR-433-5p | chr7 | 102637213 | 102637219 | 7mer-m8 | 102637212 | 102637235 | 159 | -23.87 |
| ADediting_1290986 | chr7_102637269_- | ENSG00000267368.1 | ENST00000340457.8 | UPK3BL1-201 | hsa-miR-6720-3p | chr7 | 102637267 | 102637274 | 8mer-1a | 102637267 | 102637288 | 152 | -21.15 |
| ADediting_1290988 | chr7_102637275_- | ENSG00000267368.1 | ENST00000340457.8 | UPK3BL1-201 | hsa-miR-17-3p | chr7 | 102637272 | 102637278 | 7mer-m8 | 102637271 | 102637293 | 150 | -22.27 |
| ADediting_1290989 | chr7_102637285_- | ENSG00000267368.1 | ENST00000340457.8 | UPK3BL1-201 | hsa-miR-4691-3p | chr7 | 102637281 | 102637287 | 7mer-m8 | 102637280 | 102637306 | 148 | -24.72 |
| ADediting_1290990 | chr7_102637297_- | ENSG00000267368.1 | ENST00000340457.8 | UPK3BL1-201 | hsa-miR-6089 | chr7 | 102637292 | 102637298 | 7mer-m8 | 102637291 | 102637314 | 160 | -35.06 |
| ADediting_1290991 | chr7_102637310_- | ENSG00000267368.1 | ENST00000340457.8 | UPK3BL1-201 | hsa-miR-548at-3p | chr7 | 102637306 | 102637312 | 7mer-m8 | 102637305 | 102637325 | 155 | -14.5 |
| ADediting_1290991 | chr7_102637310_- | ENSG00000267368.1 | ENST00000340457.8 | UPK3BL1-201 | hsa-miR-548ay-3p | chr7 | 102637306 | 102637312 | 7mer-m8 | 102637305 | 102637326 | 156 | -17.33 |
| ADediting_1290992 | chr7_102637314_- | ENSG00000267368.1 | ENST00000340457.8 | UPK3BL1-201 | hsa-miR-6078 | chr7 | 102637310 | 102637317 | 8mer-1a | 102637310 | 102637327 | 150 | -22.83 |
| ADediting_1290993 | chr7_102637334_- | ENSG00000267368.1 | ENST00000340457.8 | UPK3BL1-201 | hsa-miR-17-3p | chr7 | 102637334 | 102637340 | 7mer-m8 | 102637333 | 102637353 | 153 | -18.99 |
| ADediting_1290993 | chr7_102637334_- | ENSG00000267368.1 | ENST00000340457.8 | UPK3BL1-201 | hsa-miR-485-5p | chr7 | 102637330 | 102637336 | 7mer-m8 | 102637329 | 102637349 | 153 | -19.66 |
| ADediting_1290993 | chr7_102637334_- | ENSG00000267368.1 | ENST00000340457.8 | UPK3BL1-201 | hsa-miR-6884-5p | chr7 | 102637330 | 102637336 | 7mer-m8 | 102637329 | 102637351 | 146 | -21.96 |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| ADediting_1290974 | chr7_102637153_- | ENSG00000267368.1 | ENST00000340457.8 | UPK3BL1-201 | hsa-miR-4310 | chr7 | 102637148 | 102637154 | 7mer-m8 | 102637147 | 102637162 | 140 | -8.38 |
| ADediting_1290974 | chr7_102637153_- | ENSG00000267368.1 | ENST00000340457.8 | UPK3BL1-201 | hsa-miR-7157-5p | chr7 | 102637148 | 102637154 | 7mer-m8 | 102637147 | 102637167 | 149 | -18.74 |
| ADediting_1290976 | chr7_102637155_- | ENSG00000267368.1 | ENST00000340457.8 | UPK3BL1-201 | hsa-miR-887-5p | chr7 | 102637154 | 102637161 | 8mer-1a | 102637154 | 102637175 | 150 | -15.15 |
| ADediting_1290977 | chr7_102637205_- | ENSG00000267368.1 | ENST00000340457.8 | UPK3BL1-201 | hsa-miR-3190-5p | chr7 | 102637204 | 102637210 | 7mer-m8 | 102637203 | 102637222 | 147 | -18.34 |
| ADediting_1290977 | chr7_102637205_- | ENSG00000267368.1 | ENST00000340457.8 | UPK3BL1-201 | hsa-miR-548s | chr7 | 102637205 | 102637211 | 7mer-m8 | 102637204 | 102637225 | 143 | -12.53 |
| ADediting_1290980 | chr7_102637229_- | ENSG00000267368.1 | ENST00000340457.8 | UPK3BL1-201 | hsa-miR-3675-3p | chr7 | 102637226 | 102637232 | 7mer-m8 | 102637225 | 102637246 | 145 | -12.58 |
| ADediting_1290981 | chr7_102637231_- | ENSG00000267368.1 | ENST00000340457.8 | UPK3BL1-201 | hsa-miR-3675-3p | chr7 | 102637226 | 102637232 | 7mer-m8 | 102637225 | 102637246 | 145 | -12.58 |
| ADediting_1290984 | chr7_102637253_- | ENSG00000267368.1 | ENST00000340457.8 | UPK3BL1-201 | hsa-miR-1285-3p | chr7 | 102637252 | 102637258 | 7mer-m8 | 102637251 | 102637272 | 140 | -16.14 |
| ADediting_1290984 | chr7_102637253_- | ENSG00000267368.1 | ENST00000340457.8 | UPK3BL1-201 | hsa-miR-4487 | chr7 | 102637248 | 102637255 | 8mer-1a | 102637248 | 102637267 | 144 | -18.15 |
| ADediting_1290984 | chr7_102637253_- | ENSG00000267368.1 | ENST00000340457.8 | UPK3BL1-201 | hsa-miR-5189-5p | chr7 | 102637252 | 102637258 | 7mer-m8 | 102637251 | 102637276 | 145 | -23.05 |
| ADediting_1290984 | chr7_102637253_- | ENSG00000267368.1 | ENST00000340457.8 | UPK3BL1-201 | hsa-miR-612 | chr7 | 102637252 | 102637258 | 7mer-m8 | 102637251 | 102637276 | 152 | -25.15 |
| ADediting_1290985 | chr7_102637267_- | ENSG00000267368.1 | ENST00000340457.8 | UPK3BL1-201 | hsa-miR-550b-2-5p | chr7 | 102637267 | 102637273 | 7mer-m8 | 102637266 | 102637287 | 148 | -17.84 |
| ADediting_1290986 | chr7_102637269_- | ENSG00000267368.1 | ENST00000340457.8 | UPK3BL1-201 | hsa-miR-550a-3-5p | chr7 | 102637267 | 102637274 | 8mer-1a | 102637267 | 102637286 | 143 | -16.2 |
| ADediting_1290986 | chr7_102637269_- | ENSG00000267368.1 | ENST00000340457.8 | UPK3BL1-201 | hsa-miR-550a-5p | chr7 | 102637267 | 102637274 | 8mer-1a | 102637267 | 102637289 | 143 | -18.46 |
| ADediting_1290986 | chr7_102637269_- | ENSG00000267368.1 | ENST00000340457.8 | UPK3BL1-201 | hsa-miR-550b-2-5p | chr7 | 102637267 | 102637273 | 7mer-m8 | 102637266 | 102637287 | 148 | -17.84 |
| ADediting_1290987 | chr7_102637273_- | ENSG00000267368.1 | ENST00000340457.8 | UPK3BL1-201 | hsa-miR-20b-3p | chr7 | 102637272 | 102637278 | 7mer-m8 | 102637271 | 102637293 | 153 | -18.04 |
| ADediting_1290987 | chr7_102637273_- | ENSG00000267368.1 | ENST00000340457.8 | UPK3BL1-201 | hsa-miR-550a-3-5p | chr7 | 102637267 | 102637274 | 8mer-1a | 102637267 | 102637286 | 143 | -16.2 |
| ADediting_1290987 | chr7_102637273_- | ENSG00000267368.1 | ENST00000340457.8 | UPK3BL1-201 | hsa-miR-550a-5p | chr7 | 102637267 | 102637274 | 8mer-1a | 102637267 | 102637289 | 143 | -18.46 |
| ADediting_1290988 | chr7_102637275_- | ENSG00000267368.1 | ENST00000340457.8 | UPK3BL1-201 | hsa-miR-20b-3p | chr7 | 102637272 | 102637278 | 7mer-m8 | 102637271 | 102637293 | 153 | -18.04 |
| ADediting_1290989 | chr7_102637285_- | ENSG00000267368.1 | ENST00000340457.8 | UPK3BL1-201 | hsa-miR-5690 | chr7 | 102637281 | 102637287 | 7mer-m8 | 102637280 | 102637300 | 145 | -17.72 |
| ADediting_1290990 | chr7_102637297_- | ENSG00000267368.1 | ENST00000340457.8 | UPK3BL1-201 | hsa-miR-4478 | chr7 | 102637293 | 102637299 | 7mer-m8 | 102637292 | 102637307 | 145 | -21.77 |
| ADediting_1290990 | chr7_102637297_- | ENSG00000267368.1 | ENST00000340457.8 | UPK3BL1-201 | hsa-miR-485-5p | chr7 | 102637292 | 102637298 | 7mer-m8 | 102637291 | 102637312 | 149 | -17.29 |
| ADediting_1290993 | chr7_102637334_- | ENSG00000267368.1 | ENST00000340457.8 | UPK3BL1-201 | hsa-miR-377-5p | chr7 | 102637330 | 102637336 | 7mer-m8 | 102637329 | 102637350 | 155 | -19.35 |
| ADediting_1290993 | chr7_102637334_- | ENSG00000267368.1 | ENST00000340457.8 | UPK3BL1-201 | hsa-miR-6086 | chr7 | 102637330 | 102637336 | 7mer-m8 | 102637329 | 102637348 | 148 | -19 |
| ADediting_1290993 | chr7_102637334_- | ENSG00000267368.1 | ENST00000340457.8 | UPK3BL1-201 | hsa-miR-6516-5p | chr7 | 102637334 | 102637340 | 7mer-m8 | 102637333 | 102637356 | 147 | -16.38 |
| ADediting_1290994 | chr7_102637335_- | ENSG00000267368.1 | ENST00000340457.8 | UPK3BL1-201 | hsa-miR-377-5p | chr7 | 102637330 | 102637336 | 7mer-m8 | 102637329 | 102637350 | 155 | -19.35 |
| ADediting_1290994 | chr7_102637335_- | ENSG00000267368.1 | ENST00000340457.8 | UPK3BL1-201 | hsa-miR-6086 | chr7 | 102637330 | 102637336 | 7mer-m8 | 102637329 | 102637348 | 148 | -19 |
| ADediting_1290994 | chr7_102637335_- | ENSG00000267368.1 | ENST00000340457.8 | UPK3BL1-201 | hsa-miR-6516-5p | chr7 | 102637334 | 102637340 | 7mer-m8 | 102637333 | 102637356 | 147 | -16.38 |
| ADediting_1290995 | chr7_102637340_- | ENSG00000267368.1 | ENST00000340457.8 | UPK3BL1-201 | hsa-miR-6807-5p | chr7 | 102637340 | 102637346 | 7mer-m8 | 102637339 | 102637360 | 141 | -19.93 |
| ADediting_1663264 | chr7_102637177_- | ENSG00000267368.1 | ENST00000340457.8 | UPK3BL1-201 | hsa-miR-513b-5p | chr7 | 102637177 | 102637183 | 7mer-m8 | 102637176 | 102637197 | 146 | -16.03 |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| ADeditom_ID | Position | ENSG | ENST | Transcript name | miRNA ID | Chromosome | Targt | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| Differentially expressed gene-miRNA network |
| Differentially expressed mRNA-miRNA network |
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The effects of the RNA editing to the stability of the RNA structures for UPK3BL1 |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| ENST00000340457.8 | protein_coding |  |  |
| RNA A-to-I editing in miRNA. |
| ADeditom_ID | ENST | mir_ID | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| RNA A-to-I editing in mRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
| ADediting_1290973 | ENST00000340457.8 | chr7_102637142_- | 1225 | -534.10 | -532.60 | -558.40 |
| ADediting_1290974 | ENST00000340457.8 | chr7_102637153_- | 1214 | -533.50 | -532.60 | -558.40 |
| ADediting_1290975 | ENST00000340457.8 | chr7_102637154_- | 1213 | -534.00 | -532.60 | -558.40 |
| ADediting_1290976 | ENST00000340457.8 | chr7_102637155_- | 1212 | -535.30 | -532.60 | -558.40 |
| ADediting_1663264 | ENST00000340457.8 | chr7_102637177_- | 1190 | -535.40 | -532.60 | -558.40 |
| ADediting_1290977 | ENST00000340457.8 | chr7_102637205_- | 1162 | -533.70 | -532.60 | -558.40 |
| ADediting_1290978 | ENST00000340457.8 | chr7_102637214_- | 1153 | -533.50 | -532.60 | -558.40 |
| ADediting_1290979 | ENST00000340457.8 | chr7_102637217_- | 1150 | -535.00 | -532.60 | -558.40 |
| ADediting_1290980 | ENST00000340457.8 | chr7_102637229_- | 1138 | -532.50 | -532.60 | -558.40 |
| ADediting_1290981 | ENST00000340457.8 | chr7_102637231_- | 1136 | -533.90 | -532.60 | -558.40 |
| ADediting_1290982 | ENST00000340457.8 | chr7_102637234_- | 1133 | -533.80 | -532.60 | -558.40 |
| ADediting_1290983 | ENST00000340457.8 | chr7_102637240_- | 1127 | -533.00 | -532.60 | -558.40 |
| ADediting_1290984 | ENST00000340457.8 | chr7_102637253_- | 1114 | -531.90 | -532.60 | -558.40 |
| ADediting_1290985 | ENST00000340457.8 | chr7_102637267_- | 1100 | -532.60 | -532.60 | -558.40 |
| ADediting_1290986 | ENST00000340457.8 | chr7_102637269_- | 1098 | -532.60 | -532.60 | -558.40 |
| ADediting_1290987 | ENST00000340457.8 | chr7_102637273_- | 1094 | -533.40 | -532.60 | -558.40 |
| ADediting_1290988 | ENST00000340457.8 | chr7_102637275_- | 1092 | -534.40 | -532.60 | -558.40 |
| ADediting_1290989 | ENST00000340457.8 | chr7_102637285_- | 1082 | -532.60 | -532.60 | -558.40 |
| ADediting_1290990 | ENST00000340457.8 | chr7_102637297_- | 1070 | -532.50 | -532.60 | -558.40 |
| ADediting_1290991 | ENST00000340457.8 | chr7_102637310_- | 1057 | -535.50 | -532.60 | -558.40 |
| ADediting_1290992 | ENST00000340457.8 | chr7_102637314_- | 1053 | -532.30 | -532.60 | -558.40 |
| ADediting_1290993 | ENST00000340457.8 | chr7_102637334_- | 1033 | -534.60 | -532.60 | -558.40 |
| ADediting_1290994 | ENST00000340457.8 | chr7_102637335_- | 1032 | -532.80 | -532.60 | -558.40 |
| ADediting_1290995 | ENST00000340457.8 | chr7_102637340_- | 1027 | -534.70 | -532.60 | -558.40 |
| RNA A-to-I editing in lncRNA. |
| ADeditom_ID | ENST | Editing_Information | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for UPK3BL1 |
| Correlation between ADAR gene expression and RNA editing frequency |
| Tissue | ADeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| Correlation between ADAR gene expression and this gene's expression |
| Tissue | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| DLPFC | 0.000625284117934721 | 0.193212690994504 | 0.640427042376562 | 0.0266324821913462 | 1.1102709176059e-39 | 0.65702223701777 |
| AC | 1.52013546834555e-14 | 0.460782770141825 | 2.03706208494163e-11 | 0.407458525152106 | 7.27243809718757e-09 | 0.355599146189375 |
| FP | 2.11157720885305e-05 | 0.312919746725788 | 1.54717557183768e-05 | 0.317741049593543 | 1.90913782558793e-05 | 0.314491265955077 |
| STG | 0.0341427550446369 | 0.231453981843057 | 0.598615002432886 | 0.0582583287268329 | 9.60519532178628e-06 | 0.462189559069217 |
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Relation with AD stages for UPK3BL1 |
| Correlation between AD stages and RNA editing frequency |
| Tissue | ADeditomID | position | P-val | Coeff. |
| Correlation between AD stages and this gene's expression |
| Tissue | P-val | Coeff. |
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RelatedDrugs for UPK3BL1 |
| Approved drugs targeting this gene. (DrugBank Version 5.1.0 2018-04-02) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for UPK3BL1 |
| Diseases associated with this gene. (DisGeNet 4.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
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