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| Differntial gene expression between RNA A-to-I edited versus non-edited samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Gene summary for UQCRHL |
 Gene summary |
| Gene information | Gene symbol | UQCRHL | Gene ID | 440567 |
| Gene name | ubiquinol-cytochrome c reductase hinge protein like | |
| Synonyms | - | |
| Cytomap | 1p36.21 | |
| Type of gene | protein-coding | |
| Description | cytochrome b-c1 complex subunit 6-like, mitochondrialhCG25371 | |
| Modification date | 20200313 | |
| UniProtAcc | A0A096LP55, | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
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RNA A-to-I events for UQCRHL |
| RNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure. * This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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| RNA editing frequencies across three data sets. |
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| The number of RNA A-to-I editing events in different types of transcripts (# event, percentage). |
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| RNA A-to-I editing events in AD. |
| ADediting_36023(15807417, -), ADediting_36024(15807419, -), ADediting_36025(15807721, -), ADediting_36026(15807726, -), ADediting_36027(15807727, -), ADediting_36028(15807728, -), ADediting_36029(15807736, -), ADediting_36030(15807746, -), ADediting_36031(15807759, -), ADediting_36032(15807760, -), ADediting_36033(15807795, -), ADediting_36034(15807922, -), ADediting_36035(15807934, -), ADediting_36036(15807935, -), ADediting_36037(15807961, -), ADediting_36038(15807962, -), ADediting_36039(15807981, -), ADediting_36040(15807999, -), ADediting_36041(15808039, -), ADediting_36042(15808041, -), ADediting_36043(15808067, -), ADediting_36044(15808071, -), ADediting_36045(15808092, -), ADediting_36046(15808095, -), ADediting_36047(15808103, -), ADediting_36048(15808135, -), ADediting_36049(15808141, -), ADediting_36050(15808143, -), ADediting_36051(15808173, -), ADediting_36052(15808177, -), ADediting_36053(15808178, -), ADediting_36054(15808324, -), ADediting_36055(15808542, -), ADediting_36056(15808544, -), ADediting_36057(15808579, -), ADediting_36058(15808587, -), ADediting_36059(15808628, -), ADediting_36060(15808654, -), ADediting_36061(15808664, -), ADediting_36062(15808684, -), ADediting_36063(15808705, -), ADediting_36064(15808724, -), ADediting_36065(15808734, -), ADediting_36066(15808764, -), ADediting_36067(15808787, -), ADediting_1515863(15807715, -), ADediting_1515864(15807734, -), ADediting_1515865(15808022, -), ADediting_1515866(15808031, -), ADediting_1515867(15808069, -), ADediting_1515868(15808295, -), ADediting_1515869(15808296, -), ADediting_1515870(15808339, -), ADediting_1515871(15808618, -), ADediting_1515872(15808666, -), ADediting_1515873(15808719, -), |
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RNA editing positional annotations for UQCRHL using Annovar |
| Protein coding RNA editing(s). |
| ADeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| ADediting_36023 | chr1_15807417_- | nonsynonymous SNV | ENST00000483273.2 | c.A233G | p.K78R | . | . | . |
| ADediting_36024 | chr1_15807419_- | synonymous SNV | ENST00000483273.2 | c.A231G | p.A77A | . | . | . |
| Gene structure information of RNA editing(s). |
| ADeditome ID | Position | Variant type |
| ADediting_36023 | chr1_15807417_- | exonic |
| ADediting_36024 | chr1_15807419_- | exonic |
| ADediting_36025 | chr1_15807721_- | UTR5 |
| ADediting_36026 | chr1_15807726_- | UTR5 |
| ADediting_36027 | chr1_15807727_- | UTR5 |
| ADediting_36028 | chr1_15807728_- | UTR5 |
| ADediting_36029 | chr1_15807736_- | UTR5 |
| ADediting_36030 | chr1_15807746_- | UTR5 |
| ADediting_36031 | chr1_15807759_- | UTR5 |
| ADediting_36032 | chr1_15807760_- | UTR5 |
| ADediting_36033 | chr1_15807795_- | UTR5 |
| ADediting_36034 | chr1_15807922_- | UTR5 |
| ADediting_36035 | chr1_15807934_- | UTR5 |
| ADediting_36036 | chr1_15807935_- | UTR5 |
| ADediting_36037 | chr1_15807961_- | UTR5 |
| ADediting_36038 | chr1_15807962_- | UTR5 |
| ADediting_36039 | chr1_15807981_- | UTR5 |
| ADediting_36040 | chr1_15807999_- | UTR5 |
| ADediting_36041 | chr1_15808039_- | UTR5 |
| ADediting_36042 | chr1_15808041_- | UTR5 |
| ADediting_36043 | chr1_15808067_- | UTR5 |
| ADediting_36044 | chr1_15808071_- | UTR5 |
| ADediting_36045 | chr1_15808092_- | UTR5 |
| ADediting_36046 | chr1_15808095_- | UTR5 |
| ADediting_36047 | chr1_15808103_- | UTR5 |
| ADediting_36048 | chr1_15808135_- | UTR5 |
| ADediting_36049 | chr1_15808141_- | UTR5 |
| ADediting_36050 | chr1_15808143_- | UTR5 |
| ADediting_36051 | chr1_15808173_- | UTR5 |
| ADediting_36052 | chr1_15808177_- | UTR5 |
| ADediting_36053 | chr1_15808178_- | UTR5 |
| ADediting_36054 | chr1_15808324_- | UTR5 |
| ADediting_36055 | chr1_15808542_- | UTR5 |
| ADediting_36056 | chr1_15808544_- | UTR5 |
| ADediting_36057 | chr1_15808579_- | UTR5 |
| ADediting_36058 | chr1_15808587_- | UTR5 |
| ADediting_36059 | chr1_15808628_- | UTR5 |
| ADediting_36060 | chr1_15808654_- | UTR5 |
| ADediting_36061 | chr1_15808664_- | UTR5 |
| ADediting_36062 | chr1_15808684_- | UTR5 |
| ADediting_36063 | chr1_15808705_- | UTR5 |
| ADediting_36064 | chr1_15808724_- | UTR5 |
| ADediting_36065 | chr1_15808734_- | UTR5 |
| ADediting_36066 | chr1_15808764_- | UTR5 |
| ADediting_36067 | chr1_15808787_- | UTR5 |
| ADediting_1515863 | chr1_15807715_- | UTR5 |
| ADediting_1515864 | chr1_15807734_- | UTR5 |
| ADediting_1515865 | chr1_15808022_- | UTR5 |
| ADediting_1515866 | chr1_15808031_- | UTR5 |
| ADediting_1515867 | chr1_15808069_- | UTR5 |
| ADediting_1515868 | chr1_15808295_- | UTR5 |
| ADediting_1515869 | chr1_15808296_- | UTR5 |
| ADediting_1515870 | chr1_15808339_- | UTR5 |
| ADediting_1515871 | chr1_15808618_- | UTR5 |
| ADediting_1515872 | chr1_15808666_- | UTR5 |
| ADediting_1515873 | chr1_15808719_- | UTR5 |
| Repat-regional RNA editing(s). |
| ADeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| ADediting_36025 | chr1_15807721_- | SINE | Alu | Name=AluSx |
| ADediting_36026 | chr1_15807726_- | SINE | Alu | Name=AluSx |
| ADediting_36027 | chr1_15807727_- | SINE | Alu | Name=AluSx |
| ADediting_36028 | chr1_15807728_- | SINE | Alu | Name=AluSx |
| ADediting_36029 | chr1_15807736_- | SINE | Alu | Name=AluSx |
| ADediting_36030 | chr1_15807746_- | SINE | Alu | Name=AluSx |
| ADediting_36031 | chr1_15807759_- | SINE | Alu | Name=AluSx |
| ADediting_36032 | chr1_15807760_- | SINE | Alu | Name=AluSx |
| ADediting_36033 | chr1_15807795_- | SINE | Alu | Name=AluSx |
| ADediting_36034 | chr1_15807922_- | SINE | Alu | Name=AluJb |
| ADediting_36035 | chr1_15807934_- | SINE | Alu | Name=AluJb |
| ADediting_36036 | chr1_15807935_- | SINE | Alu | Name=AluJb |
| ADediting_36037 | chr1_15807961_- | SINE | Alu | Name=AluJb |
| ADediting_36038 | chr1_15807962_- | SINE | Alu | Name=AluJb |
| ADediting_36039 | chr1_15807981_- | SINE | Alu | Name=AluJb |
| ADediting_36040 | chr1_15807999_- | SINE | Alu | Name=AluJb |
| ADediting_36041 | chr1_15808039_- | SINE | Alu | Name=AluJb |
| ADediting_36042 | chr1_15808041_- | SINE | Alu | Name=AluJb |
| ADediting_36043 | chr1_15808067_- | SINE | Alu | Name=AluJb |
| ADediting_36044 | chr1_15808071_- | SINE | Alu | Name=AluJb |
| ADediting_36045 | chr1_15808092_- | SINE | Alu | Name=AluJb |
| ADediting_36046 | chr1_15808095_- | SINE | Alu | Name=AluJb |
| ADediting_36047 | chr1_15808103_- | SINE | Alu | Name=AluJb |
| ADediting_36048 | chr1_15808135_- | SINE | Alu | Name=AluJb |
| ADediting_36049 | chr1_15808141_- | SINE | Alu | Name=AluJb |
| ADediting_36050 | chr1_15808143_- | SINE | Alu | Name=AluJb |
| ADediting_36051 | chr1_15808173_- | SINE | Alu | Name=AluJb |
| ADediting_36052 | chr1_15808177_- | SINE | Alu | Name=AluJb |
| ADediting_36053 | chr1_15808178_- | SINE | Alu | Name=AluJb |
| ADediting_36054 | chr1_15808324_- | SINE | Alu | Name=AluSc |
| ADediting_36055 | chr1_15808542_- | SINE | Alu | Name=AluSx |
| ADediting_36056 | chr1_15808544_- | SINE | Alu | Name=AluSx |
| ADediting_36057 | chr1_15808579_- | SINE | Alu | Name=AluSx |
| ADediting_36058 | chr1_15808587_- | SINE | Alu | Name=AluSx |
| ADediting_36059 | chr1_15808628_- | SINE | Alu | Name=AluSx |
| ADediting_36060 | chr1_15808654_- | SINE | Alu | Name=AluSx |
| ADediting_36061 | chr1_15808664_- | SINE | Alu | Name=AluSx |
| ADediting_36062 | chr1_15808684_- | SINE | Alu | Name=AluSx |
| ADediting_36063 | chr1_15808705_- | SINE | Alu | Name=AluSx |
| ADediting_36064 | chr1_15808724_- | SINE | Alu | Name=AluSx |
| ADediting_36065 | chr1_15808734_- | SINE | Alu | Name=AluSx |
| ADediting_36066 | chr1_15808764_- | SINE | Alu | Name=AluSx |
| ADediting_36067 | chr1_15808787_- | SINE | Alu | Name=AluSx |
| ADediting_1515863 | chr1_15807715_- | SINE | Alu | Name=AluSx |
| ADediting_1515864 | chr1_15807734_- | SINE | Alu | Name=AluSx |
| ADediting_1515865 | chr1_15808022_- | SINE | Alu | Name=AluJb |
| ADediting_1515866 | chr1_15808031_- | SINE | Alu | Name=AluJb |
| ADediting_1515867 | chr1_15808069_- | SINE | Alu | Name=AluJb |
| ADediting_1515868 | chr1_15808295_- | SINE | Alu | Name=AluSc |
| ADediting_1515869 | chr1_15808296_- | SINE | Alu | Name=AluSc |
| ADediting_1515870 | chr1_15808339_- | SINE | Alu | Name=AluSc |
| ADediting_1515871 | chr1_15808618_- | SINE | Alu | Name=AluSx |
| ADediting_1515872 | chr1_15808666_- | SINE | Alu | Name=AluSx |
| ADediting_1515873 | chr1_15808719_- | SINE | Alu | Name=AluSx |
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RNA A-to-I editing events in the alternative splicing sites for UQCRHL |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | ADeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for UQCRHL |
| Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event. * The grey color means N/A. |
| Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event. |
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| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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| ADeditome ID | Chr | Positoing | Skipped exon | ENSG | ENSTs |