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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited versus non-edited samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with AD stages

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene


Gene summary for CYTOR

check button Gene summary
Gene informationGene symbol

CYTOR

Gene ID

112597

Gene namecytoskeleton regulator RNA
SynonymsC2orf59|LINC00152|NCRNA00152
Cytomap

2p11.2

Type of genencRNA
Descriptionlong intergenic non-protein coding RNA 152
Modification date20200313
UniProtAcc

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID

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RNA A-to-I events for CYTOR

check buttonRNA A-to-I editing events in the ROSMAP, MSBB, and Mayo data sets based on Ensembl gene isoform structure.
* This pie chart shows the number of RNA A-to-I editing events in different types of transcripts (# event, percentage).
all structure

check button RNA editing frequencies across three data sets.

check buttonThe number of RNA A-to-I editing events in different types of transcripts (# event, percentage).
boxplot

check button RNA A-to-I editing events in AD.
ADediting_905705(87460249, +), ADediting_905727(87480866, +), ADediting_905728(87480876, +), ADediting_905729(87480877, +), ADediting_905730(87480898, +), ADediting_905731(87481186, +), ADediting_905732(87481197, +), ADediting_905733(87481210, +), ADediting_905734(87481216, +), ADediting_905735(87481234, +), ADediting_905736(87481368, +), ADediting_905737(87481930, +), ADediting_905743(87561356, +),

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RNA editing positional annotations for CYTOR using Annovar

check button Protein coding RNA editing(s).
ADeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
ADeditome IDPositionVariant type
ADediting_905705chr2_87460249_+ncRNA_intronic
ADediting_905727chr2_87480866_+ncRNA_intronic
ADediting_905728chr2_87480876_+ncRNA_intronic
ADediting_905729chr2_87480877_+ncRNA_intronic
ADediting_905730chr2_87480898_+ncRNA_intronic
ADediting_905731chr2_87481186_+ncRNA_intronic
ADediting_905732chr2_87481197_+ncRNA_intronic
ADediting_905733chr2_87481210_+ncRNA_intronic
ADediting_905734chr2_87481216_+ncRNA_intronic
ADediting_905735chr2_87481234_+ncRNA_intronic
ADediting_905736chr2_87481368_+ncRNA_intronic
ADediting_905737chr2_87481930_+ncRNA_intronic
ADediting_905743chr2_87561356_+ncRNA_intronic

check button Repat-regional RNA editing(s).
ADeditome IDPositionRepeat familyRepeat sub familyRepeat name
ADediting_905705chr2_87460249_+LTRERVL-MaLRName=MLT1J
ADediting_905727chr2_87480866_+SINEAluName=AluSx3
ADediting_905728chr2_87480876_+SINEAluName=AluSx3
ADediting_905729chr2_87480877_+SINEAluName=AluSx3
ADediting_905730chr2_87480898_+SINEAluName=AluSx3
ADediting_905731chr2_87481186_+SINEAluName=AluSx1
ADediting_905732chr2_87481197_+SINEAluName=AluSx1
ADediting_905733chr2_87481210_+SINEAluName=AluSx1
ADediting_905734chr2_87481216_+SINEAluName=AluSx1
ADediting_905735chr2_87481234_+SINEAluName=AluSx1
ADediting_905736chr2_87481368_+SINEAluName=AluSx1
ADediting_905737chr2_87481930_+SINEAluName=AluY
ADediting_905743chr2_87561356_+SINEAluName=AluJb

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RNA A-to-I editing events in the alternative splicing sites for CYTOR

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeADeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential pencent of spliced in (PSI) between RNA A-to-I edited and non-edited samples

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for CYTOR

check button Distribution of the averaged gene expression in AD and control with or without RNA A-to-I editing event.
* The grey color means N/A.

check button Distribution of the averaged gene isoform expression in AD and control with or without RNA A-to-I editing event.

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

check button - Differentially expressed transcript between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

ADeditome IDChrPositoingSkipped exonENSGENSTs

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Protein coding region RNA A-to-I editings for CYTOR

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for CYTOR


check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
ADediting_1097295chr3_85385762_+ENSG00000222041.11ENST00000642451.1CYTOR-216hsa-miR-5688chr287585384875853918mer-1a8758536887585391157-14.23
ADediting_1097295chr3_85385762_+ENSG00000222041.11ENST00000642451.1CYTOR-216hsa-miR-5688chr287586223875862297mer-m88758620987586230159-12.2
ADediting_1097295chr3_85385762_+ENSG00000222041.11ENST00000642451.1CYTOR-216hsa-miR-5688chr287586945875869528mer-1a8758693087586952149-13.28
ADediting_1337757chr7_5495852_-ENSG00000222041.11ENST00000409054.2CYTOR-202hsa-miR-589-3pchr287516767875167737mer-m88751675187516774151-17.71
ADediting_1337757chr7_5495852_-ENSG00000222041.11ENST00000409139.6CYTOR-203hsa-miR-589-3pchr287606643876066497mer-m88760662787606650140-11.87
ADediting_1337757chr7_5495852_-ENSG00000222041.11ENST00000409898.2CYTOR-204hsa-miR-589-3pchr287606643876066497mer-m88760662787606650140-11.87
ADediting_1337757chr7_5495852_-ENSG00000222041.11ENST00000642451.1CYTOR-216hsa-miR-589-3pchr287583953875839597mer-m88758393787583960147-15.85
ADediting_1337757chr7_5495852_-ENSG00000222041.11ENST00000642451.1CYTOR-216hsa-miR-589-3pchr287590355875903617mer-m88759033987590362140-14.21
ADediting_1337757chr7_5495852_-ENSG00000222041.11ENST00000642451.1CYTOR-216hsa-miR-589-3pchr287590378875903847mer-m88759036487590385147-15.04
ADediting_1337757chr7_5495852_-ENSG00000222041.11ENST00000642796.1CYTOR-217hsa-miR-589-3pchr287606643876066497mer-m88760662787606650140-11.87
ADediting_1337757chr7_5495852_-ENSG00000222041.11ENST00000642872.1CYTOR-218hsa-miR-589-3pchr287606643876066497mer-m88760662787606650140-11.87
ADediting_1337757chr7_5495852_-ENSG00000222041.11ENST00000643070.1CYTOR-219hsa-miR-589-3pchr287606643876066497mer-m88760662787606650140-11.87
ADediting_1337757chr7_5495852_-ENSG00000222041.11ENST00000643509.1CYTOR-221hsa-miR-589-3pchr287516767875167737mer-m88751675187516774151-17.71
ADediting_1337757chr7_5495852_-ENSG00000222041.11ENST00000643509.1CYTOR-221hsa-miR-589-3pchr287516951875169577mer-m88751693387516958148-14.94
ADediting_1337757chr7_5495852_-ENSG00000222041.11ENST00000643743.1CYTOR-223hsa-miR-589-3pchr287606643876066497mer-m88760662787606650140-11.87
ADediting_1337757chr7_5495852_-ENSG00000222041.11ENST00000644125.1CYTOR-225hsa-miR-589-3pchr287627128876271347mer-m88762711287627135140-18.25
ADediting_1337757chr7_5495852_-ENSG00000222041.11ENST00000644478.1CYTOR-226hsa-miR-589-3pchr287606643876066497mer-m88760662787606650140-11.87
ADediting_1337757chr7_5495852_-ENSG00000222041.11ENST00000644478.1CYTOR-226hsa-miR-589-3pchr287627128876271347mer-m88762711287627135140-18.25
ADediting_1337757chr7_5495852_-ENSG00000222041.11ENST00000644552.1CYTOR-227hsa-miR-589-3pchr287606643876066497mer-m88760662787606650140-11.87
ADediting_1337757chr7_5495852_-ENSG00000222041.11ENST00000644938.1CYTOR-229hsa-miR-589-3pchr287606643876066497mer-m88760662787606650140-11.87
ADediting_1337757chr7_5495852_-ENSG00000222041.11ENST00000644976.1CYTOR-230hsa-miR-589-3pchr287606643876066497mer-m88760662787606650140-11.87
ADediting_1337757chr7_5495852_-ENSG00000222041.11ENST00000645257.1CYTOR-232hsa-miR-589-3pchr287470460874704667mer-m88747044487470467154-26.59
ADediting_1337757chr7_5495852_-ENSG00000222041.11ENST00000645707.1CYTOR-233hsa-miR-589-3pchr287604157876065987mer-m88760414087606599150-24.05
ADediting_1337757chr7_5495852_-ENSG00000222041.11ENST00000645707.1CYTOR-233hsa-miR-589-3pchr287606643876066497mer-m88760662787606650140-11.87
ADediting_1337757chr7_5495852_-ENSG00000222041.11ENST00000646578.1CYTOR-236hsa-miR-589-3pchr287606643876066497mer-m88760662787606650140-11.87
ADediting_1337757chr7_5495852_-ENSG00000222041.11ENST00000646636.1CYTOR-237hsa-miR-589-3pchr287606643876066497mer-m88760662787606650140-11.87
ADediting_1337758chr7_5495892_-ENSG00000222041.11ENST00000645257.1CYTOR-232hsa-miR-589-5pchr287470532874705398mer-1a8747051887470539148-21.25
ADediting_1391023chr8_140732605_-ENSG00000222041.11ENST00000409139.6CYTOR-203hsa-miR-151a-3pchr287607050876070567mer-m88760703787607057142-14.62
ADediting_1391023chr8_140732605_-ENSG00000222041.11ENST00000642796.1CYTOR-217hsa-miR-151a-3pchr287455357874553637mer-m88745534487455364140-19.42
ADediting_1391023chr8_140732605_-ENSG00000222041.11ENST00000642872.1CYTOR-218hsa-miR-151a-3pchr287607050876070567mer-m88760703787607057142-14.62
ADediting_1391023chr8_140732605_-ENSG00000222041.11ENST00000643070.1CYTOR-219hsa-miR-151a-3pchr287607050876070567mer-m88760703787607057142-14.62
ADediting_1391023chr8_140732605_-ENSG00000222041.11ENST00000643589.1CYTOR-222hsa-miR-151a-3pchr287455357874553637mer-m88745534487455364140-19.42
ADediting_1391023chr8_140732605_-ENSG00000222041.11ENST00000643743.1CYTOR-223hsa-miR-151a-3pchr287607050876070567mer-m88760703787607057142-14.62
ADediting_1391023chr8_140732605_-ENSG00000222041.11ENST00000644552.1CYTOR-227hsa-miR-151a-3pchr287607050876070567mer-m88760703787607057142-14.62
ADediting_1391023chr8_140732605_-ENSG00000222041.11ENST00000644976.1CYTOR-230hsa-miR-151a-3pchr287607050876070567mer-m88760703787607057142-14.62
ADediting_1391023chr8_140732605_-ENSG00000222041.11ENST00000645707.1CYTOR-233hsa-miR-151a-3pchr287607050876070567mer-m88760703787607057142-14.62
ADediting_1471003chr9_63819626_+ENSG00000222041.11ENST00000409054.2CYTOR-202hsa-miR-4477bchr287583322875833298mer-1a8758330887583329152-11.31
ADediting_1471003chr9_63819626_+ENSG00000222041.11ENST00000409139.6CYTOR-203hsa-miR-4477bchr287583322875833298mer-1a8758330887583329152-11.31
ADediting_1471003chr9_63819626_+ENSG00000222041.11ENST00000409898.2CYTOR-204hsa-miR-4477bchr287583322875833298mer-1a8758330887583329152-11.31
ADediting_1471003chr9_63819626_+ENSG00000222041.11ENST00000603948.5CYTOR-212hsa-miR-4477bchr287583322875833298mer-1a8758330887583329152-11.31
ADediting_1471003chr9_63819626_+ENSG00000222041.11ENST00000612724.1CYTOR-213hsa-miR-4477bchr287583322875833298mer-1a8758330887583329152-11.31
ADediting_1471003chr9_63819626_+ENSG00000222041.11ENST00000629257.1CYTOR-214hsa-miR-4477bchr287583322875833298mer-1a8758330887583329152-11.31
ADediting_1471003chr9_63819626_+ENSG00000222041.11ENST00000642451.1CYTOR-216hsa-miR-4477bchr287583322875833298mer-1a8758330887583329152-11.31
ADediting_1471003chr9_63819626_+ENSG00000222041.11ENST00000642451.1CYTOR-216hsa-miR-4477bchr287584815875848217mer-m88758480187584822150-13.32
ADediting_1471003chr9_63819626_+ENSG00000222041.11ENST00000642796.1CYTOR-217hsa-miR-4477bchr287583322875833298mer-1a8758330887583329152-11.31
ADediting_1471003chr9_63819626_+ENSG00000222041.11ENST00000642872.1CYTOR-218hsa-miR-4477bchr287584815875848217mer-m88758480187584822150-13.32
ADediting_1471003chr9_63819626_+ENSG00000222041.11ENST00000643070.1CYTOR-219hsa-miR-4477bchr287583322875833298mer-1a8758330887583329152-11.31
ADediting_1471003chr9_63819626_+ENSG00000222041.11ENST00000643743.1CYTOR-223hsa-miR-4477bchr287583322875833298mer-1a8758330887583329152-11.31
ADediting_1471003chr9_63819626_+ENSG00000222041.11ENST00000644125.1CYTOR-225hsa-miR-4477bchr287583322875833298mer-1a8758330887583329152-11.31
ADediting_1471003chr9_63819626_+ENSG00000222041.11ENST00000644478.1CYTOR-226hsa-miR-4477bchr287583322875833298mer-1a8758330887583329152-11.31
ADediting_1471003chr9_63819626_+ENSG00000222041.11ENST00000646636.1CYTOR-237hsa-miR-4477bchr287583322875833298mer-1a8758330887583329152-11.31
ADediting_1471004chr9_63819627_+ENSG00000222041.11ENST00000646578.1CYTOR-236hsa-miR-4477bchr287636706876367138mer-1a8763669287636713152-11
ADediting_1471004chr9_63819627_+ENSG00000222041.11ENST00000646636.1CYTOR-237hsa-miR-4477bchr287636706876367138mer-1a8763669287636713152-11
ADediting_1535954chr14_101045974_+ENSG00000222041.11ENST00000642451.1CYTOR-216hsa-miR-381-3pchr287586780875867867mer-1a8758676587586786147-18.94
ADediting_1556067chr19_40282625_-ENSG00000222041.11ENST00000612724.1CYTOR-213hsa-miR-641chr287581878875818847mer-m88758186287581885140-15.62
ADediting_1596844chr1_162342605_+ENSG00000222041.11ENST00000642451.1CYTOR-216hsa-miR-556-3pchr287584595875846017mer-m88758458887584609142-14.9
ADediting_1596844chr1_162342605_+ENSG00000222041.11ENST00000642872.1CYTOR-218hsa-miR-556-3pchr287584595875846017mer-m88758458887584609142-14.9
ADediting_1631458chr19_40282624_-ENSG00000222041.11ENST00000644552.1CYTOR-227hsa-miR-641chr287604022876040287mer-m88760400687604029140-14.89
ADediting_1631458chr19_40282624_-ENSG00000222041.11ENST00000646865.1CYTOR-238hsa-miR-641chr287458138874581447mer-m88745812287458145155-17.8
ADediting_843620chr2_207754818_+ENSG00000222041.11ENST00000612724.1CYTOR-213hsa-miR-4775chr287581720875817278mer-1a8758170787581727166-13.45
ADediting_843620chr2_207754818_+ENSG00000222041.11ENST00000642451.1CYTOR-216hsa-miR-4775chr287586178875861847mer-m88758616587586185142-9.43
ADediting_843620chr2_207754818_+ENSG00000222041.11ENST00000642451.1CYTOR-216hsa-miR-4775chr287586847875868548mer-1a8758683387586854146-8.05
ADediting_843620chr2_207754818_+ENSG00000222041.11ENST00000642451.1CYTOR-216hsa-miR-4775chr287588796875888038mer-1a8758878287588803151-13.04
ADediting_98288chr1_32086990_+ENSG00000222041.11ENST00000414584.1CYTOR-207hsa-miR-5585-3pchr287478229874802277mer-m88747821687480228146-14.51
ADediting_98288chr1_32086990_+ENSG00000222041.11ENST00000642796.1CYTOR-217hsa-miR-5585-3pchr287629510876295178mer-1a8762949287629517146-14.8
ADediting_98288chr1_32086990_+ENSG00000222041.11ENST00000644938.1CYTOR-229hsa-miR-5585-3pchr287629510876295178mer-1a8762949287629517146-14.8
ADediting_98289chr1_32086992_+ENSG00000222041.11ENST00000642451.1CYTOR-216hsa-miR-5585-3pchr287589860875898667mer-m88758984687589867149-12.69

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
ADediting_107020chr1_37500952_-ENSG00000222041.11ENST00000642451.1CYTOR-216hsa-miR-5581-3pchr287584470875844778mer-1a8758445787584477146-20.01
ADediting_107020chr1_37500952_-ENSG00000222041.11ENST00000642872.1CYTOR-218hsa-miR-5581-3pchr287584470875844778mer-1a8758445787584477146-20.01
ADediting_107020chr1_37500952_-ENSG00000222041.11ENST00000643509.1CYTOR-221hsa-miR-5581-3pchr287517380875173878mer-1a8751736687517387140-11.91
ADediting_107020chr1_37500952_-ENSG00000222041.11ENST00000646578.1CYTOR-236hsa-miR-5581-3pchr287636332876363398mer-1a8763631887636339140-14.36
ADediting_107020chr1_37500952_-ENSG00000222041.11ENST00000646636.1CYTOR-237hsa-miR-5581-3pchr287636332876363398mer-1a8763631887636339140-14.36
ADediting_1337757chr7_5495852_-ENSG00000222041.11ENST00000642451.1CYTOR-216hsa-miR-589-3pchr287584808875848147mer-m88758479287584815150-15
ADediting_1337757chr7_5495852_-ENSG00000222041.11ENST00000642872.1CYTOR-218hsa-miR-589-3pchr287584808875848147mer-m88758479287584815150-15
ADediting_1337758chr7_5495892_-ENSG00000222041.11ENST00000642451.1CYTOR-216hsa-miR-589-5pchr287586322875863287mer-m88758630787586329143-13
ADediting_1391023chr8_140732605_-ENSG00000222041.11ENST00000642451.1CYTOR-216hsa-miR-151a-3pchr287589396875894038mer-1a8758938187589403142-13.4
ADediting_1556067chr19_40282625_-ENSG00000222041.11ENST00000331944.10CYTOR-201hsa-miR-641chr287521470875214767mer-1a8752145487521476140-14.3
ADediting_1556067chr19_40282625_-ENSG00000222041.11ENST00000413202.1CYTOR-205hsa-miR-641chr287521470875214767mer-1a8752145487521476140-14.3
ADediting_1556067chr19_40282625_-ENSG00000222041.11ENST00000414584.1CYTOR-207hsa-miR-641chr287521470875214767mer-1a8752145487521476140-14.3
ADediting_1556067chr19_40282625_-ENSG00000222041.11ENST00000642293.1CYTOR-215hsa-miR-641chr287521470875214767mer-1a8752145487521476140-14.3
ADediting_1556067chr19_40282625_-ENSG00000222041.11ENST00000642451.1CYTOR-216hsa-miR-641chr287585579875855857mer-m88758556187585586151-12.29
ADediting_1556067chr19_40282625_-ENSG00000222041.11ENST00000643321.1CYTOR-220hsa-miR-641chr287521470875214767mer-1a8752145487521476140-14.3
ADediting_1556067chr19_40282625_-ENSG00000222041.11ENST00000643509.1CYTOR-221hsa-miR-641chr287521470875214767mer-1a8752145487521476140-14.3
ADediting_1556067chr19_40282625_-ENSG00000222041.11ENST00000643589.1CYTOR-222hsa-miR-641chr287521470875214767mer-1a8752145487521476140-14.3
ADediting_1556067chr19_40282625_-ENSG00000222041.11ENST00000644040.1CYTOR-224hsa-miR-641chr287521470875214767mer-1a8752145487521476140-14.3
ADediting_1556067chr19_40282625_-ENSG00000222041.11ENST00000644577.1CYTOR-228hsa-miR-641chr287521470875214767mer-1a8752145487521476140-14.3
ADediting_1556067chr19_40282625_-ENSG00000222041.11ENST00000645138.1CYTOR-231hsa-miR-641chr287521470875214767mer-1a8752145487521476140-14.3
ADediting_1556067chr19_40282625_-ENSG00000222041.11ENST00000645729.1CYTOR-234hsa-miR-641chr287521470875214767mer-1a8752145487521476140-14.3
ADediting_1556067chr19_40282625_-ENSG00000222041.11ENST00000646386.1CYTOR-235hsa-miR-641chr287521470875214767mer-1a8752145487521476140-14.3
ADediting_1596844chr1_162342605_+ENSG00000222041.11ENST00000642451.1CYTOR-216hsa-miR-556-3pchr287589774875897818mer-1a8758975987589781151-13.99
ADediting_1631458chr19_40282624_-ENSG00000222041.11ENST00000331944.10CYTOR-201hsa-miR-641chr287521470875214767mer-1a8752145487521476140-14.3
ADediting_1631458chr19_40282624_-ENSG00000222041.11ENST00000413202.1CYTOR-205hsa-miR-641chr287521470875214767mer-1a8752145487521476140-14.3
ADediting_1631458chr19_40282624_-ENSG00000222041.11ENST00000414584.1CYTOR-207hsa-miR-641chr287521470875214767mer-1a8752145487521476140-14.3
ADediting_1631458chr19_40282624_-ENSG00000222041.11ENST00000642293.1CYTOR-215hsa-miR-641chr287521470875214767mer-1a8752145487521476140-14.3
ADediting_1631458chr19_40282624_-ENSG00000222041.11ENST00000642451.1CYTOR-216hsa-miR-641chr287585579875855857mer-m88758556187585586151-12.29
ADediting_1631458chr19_40282624_-ENSG00000222041.11ENST00000643321.1CYTOR-220hsa-miR-641chr287521470875214767mer-1a8752145487521476140-14.3
ADediting_1631458chr19_40282624_-ENSG00000222041.11ENST00000643509.1CYTOR-221hsa-miR-641chr287521470875214767mer-1a8752145487521476140-14.3
ADediting_1631458chr19_40282624_-ENSG00000222041.11ENST00000643589.1CYTOR-222hsa-miR-641chr287521470875214767mer-1a8752145487521476140-14.3
ADediting_1631458chr19_40282624_-ENSG00000222041.11ENST00000644040.1CYTOR-224hsa-miR-641chr287521470875214767mer-1a8752145487521476140-14.3
ADediting_1631458chr19_40282624_-ENSG00000222041.11ENST00000644577.1CYTOR-228hsa-miR-641chr287521470875214767mer-1a8752145487521476140-14.3
ADediting_1631458chr19_40282624_-ENSG00000222041.11ENST00000645138.1CYTOR-231hsa-miR-641chr287521470875214767mer-1a8752145487521476140-14.3
ADediting_1631458chr19_40282624_-ENSG00000222041.11ENST00000645729.1CYTOR-234hsa-miR-641chr287521470875214767mer-1a8752145487521476140-14.3
ADediting_1631458chr19_40282624_-ENSG00000222041.11ENST00000646386.1CYTOR-235hsa-miR-641chr287521470875214767mer-1a8752145487521476140-14.3
ADediting_286380chr11_79422188_-ENSG00000222041.11ENST00000642451.1CYTOR-216hsa-miR-5579-3pchr287585032875850387mer-m88758501987585039149-13.06
ADediting_286380chr11_79422188_-ENSG00000222041.11ENST00000642872.1CYTOR-218hsa-miR-5579-3pchr287585032875850387mer-m88758501987585039149-13.06
ADediting_286380chr11_79422188_-ENSG00000222041.11ENST00000644976.1CYTOR-230hsa-miR-5579-3pchr287585032875850387mer-m88758501987585039149-13.06
ADediting_291761chr11_93733708_-ENSG00000222041.11ENST00000643070.1CYTOR-219hsa-miR-1304-3pchr287573155875731617mer-m88757314087573162151-18.97
ADediting_496066chr15_66496985_-ENSG00000222041.11ENST00000409139.6CYTOR-203hsa-miR-4512chr287607154876071607mer-m88760713787607161145-21.81
ADediting_496066chr15_66496985_-ENSG00000222041.11ENST00000642872.1CYTOR-218hsa-miR-4512chr287607154876071607mer-m88760713787607161145-21.81
ADediting_496066chr15_66496985_-ENSG00000222041.11ENST00000643070.1CYTOR-219hsa-miR-4512chr287607154876071607mer-m88760713787607161145-21.81
ADediting_496066chr15_66496985_-ENSG00000222041.11ENST00000643743.1CYTOR-223hsa-miR-4512chr287607154876071607mer-m88760713787607161145-21.81
ADediting_496066chr15_66496985_-ENSG00000222041.11ENST00000644125.1CYTOR-225hsa-miR-4512chr287626692876266987mer-m88760676887626699145-20.87
ADediting_496066chr15_66496985_-ENSG00000222041.11ENST00000644478.1CYTOR-226hsa-miR-4512chr287626692876266987mer-m88760676887626699145-20.87
ADediting_496066chr15_66496985_-ENSG00000222041.11ENST00000644552.1CYTOR-227hsa-miR-4512chr287607154876071607mer-m88760713787607161145-21.81
ADediting_496066chr15_66496985_-ENSG00000222041.11ENST00000644976.1CYTOR-230hsa-miR-4512chr287607154876071607mer-m88760713787607161145-21.81
ADediting_496066chr15_66496985_-ENSG00000222041.11ENST00000645707.1CYTOR-233hsa-miR-4512chr287607154876071607mer-m88760713787607161145-21.81
ADediting_527135chr16_24203190_+ENSG00000222041.11ENST00000414030.6CYTOR-206hsa-miR-1273h-3pchr287480410874804167mer-m88748039687480417140-11.35
ADediting_527135chr16_24203190_+ENSG00000222041.11ENST00000414584.1CYTOR-207hsa-miR-1273h-3pchr287480410874804167mer-m88748039687480417140-11.35
ADediting_527135chr16_24203190_+ENSG00000222041.11ENST00000455131.5CYTOR-211hsa-miR-1273h-3pchr287480410874804167mer-m88748039687480417140-11.35
ADediting_527135chr16_24203190_+ENSG00000222041.11ENST00000645138.1CYTOR-231hsa-miR-1273h-3pchr287480410874804167mer-m88748039687480417140-11.35
ADediting_98288chr1_32086990_+ENSG00000222041.11ENST00000409139.6CYTOR-203hsa-miR-5585-3pchr287606681876066877mer-m88760666787606688142-15.42
ADediting_98288chr1_32086990_+ENSG00000222041.11ENST00000409898.2CYTOR-204hsa-miR-5585-3pchr287606681876066877mer-m88760666787606688142-15.42
ADediting_98288chr1_32086990_+ENSG00000222041.11ENST00000642796.1CYTOR-217hsa-miR-5585-3pchr287606681876066877mer-m88760666787606688142-15.42
ADediting_98288chr1_32086990_+ENSG00000222041.11ENST00000642872.1CYTOR-218hsa-miR-5585-3pchr287606681876066877mer-m88760666787606688142-15.42
ADediting_98288chr1_32086990_+ENSG00000222041.11ENST00000643070.1CYTOR-219hsa-miR-5585-3pchr287606681876066877mer-m88760666787606688142-15.42
ADediting_98288chr1_32086990_+ENSG00000222041.11ENST00000643743.1CYTOR-223hsa-miR-5585-3pchr287606681876066877mer-m88760666787606688142-15.42
ADediting_98288chr1_32086990_+ENSG00000222041.11ENST00000644125.1CYTOR-225hsa-miR-5585-3pchr287606681876066877mer-m88758334287606688149-19.32
ADediting_98288chr1_32086990_+ENSG00000222041.11ENST00000644478.1CYTOR-226hsa-miR-5585-3pchr287606681876066877mer-m88760666787606688142-15.42
ADediting_98288chr1_32086990_+ENSG00000222041.11ENST00000644552.1CYTOR-227hsa-miR-5585-3pchr287606681876066877mer-m88760666787606688142-15.42
ADediting_98288chr1_32086990_+ENSG00000222041.11ENST00000644938.1CYTOR-229hsa-miR-5585-3pchr287606681876066877mer-m88760666787606688142-15.42
ADediting_98288chr1_32086990_+ENSG00000222041.11ENST00000644976.1CYTOR-230hsa-miR-5585-3pchr287606681876066877mer-m88760666787606688142-15.42
ADediting_98288chr1_32086990_+ENSG00000222041.11ENST00000645707.1CYTOR-233hsa-miR-5585-3pchr287606681876066877mer-m88760666787606688142-15.42
ADediting_98288chr1_32086990_+ENSG00000222041.11ENST00000646578.1CYTOR-236hsa-miR-5585-3pchr287606681876066877mer-m88760666787606688142-15.42
ADediting_98288chr1_32086990_+ENSG00000222041.11ENST00000646636.1CYTOR-237hsa-miR-5585-3pchr287606681876066877mer-m88760666787606688142-15.42
ADediting_98289chr1_32086992_+ENSG00000222041.11ENST00000409139.6CYTOR-203hsa-miR-5585-3pchr287606681876066877mer-m88760666787606688142-15.42
ADediting_98289chr1_32086992_+ENSG00000222041.11ENST00000409898.2CYTOR-204hsa-miR-5585-3pchr287606681876066877mer-m88760666787606688142-15.42
ADediting_98289chr1_32086992_+ENSG00000222041.11ENST00000642796.1CYTOR-217hsa-miR-5585-3pchr287606681876066877mer-m88760666787606688142-15.42
ADediting_98289chr1_32086992_+ENSG00000222041.11ENST00000642872.1CYTOR-218hsa-miR-5585-3pchr287606681876066877mer-m88760666787606688142-15.42
ADediting_98289chr1_32086992_+ENSG00000222041.11ENST00000643070.1CYTOR-219hsa-miR-5585-3pchr287606681876066877mer-m88760666787606688142-15.42
ADediting_98289chr1_32086992_+ENSG00000222041.11ENST00000643743.1CYTOR-223hsa-miR-5585-3pchr287606681876066877mer-m88760666787606688142-15.42
ADediting_98289chr1_32086992_+ENSG00000222041.11ENST00000644125.1CYTOR-225hsa-miR-5585-3pchr287606681876066877mer-m88758334287606688149-19.32
ADediting_98289chr1_32086992_+ENSG00000222041.11ENST00000644478.1CYTOR-226hsa-miR-5585-3pchr287606681876066877mer-m88760666787606688142-15.42
ADediting_98289chr1_32086992_+ENSG00000222041.11ENST00000644552.1CYTOR-227hsa-miR-5585-3pchr287606681876066877mer-m88760666787606688142-15.42
ADediting_98289chr1_32086992_+ENSG00000222041.11ENST00000644938.1CYTOR-229hsa-miR-5585-3pchr287606681876066877mer-m88760666787606688142-15.42
ADediting_98289chr1_32086992_+ENSG00000222041.11ENST00000644976.1CYTOR-230hsa-miR-5585-3pchr287606681876066877mer-m88760666787606688142-15.42
ADediting_98289chr1_32086992_+ENSG00000222041.11ENST00000645707.1CYTOR-233hsa-miR-5585-3pchr287606681876066877mer-m88760666787606688142-15.42
ADediting_98289chr1_32086992_+ENSG00000222041.11ENST00000646578.1CYTOR-236hsa-miR-5585-3pchr287606681876066877mer-m88760666787606688142-15.42
ADediting_98289chr1_32086992_+ENSG00000222041.11ENST00000646636.1CYTOR-237hsa-miR-5585-3pchr287606681876066877mer-m88760666787606688142-15.42

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
ADeditom_IDPositionENSGENSTTranscript namemiRNA IDChromosomeTargtTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for CYTOR

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in miRNA.
ADeditom_IDENSTmir_IDEditing_InformationEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

check button RNA A-to-I editing in mRNA.
ADeditom_IDENSTEditing_InformationEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

check button RNA A-to-I editing in lncRNA.
ADeditom_IDENSTEditing_InformationEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for CYTOR

check button Correlation between ADAR gene expression and RNA editing frequency
TissueADeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)

check button Correlation between ADAR gene expression and this gene's expression
TissueADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
DLPFC6.32834150364439e-310.593804884427851.09963754614868e-340.6227442826888380.002235723785812840.173013059131675
AC1.14648952072023e-580.8070361297195645.30694408428312e-560.7960240713182561.03706135894926e-060.303140709960858
PCC1.11970913267774e-160.5527890276942031.18265828115466e-190.594699606762020.9685778820575710.00286913090642272
TCX0.0002629904753156210.2938151269872752.86589426572788e-070.4043762952623571.95620094385249e-05-0.340976675981267
FP1.2738030896704e-160.568418588084953.96128186743131e-170.5761300725891050.3211555935152760.0747826691555064
IFG0.0001205117743430330.693650273307121.04987287768955e-070.8453138202180020.889326872364380.0293267128503049
PG1.09976589277465e-210.6266598781263241.18988165949454e-210.6262481391138010.0728923337324486-0.131820288965047
STG1.93971018809208e-110.65146676122583.07684254298832e-070.5242942225526770.7659207048370990.0329685327755693

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Relation with AD stages for CYTOR

check button Correlation between AD stages and RNA editing frequency
TissueADeditomIDpositionP-valCoeff.

check button Correlation between AD stages and this gene's expression
TissueP-valCoeff.

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RelatedDrugs for CYTOR

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.0 2018-04-02)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for CYTOR

check button Diseases associated with this gene.
(DisGeNet 4.0)
GeneDisease IDDisease name# pubmedsSource